Gene annotation
Transcriptome id Sobic.007G177600.1
Synonym Sb07g024930, ARO1
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
armadillo/beta-catenin repeat family protein, putative, expressed
UniProt C5YH36
Pfam -
Panther DB PTHR23315 PTHR23315:SF110
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34940 : armadillo repeat only 1
RAP-DB (Rice) LOC_Os08g43500.1 : armadillo/beta-catenin repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a049348 , Zm00025a017967 , Zm00025a014454 , Zm00025a034212 , Zm00025a005692
Brachypodium KQJ99292 , KQJ91227
Barley HORVU5Hr1G083170.3 , HORVU5Hr1G083170.1 , HORVU0Hr1G021240.4 , HORVU0Hr1G021240.1 , HORVU0Hr1G021240.3 , HORVU0Hr1G021240.2 , HORVU5Hr1G083170.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G476000 expressed protein -
2 Sobic.002G002000 expressed protein -
3 Sobic.003G118650 - -
4 Sobic.006G143800 - -
5 Sobic.004G308600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
6 Sobic.004G044401 - -
7 Sobic.006G244200 OsFBDUF42 - F-box and DUF domain containing protein, expressed -
8 Sobic.001G410400 - -
9 Sobic.008G108300 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
10 Sobic.006G145650 - -
11 Sobic.001G129200 receptor protein kinase TMK1 precursor, putative, expressed -
12 Sobic.006G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat protein PPR868-14, putative, expressed -
13 Sobic.001G134900 exostosin, putative, expressed -
14 Sobic.006G102200 GPI transamidase component family protein, putative, expressed -
15 Sobic.003G137300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LOI1, putative, expressed -
16 Sobic.007G217200 (28.4% identity with SbCCoAOMT/37.4% similarity) unlikely to have any significant CCoAOMT activity.(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed -
17 Sobic.001G073550 - -
18 Sobic.004G145550 - -
19 Sobic.004G320900 - -
20 Sobic.001G039750 - -


Gene co-expression network
sample Sobic007G177600 Sobic007G177600 Sobic001G476000 Sobic001G476000 Sobic007G177600--Sobic001G476000 Sobic002G002000 Sobic002G002000 Sobic007G177600--Sobic002G002000 Sobic003G118650 Sobic003G118650 Sobic007G177600--Sobic003G118650 Sobic006G143800 Sobic006G143800 Sobic007G177600--Sobic006G143800 Sobic004G308600 Sobic004G308600 Sobic007G177600--Sobic004G308600 Sobic004G044401 Sobic004G044401 Sobic007G177600--Sobic004G044401 Sobic006G244200 Sobic006G244200 Sobic007G177600--Sobic006G244200 Sobic001G410400 Sobic001G410400 Sobic007G177600--Sobic001G410400 Sobic008G108300 Sobic008G108300 Sobic007G177600--Sobic008G108300 Sobic001G476000--Sobic007G177600 Sobic001G488300 Sobic001G488300 Sobic001G476000--Sobic001G488300 Sobic001G476000--Sobic008G108300 Sobic001G476000--Sobic003G118650 Sobic001G476000--Sobic002G002000 Sobic004G242800 Sobic004G242800 Sobic001G476000--Sobic004G242800 Sobic001G167000 Sobic001G167000 Sobic001G476000--Sobic001G167000 Sobic010G196466 Sobic010G196466 Sobic001G476000--Sobic010G196466 Sobic002G012100 Sobic002G012100 Sobic001G476000--Sobic002G012100 Sobic004G272500 Sobic004G272500 Sobic002G002000--Sobic004G272500 Sobic006G192600 Sobic006G192600 Sobic002G002000--Sobic006G192600 Sobic005G101400 Sobic005G101400 Sobic002G002000--Sobic005G101400 Sobic004G337600 Sobic004G337600 Sobic002G002000--Sobic004G337600 Sobic002G044500 Sobic002G044500 Sobic002G002000--Sobic002G044500 Sobic002G149966 Sobic002G149966 Sobic002G002000--Sobic002G149966 Sobic002G150032 Sobic002G150032 Sobic002G002000--Sobic002G150032 Sobic003G168500 Sobic003G168500 Sobic002G002000--Sobic003G168500 Sobic003G172850 Sobic003G172850 Sobic002G002000--Sobic003G172850 Sobic004G346800 Sobic004G346800 Sobic003G118650--Sobic004G346800 Sobic001G134900 Sobic001G134900 Sobic003G118650--Sobic001G134900 Sobic003G118650--Sobic006G143800 Sobic003G118650--Sobic002G002000 Sobic003G288500 Sobic003G288500 Sobic003G118650--Sobic003G288500 Sobic003G079725 Sobic003G079725 Sobic003G118650--Sobic003G079725 Sobic006G017266 Sobic006G017266 Sobic003G118650--Sobic006G017266 Sobic001G045500 Sobic001G045500 Sobic003G118650--Sobic001G045500 Sobic009G069450 Sobic009G069450 Sobic003G118650--Sobic009G069450 Sobic006G143800--Sobic003G288500 Sobic003G119750 Sobic003G119750 Sobic006G143800--Sobic003G119750 Sobic003G354166 Sobic003G354166 Sobic006G143800--Sobic003G354166 Sobic001G293900 Sobic001G293900 Sobic006G143800--Sobic001G293900 Sobic006G143800--Sobic006G192600 Sobic008G157700 Sobic008G157700 Sobic006G143800--Sobic008G157700 Sobic006G143800--Sobic002G002000 Sobic003G168800 Sobic003G168800 Sobic006G143800--Sobic003G168800 Sobic007G004750 Sobic007G004750 Sobic006G143800--Sobic007G004750 Sobic002G275400 Sobic002G275400 Sobic004G308600--Sobic002G275400 Sobic004G125600 Sobic004G125600 Sobic004G308600--Sobic004G125600 Sobic004G125701 Sobic004G125701 Sobic004G308600--Sobic004G125701 Sobic004G208000 Sobic004G208000 Sobic004G308600--Sobic004G208000 Sobic007G099300 Sobic007G099300 Sobic004G308600--Sobic007G099300 Sobic003G386400 Sobic003G386400 Sobic004G308600--Sobic003G386400 Sobic004G192001 Sobic004G192001 Sobic004G308600--Sobic004G192001 Sobic004G160350 Sobic004G160350 Sobic004G308600--Sobic004G160350 Sobic004G308600--Sobic004G044401 Sobic009G029100 Sobic009G029100 Sobic004G044401--Sobic009G029100 Sobic001G523150 Sobic001G523150 Sobic004G044401--Sobic001G523150 Sobic003G166400 Sobic003G166400 Sobic004G044401--Sobic003G166400 Sobic002G270733 Sobic002G270733 Sobic004G044401--Sobic002G270733 Sobic007G052500 Sobic007G052500 Sobic004G044401--Sobic007G052500 Sobic004G044401--Sobic004G337600 Sobic008G039200 Sobic008G039200 Sobic004G044401--Sobic008G039200 Sobic005G126900 Sobic005G126900 Sobic004G044401--Sobic005G126900 Sobic002G165200 Sobic002G165200 Sobic004G044401--Sobic002G165200 Sobic004G145550 Sobic004G145550 Sobic006G244200--Sobic004G145550 Sobic009G143600 Sobic009G143600 Sobic006G244200--Sobic009G143600 Sobic003G384750 Sobic003G384750 Sobic006G244200--Sobic003G384750 Sobic001G520600 Sobic001G520600 Sobic006G244200--Sobic001G520600 Sobic010G093200 Sobic010G093200 Sobic006G244200--Sobic010G093200 Sobic002G375200 Sobic002G375200 Sobic006G244200--Sobic002G375200 Sobic007G113101 Sobic007G113101 Sobic006G244200--Sobic007G113101 Sobic006G252800 Sobic006G252800 Sobic006G244200--Sobic006G252800 Sobic002G408400 Sobic002G408400 Sobic006G244200--Sobic002G408400 Sobic001G129200 Sobic001G129200 Sobic001G410400--Sobic001G129200 Sobic009G206150 Sobic009G206150 Sobic001G410400--Sobic009G206150 Sobic006G087250 Sobic006G087250 Sobic001G410400--Sobic006G087250 Sobic003G137300 Sobic003G137300 Sobic001G410400--Sobic003G137300 Sobic006G145650 Sobic006G145650 Sobic001G410400--Sobic006G145650 Sobic007G226300 Sobic007G226300 Sobic001G410400--Sobic007G226300 Sobic001G410400--Sobic004G346800 Sobic007G135301 Sobic007G135301 Sobic001G410400--Sobic007G135301 Sobic001G039750 Sobic001G039750 Sobic001G410400--Sobic001G039750 Sobic008G108300--Sobic002G165200 Sobic001G182800 Sobic001G182800 Sobic008G108300--Sobic001G182800 Sobic008G108300--Sobic006G192600 Sobic003G393600 Sobic003G393600 Sobic008G108300--Sobic003G393600 Sobic010G185250 Sobic010G185250 Sobic008G108300--Sobic010G185250 Sobic010G254000 Sobic010G254000 Sobic008G108300--Sobic010G254000 Sobic003G218950 Sobic003G218950 Sobic008G108300--Sobic003G218950 Sobic003G369533 Sobic003G369533 Sobic008G108300--Sobic003G369533 Sobic001G182700 Sobic001G182700 Sobic008G108300--Sobic001G182700
Octagon: transcription factors


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