Gene annotation
Transcriptome id Sobic.001G501000.1
Synonym DPB, Sb01g046810, ATDPB
Functional annotation transcription factor Dp, putative, expressed
UniProt C5WXV1
Pfam PF02319 PF08781
Panther DB PTHR12548 PTHR12548:SF15
NCBI CDD -
KEGG Orthology K04683; transcription factor Dp-1
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005667transcription regulator complex GO:0003700DNA-binding transcription factor activity GO:0007049cell cycle


Orthologs (automatic annotation)
TAIR AT5G03415 : Transcription factor DP
RAP-DB (Rice) LOC_Os03g05760.1 : transcription factor Dp, putative, expressed
MaizeGDB (Corn) Zm00025a053433 , Zm00025a000696
Brachypodium KQK23607 , KQK23608
Barley HORVU4Hr1G072090.4 , HORVU4Hr1G072090.6 , HORVU4Hr1G072090.2 , HORVU4Hr1G072090.5 , HORVU4Hr1G072090.7 , HORVU4Hr1G072090.1 , HORVU4Hr1G072090.3
Wheat TraesCS4B02G268800 , TraesCS4D02G268100 , TraesCS4D02G268100 , TraesCS4A02G036000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G091200 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
2 Sobic.003G201900 coiled-coil domain-containing protein, putative, expressed -
3 Sobic.003G416400 WD40-like domain containing protein, putative, expressed -
4 Sobic.010G129600 dual specificity protein phosphatase, putative, expressed K04459: DUSP, dual specificity MAP kinase phosphatase
5 Sobic.001G398950 - -
6 Sobic.002G105200 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
7 Sobic.006G115466 - -
8 Sobic.007G028100 WD repeat-containing protein, putative, expressed -
9 Sobic.005G074500 VHS and GAT domain containing protein, expressed -
10 Sobic.002G385900 DCN1, putative, expressed K17822: DCN1-like protein 1/2
11 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
12 Sobic.001G298300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@autophagy-related protein 3, putative, expressed K08343: ubiquitin-like-conjugating enzyme ATG3
13 Sobic.001G161900 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
14 Sobic.003G005200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
15 Sobic.003G436300 expressed protein -
16 Sobic.003G312200 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
17 Sobic.001G117300 expressed protein -
18 Sobic.006G217700 gamma-soluble NSF attachment protein, putative, expressed -
19 Sobic.001G005600 CBS domain containing membrane protein, putative, expressed -
20 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein


Gene co-expression network
sample Sobic001G501000 Sobic001G501000 Sobic004G091200 Sobic004G091200 Sobic001G501000--Sobic004G091200 Sobic003G201900 Sobic003G201900 Sobic001G501000--Sobic003G201900 Sobic003G416400 Sobic003G416400 Sobic001G501000--Sobic003G416400 Sobic010G129600 Sobic010G129600 Sobic001G501000--Sobic010G129600 Sobic001G398950 Sobic001G398950 Sobic001G501000--Sobic001G398950 Sobic002G105200 Sobic002G105200 Sobic001G501000--Sobic002G105200 Sobic006G115466 Sobic006G115466 Sobic001G501000--Sobic006G115466 Sobic007G028100 Sobic007G028100 Sobic001G501000--Sobic007G028100 Sobic005G074500 Sobic005G074500 Sobic001G501000--Sobic005G074500 Sobic009G258400 Sobic009G258400 Sobic004G091200--Sobic009G258400 Sobic001G005600 Sobic001G005600 Sobic004G091200--Sobic001G005600 Sobic003G005200 Sobic003G005200 Sobic004G091200--Sobic003G005200 Sobic004G091200--Sobic010G129600 Sobic001G473600 Sobic001G473600 Sobic004G091200--Sobic001G473600 Sobic001G114500 Sobic001G114500 Sobic004G091200--Sobic001G114500 Sobic004G091200--Sobic002G105200 Sobic004G091200--Sobic003G201900 Sobic003G038600 Sobic003G038600 Sobic004G091200--Sobic003G038600 Sobic006G225300 Sobic006G225300 Sobic003G201900--Sobic006G225300 Sobic002G385900 Sobic002G385900 Sobic003G201900--Sobic002G385900 Sobic002G256300 Sobic002G256300 Sobic003G201900--Sobic002G256300 Sobic003G201900--Sobic003G416400 Sobic003G312200 Sobic003G312200 Sobic003G201900--Sobic003G312200 Sobic007G139700 Sobic007G139700 Sobic003G201900--Sobic007G139700 Sobic001G313500 Sobic001G313500 Sobic003G201900--Sobic001G313500 Sobic009G135600 Sobic009G135600 Sobic003G201900--Sobic009G135600 Sobic003G201900--Sobic001G114500 Sobic001G395400 Sobic001G395400 Sobic003G416400--Sobic001G395400 Sobic003G416400--Sobic002G105200 Sobic002G375300 Sobic002G375300 Sobic003G416400--Sobic002G375300 Sobic001G057800 Sobic001G057800 Sobic003G416400--Sobic001G057800 Sobic003G077900 Sobic003G077900 Sobic003G416400--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic003G416400--Sobic002G400000 Sobic003G416400--Sobic003G201900 Sobic003G416400--Sobic002G385900 Sobic001G323000 Sobic001G323000 Sobic003G416400--Sobic001G323000 Sobic010G129600--Sobic001G005600 Sobic001G161900 Sobic001G161900 Sobic010G129600--Sobic001G161900 Sobic010G129600--Sobic001G313500 Sobic006G271200 Sobic006G271200 Sobic010G129600--Sobic006G271200 Sobic010G129600--Sobic004G091200 Sobic010G261600 Sobic010G261600 Sobic010G129600--Sobic010G261600 Sobic009G160600 Sobic009G160600 Sobic010G129600--Sobic009G160600 Sobic006G237900 Sobic006G237900 Sobic010G129600--Sobic006G237900 Sobic008G061100 Sobic008G061100 Sobic010G129600--Sobic008G061100 Sobic001G311100 Sobic001G311100 Sobic001G398950--Sobic001G311100 Sobic004G339200 Sobic004G339200 Sobic001G398950--Sobic004G339200 Sobic001G085900 Sobic001G085900 Sobic001G398950--Sobic001G085900 Sobic002G296300 Sobic002G296300 Sobic001G398950--Sobic002G296300 Sobic001G398950--Sobic003G416400 Sobic002G261900 Sobic002G261900 Sobic001G398950--Sobic002G261900 Sobic007G059900 Sobic007G059900 Sobic001G398950--Sobic007G059900 Sobic003G061900 Sobic003G061900 Sobic001G398950--Sobic003G061900 Sobic001G398950--Sobic001G057800 Sobic002G382600 Sobic002G382600 Sobic002G105200--Sobic002G382600 Sobic002G105200--Sobic003G416400 Sobic004G237400 Sobic004G237400 Sobic002G105200--Sobic004G237400 Sobic003G053800 Sobic003G053800 Sobic002G105200--Sobic003G053800 Sobic010G020300 Sobic010G020300 Sobic002G105200--Sobic010G020300 Sobic003G352200 Sobic003G352200 Sobic002G105200--Sobic003G352200 Sobic001G296900 Sobic001G296900 Sobic002G105200--Sobic001G296900 Sobic002G105200--Sobic001G473600 Sobic002G105200--Sobic004G091200 Sobic001G298300 Sobic001G298300 Sobic006G115466--Sobic001G298300 Sobic002G314900 Sobic002G314900 Sobic006G115466--Sobic002G314900 Sobic006G115466--Sobic007G028100 Sobic001G279100 Sobic001G279100 Sobic006G115466--Sobic001G279100 Sobic006G115466--Sobic010G129600 Sobic001G436900 Sobic001G436900 Sobic006G115466--Sobic001G436900 Sobic006G115466--Sobic008G061100 Sobic004G349800 Sobic004G349800 Sobic006G115466--Sobic004G349800 Sobic006G004500 Sobic006G004500 Sobic006G115466--Sobic006G004500 Sobic007G028100--Sobic002G314900 Sobic007G028100--Sobic004G237400 Sobic007G000200 Sobic007G000200 Sobic007G028100--Sobic007G000200 Sobic007G028100--Sobic006G115466 Sobic003G089000 Sobic003G089000 Sobic007G028100--Sobic003G089000 Sobic007G028100--Sobic006G004500 Sobic007G028100--Sobic001G436900 Sobic007G028100--Sobic002G382600 Sobic009G069000 Sobic009G069000 Sobic007G028100--Sobic009G069000 Sobic008G103300 Sobic008G103300 Sobic005G074500--Sobic008G103300 Sobic005G074500--Sobic003G312200 Sobic001G206900 Sobic001G206900 Sobic005G074500--Sobic001G206900 Sobic001G449900 Sobic001G449900 Sobic005G074500--Sobic001G449900 Sobic003G337300 Sobic003G337300 Sobic005G074500--Sobic003G337300 Sobic001G426100 Sobic001G426100 Sobic005G074500--Sobic001G426100 Sobic004G323700 Sobic004G323700 Sobic005G074500--Sobic004G323700 Sobic001G431000 Sobic001G431000 Sobic005G074500--Sobic001G431000 Sobic005G074500--Sobic010G020300
Octagon: transcription factors


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