Gene annotation
Transcriptome id Sobic.001G529900.2
Synonym Sb01g049300
Functional annotation expressed protein
UniProt A0A1Z5SBR2
Pfam PF13640
Panther DB PTHR10869 PTHR10869:SF80
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G51880 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os03g02730.1 : expressed protein
MaizeGDB (Corn) Zm00025a000256
Brachypodium KQK23958
Barley HORVU4Hr1G085730.6 , HORVU4Hr1G085730.5 , HORVU4Hr1G085730.4 , HORVU4Hr1G085730.3 , HORVU4Hr1G085730.2 , HORVU4Hr1G085730.1
Wheat TraesCS5A02G522300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G180600 expressed protein -
2 Sobic.004G167100 rar1, putative, expressed K13458: disease resistance protein
3 Sobic.007G200100 KID-containing protein, putative, expressed -
4 Sobic.005G121100 ZOS11-03 - C2H2 zinc finger protein, expressed -
5 Sobic.010G278000 expressed protein -
6 Sobic.003G022800 ribosomal protein L23 family protein, putative, expressed K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
7 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
8 Sobic.001G047100 OTU-like cysteine protease family protein, putative, expressed K18342: OTU domain-containing protein 6
9 Sobic.005G104800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.007G168500 multiple myeloma tumor-associated protein 2, putative, expressed -
11 Sobic.008G011600 ubiquitin-like protein 5, putative, expressed K13113: UBL5, ubiquitin-like protein 5
12 Sobic.010G199100 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.002G384200 expressed protein -
14 Sobic.003G001200 expressed protein -
15 Sobic.009G036800 expressed protein -
16 Sobic.009G218800 Divergent PAP2 family domain containing protein, expressed K09775: uncharacterized protein
17 Sobic.010G015200 expressed protein -
18 Sobic.010G158200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G337100 expressed protein -
20 Sobic.002G138500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 27329702)@expressed protein -


Gene co-expression network
sample Sobic001G529900 Sobic001G529900 Sobic006G180600 Sobic006G180600 Sobic001G529900--Sobic006G180600 Sobic004G167100 Sobic004G167100 Sobic001G529900--Sobic004G167100 Sobic007G200100 Sobic007G200100 Sobic001G529900--Sobic007G200100 Sobic005G121100 Sobic005G121100 Sobic001G529900--Sobic005G121100 Sobic010G278000 Sobic010G278000 Sobic001G529900--Sobic010G278000 Sobic003G022800 Sobic003G022800 Sobic001G529900--Sobic003G022800 Sobic004G342900 Sobic004G342900 Sobic001G529900--Sobic004G342900 Sobic001G047100 Sobic001G047100 Sobic001G529900--Sobic001G047100 Sobic005G104800 Sobic005G104800 Sobic001G529900--Sobic005G104800 Sobic002G246200 Sobic002G246200 Sobic006G180600--Sobic002G246200 Sobic001G100400 Sobic001G100400 Sobic006G180600--Sobic001G100400 Sobic010G015200 Sobic010G015200 Sobic006G180600--Sobic010G015200 Sobic007G211500 Sobic007G211500 Sobic006G180600--Sobic007G211500 Sobic002G384200 Sobic002G384200 Sobic006G180600--Sobic002G384200 Sobic010G199100 Sobic010G199100 Sobic006G180600--Sobic010G199100 Sobic001G533300 Sobic001G533300 Sobic006G180600--Sobic001G533300 Sobic007G091000 Sobic007G091000 Sobic006G180600--Sobic007G091000 Sobic001G441000 Sobic001G441000 Sobic006G180600--Sobic001G441000 Sobic007G071300 Sobic007G071300 Sobic004G167100--Sobic007G071300 Sobic010G216200 Sobic010G216200 Sobic004G167100--Sobic010G216200 Sobic004G085200 Sobic004G085200 Sobic004G167100--Sobic004G085200 Sobic001G044000 Sobic001G044000 Sobic004G167100--Sobic001G044000 Sobic010G195701 Sobic010G195701 Sobic004G167100--Sobic010G195701 Sobic004G175700 Sobic004G175700 Sobic004G167100--Sobic004G175700 Sobic004G225500 Sobic004G225500 Sobic004G167100--Sobic004G225500 Sobic010G103900 Sobic010G103900 Sobic004G167100--Sobic010G103900 Sobic001G428100 Sobic001G428100 Sobic004G167100--Sobic001G428100 Sobic002G273100 Sobic002G273100 Sobic007G200100--Sobic002G273100 Sobic006G100200 Sobic006G100200 Sobic007G200100--Sobic006G100200 Sobic001G041000 Sobic001G041000 Sobic007G200100--Sobic001G041000 Sobic005G107300 Sobic005G107300 Sobic007G200100--Sobic005G107300 Sobic004G166400 Sobic004G166400 Sobic007G200100--Sobic004G166400 Sobic006G241900 Sobic006G241900 Sobic007G200100--Sobic006G241900 Sobic005G155600 Sobic005G155600 Sobic007G200100--Sobic005G155600 Sobic004G035200 Sobic004G035200 Sobic007G200100--Sobic004G035200 Sobic009G100800 Sobic009G100800 Sobic007G200100--Sobic009G100800 Sobic005G121100--Sobic002G384200 Sobic005G121100--Sobic003G022800 Sobic007G213600 Sobic007G213600 Sobic005G121100--Sobic007G213600 Sobic006G075801 Sobic006G075801 Sobic005G121100--Sobic006G075801 Sobic005G121100--Sobic006G180600 Sobic005G121100--Sobic004G342900 Sobic001G324900 Sobic001G324900 Sobic005G121100--Sobic001G324900 Sobic002G005700 Sobic002G005700 Sobic005G121100--Sobic002G005700 Sobic001G405900 Sobic001G405900 Sobic005G121100--Sobic001G405900 Sobic005G028700 Sobic005G028700 Sobic010G278000--Sobic005G028700 Sobic001G459200 Sobic001G459200 Sobic010G278000--Sobic001G459200 Sobic004G268200 Sobic004G268200 Sobic010G278000--Sobic004G268200 Sobic009G203100 Sobic009G203100 Sobic010G278000--Sobic009G203100 Sobic006G099700 Sobic006G099700 Sobic010G278000--Sobic006G099700 Sobic002G046100 Sobic002G046100 Sobic010G278000--Sobic002G046100 Sobic009G023200 Sobic009G023200 Sobic010G278000--Sobic009G023200 Sobic003G181500 Sobic003G181500 Sobic010G278000--Sobic003G181500 Sobic003G130800 Sobic003G130800 Sobic010G278000--Sobic003G130800 Sobic007G169000 Sobic007G169000 Sobic003G022800--Sobic007G169000 Sobic010G045200 Sobic010G045200 Sobic003G022800--Sobic010G045200 Sobic004G356600 Sobic004G356600 Sobic003G022800--Sobic004G356600 Sobic007G085350 Sobic007G085350 Sobic003G022800--Sobic007G085350 Sobic008G086401 Sobic008G086401 Sobic003G022800--Sobic008G086401 Sobic009G167300 Sobic009G167300 Sobic003G022800--Sobic009G167300 Sobic003G201300 Sobic003G201300 Sobic003G022800--Sobic003G201300 Sobic009G116766 Sobic009G116766 Sobic003G022800--Sobic009G116766 Sobic005G087600 Sobic005G087600 Sobic003G022800--Sobic005G087600 Sobic003G337100 Sobic003G337100 Sobic004G342900--Sobic003G337100 Sobic002G326000 Sobic002G326000 Sobic004G342900--Sobic002G326000 Sobic010G158200 Sobic010G158200 Sobic004G342900--Sobic010G158200 Sobic002G253000 Sobic002G253000 Sobic004G342900--Sobic002G253000 Sobic004G342900--Sobic006G075801 Sobic005G016600 Sobic005G016600 Sobic004G342900--Sobic005G016600 Sobic004G300701 Sobic004G300701 Sobic004G342900--Sobic004G300701 Sobic003G283500 Sobic003G283500 Sobic004G342900--Sobic003G283500 Sobic004G342900--Sobic009G167300 Sobic002G258800 Sobic002G258800 Sobic001G047100--Sobic002G258800 Sobic002G261800 Sobic002G261800 Sobic001G047100--Sobic002G261800 Sobic001G467300 Sobic001G467300 Sobic001G047100--Sobic001G467300 Sobic001G216200 Sobic001G216200 Sobic001G047100--Sobic001G216200 Sobic009G065400 Sobic009G065400 Sobic001G047100--Sobic009G065400 Sobic002G282400 Sobic002G282400 Sobic001G047100--Sobic002G282400 Sobic001G089500 Sobic001G089500 Sobic001G047100--Sobic001G089500 Sobic007G019100 Sobic007G019100 Sobic001G047100--Sobic007G019100 Sobic003G332401 Sobic003G332401 Sobic001G047100--Sobic003G332401 Sobic003G243600 Sobic003G243600 Sobic005G104800--Sobic003G243600 Sobic001G106700 Sobic001G106700 Sobic005G104800--Sobic001G106700 Sobic006G254100 Sobic006G254100 Sobic005G104800--Sobic006G254100 Sobic004G219300 Sobic004G219300 Sobic005G104800--Sobic004G219300 Sobic003G117900 Sobic003G117900 Sobic005G104800--Sobic003G117900 Sobic004G209900 Sobic004G209900 Sobic005G104800--Sobic004G209900 Sobic005G104800--Sobic003G130800 Sobic002G134001 Sobic002G134001 Sobic005G104800--Sobic002G134001 Sobic009G185800 Sobic009G185800 Sobic005G104800--Sobic009G185800
Octagon: transcription factors


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