Gene annotation
Transcriptome id Sobic.001G498500.1
Synonym Sb01g046580, PSAT
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
aminotransferase, putative, expressed
UniProt C5WWZ1
Pfam PF00266
Panther DB PTHR21152 PTHR21152:SF1
NCBI CDD -
KEGG Orthology K00831; serC, phosphoserine aminotransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35630 : phosphoserine aminotransferase
RAP-DB (Rice) LOC_Os03g06200.1 : aminotransferase, putative, expressed
MaizeGDB (Corn) Zm00025a000727
Brachypodium KQK23560
Barley HORVU4Hr1G072880.2 , HORVU4Hr1G072910.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G498500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G009300 methyltransferase domain containing protein, putative, expressed K06127: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
2 Sobic.002G113800 spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
3 Sobic.007G148700 exo70 exocyst complex subunit, putative, expressed -
4 Sobic.001G409900 transporter, putative, expressed -
5 Sobic.001G408100 Yip1 domain containing protein, expressed -
6 Sobic.003G217100 Yip1 domain containing protein, expressed -
7 Sobic.001G304500 scarecrow, putative, expressed -
8 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
9 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
10 Sobic.004G025300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
11 Sobic.001G444300 expressed protein -
12 Sobic.009G238800 expressed protein -
13 Sobic.003G428200 MEMO1, putative, expressed K06990: MEMO1 family protein
14 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
15 Sobic.006G114400 OsGrx_S15.2 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin
16 Sobic.010G236500 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.002G214900 polygalacturonase, putative, expressed -
18 Sobic.006G232000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
19 Sobic.009G117200 expressed protein -
20 Sobic.001G542900 uncharacterized Cys-rich domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G498500 Sobic001G498500 Sobic003G009300 Sobic003G009300 Sobic001G498500--Sobic003G009300 Sobic002G113800 Sobic002G113800 Sobic001G498500--Sobic002G113800 Sobic007G148700 Sobic007G148700 Sobic001G498500--Sobic007G148700 Sobic001G409900 Sobic001G409900 Sobic001G498500--Sobic001G409900 Sobic001G408100 Sobic001G408100 Sobic001G498500--Sobic001G408100 Sobic003G217100 Sobic003G217100 Sobic001G498500--Sobic003G217100 Sobic001G304500 Sobic001G304500 Sobic001G498500--Sobic001G304500 Sobic001G403700 Sobic001G403700 Sobic001G498500--Sobic001G403700 Sobic010G016400 Sobic010G016400 Sobic001G498500--Sobic010G016400 Sobic006G114400 Sobic006G114400 Sobic003G009300--Sobic006G114400 Sobic001G077900 Sobic001G077900 Sobic003G009300--Sobic001G077900 Sobic006G232000 Sobic006G232000 Sobic003G009300--Sobic006G232000 Sobic001G220900 Sobic001G220900 Sobic003G009300--Sobic001G220900 Sobic001G443200 Sobic001G443200 Sobic003G009300--Sobic001G443200 Sobic007G176200 Sobic007G176200 Sobic003G009300--Sobic007G176200 Sobic001G109300 Sobic001G109300 Sobic003G009300--Sobic001G109300 Sobic002G141700 Sobic002G141700 Sobic003G009300--Sobic002G141700 Sobic001G444300 Sobic001G444300 Sobic003G009300--Sobic001G444300 Sobic010G073100 Sobic010G073100 Sobic002G113800--Sobic010G073100 Sobic003G259700 Sobic003G259700 Sobic002G113800--Sobic003G259700 Sobic001G033500 Sobic001G033500 Sobic002G113800--Sobic001G033500 Sobic001G010400 Sobic001G010400 Sobic002G113800--Sobic001G010400 Sobic010G046300 Sobic010G046300 Sobic002G113800--Sobic010G046300 Sobic010G151000 Sobic010G151000 Sobic002G113800--Sobic010G151000 Sobic002G113800--Sobic006G114400 Sobic007G142500 Sobic007G142500 Sobic002G113800--Sobic007G142500 Sobic006G217700 Sobic006G217700 Sobic002G113800--Sobic006G217700 Sobic007G148700--Sobic006G217700 Sobic007G148700--Sobic010G016400 Sobic007G148800 Sobic007G148800 Sobic007G148700--Sobic007G148800 Sobic003G321300 Sobic003G321300 Sobic007G148700--Sobic003G321300 Sobic003G052400 Sobic003G052400 Sobic007G148700--Sobic003G052400 Sobic010G017000 Sobic010G017000 Sobic007G148700--Sobic010G017000 Sobic001G237500 Sobic001G237500 Sobic007G148700--Sobic001G237500 Sobic007G148700--Sobic001G403700 Sobic009G238800 Sobic009G238800 Sobic007G148700--Sobic009G238800 Sobic002G214900 Sobic002G214900 Sobic001G409900--Sobic002G214900 Sobic006G263100 Sobic006G263100 Sobic001G409900--Sobic006G263100 Sobic001G173300 Sobic001G173300 Sobic001G409900--Sobic001G173300 Sobic004G278000 Sobic004G278000 Sobic001G409900--Sobic004G278000 Sobic009G208800 Sobic009G208800 Sobic001G409900--Sobic009G208800 Sobic002G362900 Sobic002G362900 Sobic001G409900--Sobic002G362900 Sobic007G188100 Sobic007G188100 Sobic001G409900--Sobic007G188100 Sobic001G122500 Sobic001G122500 Sobic001G409900--Sobic001G122500 Sobic003G023500 Sobic003G023500 Sobic001G409900--Sobic003G023500 Sobic001G408100--Sobic003G217100 Sobic001G408100--Sobic003G052400 Sobic009G171100 Sobic009G171100 Sobic001G408100--Sobic009G171100 Sobic001G408100--Sobic010G017000 Sobic003G043400 Sobic003G043400 Sobic001G408100--Sobic003G043400 Sobic006G222400 Sobic006G222400 Sobic001G408100--Sobic006G222400 Sobic001G214200 Sobic001G214200 Sobic001G408100--Sobic001G214200 Sobic004G025300 Sobic004G025300 Sobic001G408100--Sobic004G025300 Sobic003G038600 Sobic003G038600 Sobic001G408100--Sobic003G038600 Sobic001G105100 Sobic001G105100 Sobic003G217100--Sobic001G105100 Sobic002G090700 Sobic002G090700 Sobic003G217100--Sobic002G090700 Sobic008G132800 Sobic008G132800 Sobic003G217100--Sobic008G132800 Sobic003G217100--Sobic006G222400 Sobic001G309500 Sobic001G309500 Sobic003G217100--Sobic001G309500 Sobic001G067900 Sobic001G067900 Sobic003G217100--Sobic001G067900 Sobic005G184200 Sobic005G184200 Sobic003G217100--Sobic005G184200 Sobic003G217100--Sobic001G237500 Sobic003G217100--Sobic001G408100 Sobic001G304500--Sobic010G016400 Sobic006G114800 Sobic006G114800 Sobic001G304500--Sobic006G114800 Sobic001G074200 Sobic001G074200 Sobic001G304500--Sobic001G074200 Sobic002G242500 Sobic002G242500 Sobic001G304500--Sobic002G242500 Sobic001G304500--Sobic001G403700 Sobic001G434900 Sobic001G434900 Sobic001G304500--Sobic001G434900 Sobic009G127000 Sobic009G127000 Sobic001G304500--Sobic009G127000 Sobic004G102400 Sobic004G102400 Sobic001G304500--Sobic004G102400 Sobic007G125900 Sobic007G125900 Sobic001G304500--Sobic007G125900 Sobic009G111600 Sobic009G111600 Sobic001G403700--Sobic009G111600 Sobic004G284500 Sobic004G284500 Sobic001G403700--Sobic004G284500 Sobic002G078400 Sobic002G078400 Sobic001G403700--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic001G403700--Sobic006G182100 Sobic002G296300 Sobic002G296300 Sobic001G403700--Sobic002G296300 Sobic003G248600 Sobic003G248600 Sobic001G403700--Sobic003G248600 Sobic001G403700--Sobic008G132800 Sobic001G403700--Sobic002G214900 Sobic010G213400 Sobic010G213400 Sobic001G403700--Sobic010G213400 Sobic005G139400 Sobic005G139400 Sobic010G016400--Sobic005G139400 Sobic009G167700 Sobic009G167700 Sobic010G016400--Sobic009G167700 Sobic004G347300 Sobic004G347300 Sobic010G016400--Sobic004G347300 Sobic006G119200 Sobic006G119200 Sobic010G016400--Sobic006G119200 Sobic010G016400--Sobic007G148800 Sobic010G016400--Sobic006G217700 Sobic010G016400--Sobic001G010400 Sobic010G016400--Sobic004G102400 Sobic009G172500 Sobic009G172500 Sobic010G016400--Sobic009G172500
Octagon: transcription factors


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