Gene annotation
Transcriptome id Sobic.001G476000.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QQ03
Pfam -
Panther DB PTHR35164 PTHR35164:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G40020 : Myosin heavy chain-related protein
RAP-DB (Rice) LOC_Os03g08980.1 : expressed protein
MaizeGDB (Corn) Zm00025a001025 , Zm00025a053220
Brachypodium PNT78004
Barley HORVU4Hr1G078470.9 , HORVU5Hr1G034130.1 , HORVU5Hr1G075560.1 , HORVU5Hr1G075560.2 , HORVU7Hr1G029090.1 , HORVU4Hr1G078470.12
Wheat TraesCS4B02G305500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G177600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@armadillo/beta-catenin repeat family protein, putative, expressed -
2 Sobic.001G488300 - -
3 Sobic.008G108300 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
4 Sobic.003G118650 - -
5 Sobic.002G002000 expressed protein -
6 Sobic.004G242800 - -
7 Sobic.001G167000 HEAT repeat family protein, putative, expressed K11492: NCAPG2, condensin-2 complex subunit G2
8 Sobic.010G196466 - -
9 Sobic.002G012100 cytokinin inducible protein, putative, expressed -
10 Sobic.006G244200 OsFBDUF42 - F-box and DUF domain containing protein, expressed -
11 Sobic.006G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat protein PPR868-14, putative, expressed -
12 Sobic.006G131700 CRS1/YhbY domain containing protein, putative, expressed -
13 Sobic.001G182800 disease resistance RPP13-like protein 1, putative, expressed -
14 Sobic.005G156450 - -
15 Sobic.003G113100 OsFBX320 - F-box domain containing protein, expressed -
16 Sobic.003G218950 - -
17 Sobic.001G182700 disease resistance RPP13-like protein 1, putative, expressed -
18 Sobic.001G270800 ras-related protein, putative, expressed K07933: Rab-like protein 3
19 Sobic.002G165200 - -
20 Sobic.003G412500 - -


Gene co-expression network
sample Sobic001G476000 Sobic001G476000 Sobic007G177600 Sobic007G177600 Sobic001G476000--Sobic007G177600 Sobic001G488300 Sobic001G488300 Sobic001G476000--Sobic001G488300 Sobic008G108300 Sobic008G108300 Sobic001G476000--Sobic008G108300 Sobic003G118650 Sobic003G118650 Sobic001G476000--Sobic003G118650 Sobic002G002000 Sobic002G002000 Sobic001G476000--Sobic002G002000 Sobic004G242800 Sobic004G242800 Sobic001G476000--Sobic004G242800 Sobic001G167000 Sobic001G167000 Sobic001G476000--Sobic001G167000 Sobic010G196466 Sobic010G196466 Sobic001G476000--Sobic010G196466 Sobic002G012100 Sobic002G012100 Sobic001G476000--Sobic002G012100 Sobic007G177600--Sobic001G476000 Sobic007G177600--Sobic002G002000 Sobic007G177600--Sobic003G118650 Sobic006G143800 Sobic006G143800 Sobic007G177600--Sobic006G143800 Sobic004G308600 Sobic004G308600 Sobic007G177600--Sobic004G308600 Sobic004G044401 Sobic004G044401 Sobic007G177600--Sobic004G044401 Sobic006G244200 Sobic006G244200 Sobic007G177600--Sobic006G244200 Sobic001G410400 Sobic001G410400 Sobic007G177600--Sobic001G410400 Sobic007G177600--Sobic008G108300 Sobic008G024900 Sobic008G024900 Sobic001G488300--Sobic008G024900 Sobic001G488300--Sobic001G476000 Sobic005G156450 Sobic005G156450 Sobic001G488300--Sobic005G156450 Sobic001G488300--Sobic006G143800 Sobic004G104200 Sobic004G104200 Sobic001G488300--Sobic004G104200 Sobic003G113100 Sobic003G113100 Sobic001G488300--Sobic003G113100 Sobic001G488300--Sobic002G002000 Sobic004G282933 Sobic004G282933 Sobic001G488300--Sobic004G282933 Sobic006G192600 Sobic006G192600 Sobic001G488300--Sobic006G192600 Sobic002G165200 Sobic002G165200 Sobic008G108300--Sobic002G165200 Sobic001G182800 Sobic001G182800 Sobic008G108300--Sobic001G182800 Sobic008G108300--Sobic006G192600 Sobic003G393600 Sobic003G393600 Sobic008G108300--Sobic003G393600 Sobic010G185250 Sobic010G185250 Sobic008G108300--Sobic010G185250 Sobic010G254000 Sobic010G254000 Sobic008G108300--Sobic010G254000 Sobic003G218950 Sobic003G218950 Sobic008G108300--Sobic003G218950 Sobic003G369533 Sobic003G369533 Sobic008G108300--Sobic003G369533 Sobic001G182700 Sobic001G182700 Sobic008G108300--Sobic001G182700 Sobic004G346800 Sobic004G346800 Sobic003G118650--Sobic004G346800 Sobic001G134900 Sobic001G134900 Sobic003G118650--Sobic001G134900 Sobic003G118650--Sobic006G143800 Sobic003G118650--Sobic002G002000 Sobic003G288500 Sobic003G288500 Sobic003G118650--Sobic003G288500 Sobic003G079725 Sobic003G079725 Sobic003G118650--Sobic003G079725 Sobic006G017266 Sobic006G017266 Sobic003G118650--Sobic006G017266 Sobic001G045500 Sobic001G045500 Sobic003G118650--Sobic001G045500 Sobic009G069450 Sobic009G069450 Sobic003G118650--Sobic009G069450 Sobic004G272500 Sobic004G272500 Sobic002G002000--Sobic004G272500 Sobic002G002000--Sobic006G192600 Sobic005G101400 Sobic005G101400 Sobic002G002000--Sobic005G101400 Sobic004G337600 Sobic004G337600 Sobic002G002000--Sobic004G337600 Sobic002G044500 Sobic002G044500 Sobic002G002000--Sobic002G044500 Sobic002G149966 Sobic002G149966 Sobic002G002000--Sobic002G149966 Sobic002G150032 Sobic002G150032 Sobic002G002000--Sobic002G150032 Sobic003G168500 Sobic003G168500 Sobic002G002000--Sobic003G168500 Sobic003G172850 Sobic003G172850 Sobic002G002000--Sobic003G172850 Sobic004G242800--Sobic001G167000 Sobic004G242800--Sobic002G012100 Sobic004G206600 Sobic004G206600 Sobic004G242800--Sobic004G206600 Sobic004G242800--Sobic010G196466 Sobic009G175800 Sobic009G175800 Sobic004G242800--Sobic009G175800 Sobic001G270800 Sobic001G270800 Sobic004G242800--Sobic001G270800 Sobic003G330350 Sobic003G330350 Sobic004G242800--Sobic003G330350 Sobic009G102250 Sobic009G102250 Sobic004G242800--Sobic009G102250 Sobic009G087540 Sobic009G087540 Sobic004G242800--Sobic009G087540 Sobic001G167000--Sobic002G012100 Sobic001G167000--Sobic004G242800 Sobic001G167000--Sobic001G270800 Sobic001G167000--Sobic001G182800 Sobic001G167000--Sobic003G330350 Sobic004G299850 Sobic004G299850 Sobic001G167000--Sobic004G299850 Sobic003G064901 Sobic003G064901 Sobic001G167000--Sobic003G064901 Sobic001G167000--Sobic010G196466 Sobic001G167000--Sobic009G102250 Sobic010G196466--Sobic004G206600 Sobic007G141900 Sobic007G141900 Sobic010G196466--Sobic007G141900 Sobic010G196466--Sobic002G012100 Sobic010G196466--Sobic001G167000 Sobic002G324801 Sobic002G324801 Sobic010G196466--Sobic002G324801 Sobic003G267200 Sobic003G267200 Sobic010G196466--Sobic003G267200 Sobic002G009000 Sobic002G009000 Sobic010G196466--Sobic002G009000 Sobic010G196466--Sobic004G242800 Sobic008G072800 Sobic008G072800 Sobic010G196466--Sobic008G072800 Sobic002G012100--Sobic007G141900 Sobic002G012100--Sobic001G167000 Sobic002G012100--Sobic008G072800 Sobic002G012100--Sobic004G206600 Sobic008G067000 Sobic008G067000 Sobic002G012100--Sobic008G067000 Sobic002G012100--Sobic004G242800 Sobic002G012100--Sobic010G196466 Sobic009G064300 Sobic009G064300 Sobic002G012100--Sobic009G064300 Sobic003G023450 Sobic003G023450 Sobic002G012100--Sobic003G023450
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.