Gene annotation
Transcriptome id Sobic.001G479000.1
Synonym
Functional annotation -
UniProt A0A1B6QQ47
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G079600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G333150 - -
3 Sobic.003G271500 expressed protein -
4 Sobic.002G044800 SAM dependent carboxyl methyltransferase, putative, expressed -
5 Sobic.010G113600 vignain precursor, putative, expressed -
6 Sobic.006G190700 - -
7 Sobic.004G239200 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
8 Sobic.004G240600 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
9 Sobic.003G364950 - -
10 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
11 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
12 Sobic.005G203100 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
13 Sobic.009G139700 - -
14 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
15 Sobic.002G346100 - -
16 Sobic.001G341550 - -
17 Sobic.004G023500 GATA zinc finger domain containing protein, expressed -
18 Sobic.007G065800 Cupin domain containing protein, expressed -
19 Sobic.007G065900 Cupin domain containing protein, expressed -
20 Sobic.003G155600 exo70 exocyst complex subunit family protein, putative, expressed -


Gene co-expression network
sample Sobic001G479000 Sobic001G479000 Sobic010G079600 Sobic010G079600 Sobic001G479000--Sobic010G079600 Sobic004G333150 Sobic004G333150 Sobic001G479000--Sobic004G333150 Sobic003G271500 Sobic003G271500 Sobic001G479000--Sobic003G271500 Sobic002G044800 Sobic002G044800 Sobic001G479000--Sobic002G044800 Sobic010G113600 Sobic010G113600 Sobic001G479000--Sobic010G113600 Sobic006G190700 Sobic006G190700 Sobic001G479000--Sobic006G190700 Sobic004G239200 Sobic004G239200 Sobic001G479000--Sobic004G239200 Sobic004G240600 Sobic004G240600 Sobic001G479000--Sobic004G240600 Sobic003G364950 Sobic003G364950 Sobic001G479000--Sobic003G364950 Sobic007G170000 Sobic007G170000 Sobic010G079600--Sobic007G170000 Sobic003G364100 Sobic003G364100 Sobic010G079600--Sobic003G364100 Sobic010G079600--Sobic002G044800 Sobic001G256200 Sobic001G256200 Sobic010G079600--Sobic001G256200 Sobic009G196400 Sobic009G196400 Sobic010G079600--Sobic009G196400 Sobic010G079600--Sobic004G333150 Sobic002G421800 Sobic002G421800 Sobic010G079600--Sobic002G421800 Sobic004G273400 Sobic004G273400 Sobic010G079600--Sobic004G273400 Sobic006G113500 Sobic006G113500 Sobic010G079600--Sobic006G113500 Sobic004G333150--Sobic004G240600 Sobic010G052700 Sobic010G052700 Sobic004G333150--Sobic010G052700 Sobic003G087300 Sobic003G087300 Sobic004G333150--Sobic003G087300 Sobic009G106800 Sobic009G106800 Sobic004G333150--Sobic009G106800 Sobic005G203100 Sobic005G203100 Sobic004G333150--Sobic005G203100 Sobic004G333150--Sobic004G273400 Sobic004G333150--Sobic002G421800 Sobic004G333150--Sobic009G196400 Sobic001G100700 Sobic001G100700 Sobic004G333150--Sobic001G100700 Sobic009G217700 Sobic009G217700 Sobic003G271500--Sobic009G217700 Sobic003G271500--Sobic010G113600 Sobic003G271500--Sobic010G052700 Sobic003G364000 Sobic003G364000 Sobic003G271500--Sobic003G364000 Sobic009G139700 Sobic009G139700 Sobic003G271500--Sobic009G139700 Sobic004G107700 Sobic004G107700 Sobic003G271500--Sobic004G107700 Sobic003G255200 Sobic003G255200 Sobic003G271500--Sobic003G255200 Sobic003G240600 Sobic003G240600 Sobic003G271500--Sobic003G240600 Sobic003G155600 Sobic003G155600 Sobic003G271500--Sobic003G155600 Sobic010G226400 Sobic010G226400 Sobic002G044800--Sobic010G226400 Sobic002G044800--Sobic004G333150 Sobic002G044800--Sobic004G240600 Sobic009G021900 Sobic009G021900 Sobic002G044800--Sobic009G021900 Sobic002G389301 Sobic002G389301 Sobic002G044800--Sobic002G389301 Sobic002G040900 Sobic002G040900 Sobic002G044800--Sobic002G040900 Sobic002G044800--Sobic009G196400 Sobic009G009700 Sobic009G009700 Sobic002G044800--Sobic009G009700 Sobic002G044800--Sobic003G087300 Sobic007G065900 Sobic007G065900 Sobic010G113600--Sobic007G065900 Sobic010G113600--Sobic009G217700 Sobic010G113600--Sobic003G271500 Sobic010G113600--Sobic009G139700 Sobic010G113600--Sobic003G364000 Sobic008G157800 Sobic008G157800 Sobic010G113600--Sobic008G157800 Sobic005G005600 Sobic005G005600 Sobic010G113600--Sobic005G005600 Sobic003G319700 Sobic003G319700 Sobic010G113600--Sobic003G319700 Sobic010G088700 Sobic010G088700 Sobic010G113600--Sobic010G088700 Sobic006G190700--Sobic004G240600 Sobic002G139300 Sobic002G139300 Sobic006G190700--Sobic002G139300 Sobic006G190700--Sobic010G052700 Sobic006G214600 Sobic006G214600 Sobic006G190700--Sobic006G214600 Sobic006G190700--Sobic004G333150 Sobic001G333400 Sobic001G333400 Sobic006G190700--Sobic001G333400 Sobic005G011200 Sobic005G011200 Sobic006G190700--Sobic005G011200 Sobic003G280200 Sobic003G280200 Sobic006G190700--Sobic003G280200 Sobic008G158100 Sobic008G158100 Sobic006G190700--Sobic008G158100 Sobic002G328250 Sobic002G328250 Sobic004G239200--Sobic002G328250 Sobic006G099100 Sobic006G099100 Sobic004G239200--Sobic006G099100 Sobic010G124300 Sobic010G124300 Sobic004G239200--Sobic010G124300 Sobic004G239200--Sobic007G170000 Sobic004G239200--Sobic004G240600 Sobic009G161300 Sobic009G161300 Sobic004G239200--Sobic009G161300 Sobic004G239200--Sobic006G190700 Sobic004G239200--Sobic010G079600 Sobic002G130601 Sobic002G130601 Sobic004G239200--Sobic002G130601 Sobic004G240600--Sobic006G190700 Sobic004G240600--Sobic004G333150 Sobic004G240600--Sobic002G139300 Sobic004G240600--Sobic009G196400 Sobic004G240600--Sobic010G052700 Sobic004G240600--Sobic001G333400 Sobic004G240600--Sobic005G011200 Sobic004G240600--Sobic009G106800 Sobic004G240600--Sobic008G158100 Sobic003G364950--Sobic006G214600 Sobic010G043900 Sobic010G043900 Sobic003G364950--Sobic010G043900 Sobic004G292001 Sobic004G292001 Sobic003G364950--Sobic004G292001 Sobic004G278400 Sobic004G278400 Sobic003G364950--Sobic004G278400 Sobic005G213500 Sobic005G213500 Sobic003G364950--Sobic005G213500 Sobic003G364300 Sobic003G364300 Sobic003G364950--Sobic003G364300 Sobic002G422300 Sobic002G422300 Sobic003G364950--Sobic002G422300 Sobic003G364950--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic003G364950--Sobic002G004900
Octagon: transcription factors


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