Gene annotation
Transcriptome id Sobic.001G524100.1
Synonym Sb01g048810
Functional annotation expressed protein
UniProt C5X016
Pfam PF10172
Panther DB PTHR31879 PTHR31879:SF2
NCBI CDD KOG4816; Uncharacterized conserved protein
KEGG Orthology K11792; DET1- and DDB1-associated protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41560 : -
RAP-DB (Rice) LOC_Os03g03420.1 : expressed protein
MaizeGDB (Corn) Zm00025a000342 , Zm00025a053492
Brachypodium -
Barley -
Wheat TraesCS4B02G318500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G040600 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
2 Sobic.001G460200 PPR repeat domain containing protein, putative, expressed -
3 Sobic.006G047300 Minichromosome maintenance (MCM2/3/5) family protein("PubMedID : 26759170,PubMedID : 24597475")@EMB1688, putative, expressed K06949: rsgA, ribosome biogenesis GTPase / thiamine phosphate phosphatase
4 Sobic.007G134400 Regulator of chromosome condensation domain containing protein, expressed -
5 Sobic.001G495300 expressed protein -
6 Sobic.006G155700 ABC transporter(PubMedID : 23463491)@white-brown complex homolog protein 11, putative, expressed -
7 Sobic.002G242600 expressed protein -
8 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
9 Sobic.002G244500 ATP phosphoribosyltransferase, putative, expressed K00765: ATP phosphoribosyltransferase
10 Sobic.003G014000 peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase, putative, expressed -
11 Sobic.004G065300 CR084 protein, putative, expressed -
12 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
13 Sobic.009G085200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
14 Sobic.003G069200 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
15 Sobic.005G084000 expressed protein -
16 Sobic.007G210600 ABC transporter, ATP-binding protein, putative, expressed -
17 Sobic.006G153000 expressed protein -
18 Sobic.001G475600 prenyltransferase, putative, expressed K02548: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
19 Sobic.006G248200 - -
20 Sobic.001G384800 expressed protein -


Gene co-expression network
sample Sobic001G524100 Sobic001G524100 Sobic004G040600 Sobic004G040600 Sobic001G524100--Sobic004G040600 Sobic001G460200 Sobic001G460200 Sobic001G524100--Sobic001G460200 Sobic006G047300 Sobic006G047300 Sobic001G524100--Sobic006G047300 Sobic007G134400 Sobic007G134400 Sobic001G524100--Sobic007G134400 Sobic001G495300 Sobic001G495300 Sobic001G524100--Sobic001G495300 Sobic006G155700 Sobic006G155700 Sobic001G524100--Sobic006G155700 Sobic002G242600 Sobic002G242600 Sobic001G524100--Sobic002G242600 Sobic003G265500 Sobic003G265500 Sobic001G524100--Sobic003G265500 Sobic002G244500 Sobic002G244500 Sobic001G524100--Sobic002G244500 Sobic004G040600--Sobic006G047300 Sobic001G099000 Sobic001G099000 Sobic004G040600--Sobic001G099000 Sobic002G081500 Sobic002G081500 Sobic004G040600--Sobic002G081500 Sobic003G439000 Sobic003G439000 Sobic004G040600--Sobic003G439000 Sobic003G386300 Sobic003G386300 Sobic004G040600--Sobic003G386300 Sobic004G040600--Sobic001G495300 Sobic001G489800 Sobic001G489800 Sobic004G040600--Sobic001G489800 Sobic001G168800 Sobic001G168800 Sobic004G040600--Sobic001G168800 Sobic002G109000 Sobic002G109000 Sobic004G040600--Sobic002G109000 Sobic001G460200--Sobic006G047300 Sobic006G263800 Sobic006G263800 Sobic001G460200--Sobic006G263800 Sobic001G281500 Sobic001G281500 Sobic001G460200--Sobic001G281500 Sobic003G114100 Sobic003G114100 Sobic001G460200--Sobic003G114100 Sobic004G015700 Sobic004G015700 Sobic001G460200--Sobic004G015700 Sobic004G255500 Sobic004G255500 Sobic001G460200--Sobic004G255500 Sobic001G460200--Sobic001G099000 Sobic002G140000 Sobic002G140000 Sobic001G460200--Sobic002G140000 Sobic006G204100 Sobic006G204100 Sobic001G460200--Sobic006G204100 Sobic006G047300--Sobic004G040600 Sobic006G091300 Sobic006G091300 Sobic006G047300--Sobic006G091300 Sobic006G047300--Sobic001G460200 Sobic006G047300--Sobic004G015700 Sobic003G225100 Sobic003G225100 Sobic006G047300--Sobic003G225100 Sobic006G111600 Sobic006G111600 Sobic006G047300--Sobic006G111600 Sobic003G267500 Sobic003G267500 Sobic006G047300--Sobic003G267500 Sobic007G015300 Sobic007G015300 Sobic006G047300--Sobic007G015300 Sobic006G047300--Sobic003G265500 Sobic007G134400--Sobic001G460200 Sobic006G013800 Sobic006G013800 Sobic007G134400--Sobic006G013800 Sobic007G134400--Sobic002G244500 Sobic009G190000 Sobic009G190000 Sobic007G134400--Sobic009G190000 Sobic001G221300 Sobic001G221300 Sobic007G134400--Sobic001G221300 Sobic007G134400--Sobic003G265500 Sobic006G003901 Sobic006G003901 Sobic007G134400--Sobic006G003901 Sobic007G134400--Sobic006G155700 Sobic002G353300 Sobic002G353300 Sobic007G134400--Sobic002G353300 Sobic007G210600 Sobic007G210600 Sobic001G495300--Sobic007G210600 Sobic003G074700 Sobic003G074700 Sobic001G495300--Sobic003G074700 Sobic005G084000 Sobic005G084000 Sobic001G495300--Sobic005G084000 Sobic003G137100 Sobic003G137100 Sobic001G495300--Sobic003G137100 Sobic001G041800 Sobic001G041800 Sobic001G495300--Sobic001G041800 Sobic001G495300--Sobic002G109000 Sobic001G495300--Sobic001G099000 Sobic008G131700 Sobic008G131700 Sobic001G495300--Sobic008G131700 Sobic007G201400 Sobic007G201400 Sobic001G495300--Sobic007G201400 Sobic003G069200 Sobic003G069200 Sobic006G155700--Sobic003G069200 Sobic006G155700--Sobic001G221300 Sobic009G083300 Sobic009G083300 Sobic006G155700--Sobic009G083300 Sobic002G198600 Sobic002G198600 Sobic006G155700--Sobic002G198600 Sobic003G162900 Sobic003G162900 Sobic006G155700--Sobic003G162900 Sobic003G150600 Sobic003G150600 Sobic006G155700--Sobic003G150600 Sobic006G155700--Sobic004G040600 Sobic006G054300 Sobic006G054300 Sobic006G155700--Sobic006G054300 Sobic003G433900 Sobic003G433900 Sobic006G155700--Sobic003G433900 Sobic004G044000 Sobic004G044000 Sobic002G242600--Sobic004G044000 Sobic007G013400 Sobic007G013400 Sobic002G242600--Sobic007G013400 Sobic003G030900 Sobic003G030900 Sobic002G242600--Sobic003G030900 Sobic003G383500 Sobic003G383500 Sobic002G242600--Sobic003G383500 Sobic009G001500 Sobic009G001500 Sobic002G242600--Sobic009G001500 Sobic002G190100 Sobic002G190100 Sobic002G242600--Sobic002G190100 Sobic001G027600 Sobic001G027600 Sobic002G242600--Sobic001G027600 Sobic001G475600 Sobic001G475600 Sobic002G242600--Sobic001G475600 Sobic006G248200 Sobic006G248200 Sobic002G242600--Sobic006G248200 Sobic003G265500--Sobic003G225100 Sobic005G184300 Sobic005G184300 Sobic003G265500--Sobic005G184300 Sobic003G085000 Sobic003G085000 Sobic003G265500--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic003G265500--Sobic001G424300 Sobic010G221600 Sobic010G221600 Sobic003G265500--Sobic010G221600 Sobic004G307400 Sobic004G307400 Sobic003G265500--Sobic004G307400 Sobic004G065300 Sobic004G065300 Sobic003G265500--Sobic004G065300 Sobic003G265500--Sobic002G353300 Sobic001G104800 Sobic001G104800 Sobic003G265500--Sobic001G104800 Sobic009G124000 Sobic009G124000 Sobic002G244500--Sobic009G124000 Sobic006G275800 Sobic006G275800 Sobic002G244500--Sobic006G275800 Sobic008G067100 Sobic008G067100 Sobic002G244500--Sobic008G067100 Sobic002G244500--Sobic010G221600 Sobic002G244500--Sobic003G265500 Sobic004G275600 Sobic004G275600 Sobic002G244500--Sobic004G275600 Sobic004G144400 Sobic004G144400 Sobic002G244500--Sobic004G144400 Sobic003G420900 Sobic003G420900 Sobic002G244500--Sobic003G420900 Sobic002G333100 Sobic002G333100 Sobic002G244500--Sobic002G333100
Octagon: transcription factors


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