Gene annotation
Transcriptome id Sobic.001G537400.1
Synonym Sb01g050010, TRFL3
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1Z5SC80
Pfam -
Panther DB PTHR21717
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58340 : myb-like HTH transcriptional regulator family protein
RAP-DB (Rice) LOC_Os06g08290.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a041691 , Zm00025a015410 , Zm00025a049800
Brachypodium KQK19305
Barley -
Wheat TraesCS7B02G047400 , TraesCS7A02G145200 , TraesCS7D02G146500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G362200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MSH-like DNA mismatch repair protein, putative, expressed K08735: DNA mismatch repair protein MSH2
2 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
3 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
4 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
5 Sobic.002G426100 aldehyde dehydrogenase, putative, expressed -
6 Sobic.008G031200 pentatricopeptide, putative, expressed -
7 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
8 Sobic.007G006800 pentatricopeptide, putative, expressed -
9 Sobic.001G211500 LIG1 - Putative DNA ligase I, expressed K10747: DNA ligase 1
10 Sobic.006G071628 - -
11 Sobic.003G135500 sugar transporter superfamily, putative, expressed -
12 Sobic.008G179000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
13 Sobic.002G043000 HEN1, putative, expressed -
14 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
15 Sobic.008G111600 heat shock protein, putative, expressed K09487: HSP90B, heat shock protein 90kDa beta
16 Sobic.010G250400 OsSub52 - Putative Subtilisin homologue, expressed -
17 Sobic.004G129500 expressed protein -
18 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
19 Sobic.010G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cullin family domain containing protein, putative, expressed K03349: anaphase-promoting complex subunit 2
20 Sobic.001G408300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G537400 Sobic001G537400 Sobic002G362200 Sobic002G362200 Sobic001G537400--Sobic002G362200 Sobic001G199500 Sobic001G199500 Sobic001G537400--Sobic001G199500 Sobic009G177200 Sobic009G177200 Sobic001G537400--Sobic009G177200 Sobic009G188900 Sobic009G188900 Sobic001G537400--Sobic009G188900 Sobic002G426100 Sobic002G426100 Sobic001G537400--Sobic002G426100 Sobic008G031200 Sobic008G031200 Sobic001G537400--Sobic008G031200 Sobic009G052100 Sobic009G052100 Sobic001G537400--Sobic009G052100 Sobic007G006800 Sobic007G006800 Sobic001G537400--Sobic007G006800 Sobic001G211500 Sobic001G211500 Sobic001G537400--Sobic001G211500 Sobic008G111600 Sobic008G111600 Sobic002G362200--Sobic008G111600 Sobic010G252700 Sobic010G252700 Sobic002G362200--Sobic010G252700 Sobic008G090000 Sobic008G090000 Sobic002G362200--Sobic008G090000 Sobic008G179000 Sobic008G179000 Sobic002G362200--Sobic008G179000 Sobic002G362200--Sobic002G426100 Sobic002G362200--Sobic001G537400 Sobic001G268300 Sobic001G268300 Sobic002G362200--Sobic001G268300 Sobic002G362200--Sobic008G031200 Sobic003G147500 Sobic003G147500 Sobic002G362200--Sobic003G147500 Sobic005G088900 Sobic005G088900 Sobic001G199500--Sobic005G088900 Sobic003G102700 Sobic003G102700 Sobic001G199500--Sobic003G102700 Sobic006G084300 Sobic006G084300 Sobic001G199500--Sobic006G084300 Sobic003G024000 Sobic003G024000 Sobic001G199500--Sobic003G024000 Sobic006G281900 Sobic006G281900 Sobic001G199500--Sobic006G281900 Sobic001G199500--Sobic009G188900 Sobic001G199500--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000 Sobic009G177200--Sobic001G537400 Sobic009G002900 Sobic009G002900 Sobic009G177200--Sobic009G002900 Sobic009G177200--Sobic001G199500 Sobic001G395200 Sobic001G395200 Sobic009G177200--Sobic001G395200 Sobic008G113300 Sobic008G113300 Sobic009G177200--Sobic008G113300 Sobic008G045000 Sobic008G045000 Sobic009G177200--Sobic008G045000 Sobic003G223000 Sobic003G223000 Sobic009G177200--Sobic003G223000 Sobic006G140400 Sobic006G140400 Sobic009G177200--Sobic006G140400 Sobic001G425700 Sobic001G425700 Sobic009G177200--Sobic001G425700 Sobic002G168000 Sobic002G168000 Sobic009G188900--Sobic002G168000 Sobic010G250400 Sobic010G250400 Sobic009G188900--Sobic010G250400 Sobic009G188900--Sobic006G281900 Sobic009G188900--Sobic001G199500 Sobic006G275500 Sobic006G275500 Sobic009G188900--Sobic006G275500 Sobic009G188900--Sobic001G425700 Sobic001G290500 Sobic001G290500 Sobic009G188900--Sobic001G290500 Sobic005G153000 Sobic005G153000 Sobic009G188900--Sobic005G153000 Sobic007G187700 Sobic007G187700 Sobic009G188900--Sobic007G187700 Sobic009G120400 Sobic009G120400 Sobic002G426100--Sobic009G120400 Sobic002G426100--Sobic008G111600 Sobic006G181800 Sobic006G181800 Sobic002G426100--Sobic006G181800 Sobic002G078100 Sobic002G078100 Sobic002G426100--Sobic002G078100 Sobic002G043000 Sobic002G043000 Sobic002G426100--Sobic002G043000 Sobic006G017800 Sobic006G017800 Sobic002G426100--Sobic006G017800 Sobic002G066800 Sobic002G066800 Sobic002G426100--Sobic002G066800 Sobic007G186400 Sobic007G186400 Sobic002G426100--Sobic007G186400 Sobic004G129500 Sobic004G129500 Sobic002G426100--Sobic004G129500 Sobic008G031200--Sobic008G179000 Sobic008G031200--Sobic001G268300 Sobic008G031200--Sobic010G252700 Sobic008G031200--Sobic002G362200 Sobic003G397100 Sobic003G397100 Sobic008G031200--Sobic003G397100 Sobic003G153900 Sobic003G153900 Sobic008G031200--Sobic003G153900 Sobic002G084400 Sobic002G084400 Sobic008G031200--Sobic002G084400 Sobic008G031200--Sobic001G537400 Sobic002G123600 Sobic002G123600 Sobic008G031200--Sobic002G123600 Sobic004G315700 Sobic004G315700 Sobic009G052100--Sobic004G315700 Sobic004G156200 Sobic004G156200 Sobic009G052100--Sobic004G156200 Sobic001G507200 Sobic001G507200 Sobic009G052100--Sobic001G507200 Sobic009G049200 Sobic009G049200 Sobic009G052100--Sobic009G049200 Sobic009G052100--Sobic006G071628 Sobic010G250800 Sobic010G250800 Sobic009G052100--Sobic010G250800 Sobic003G315700 Sobic003G315700 Sobic009G052100--Sobic003G315700 Sobic009G052100--Sobic010G252700 Sobic003G420300 Sobic003G420300 Sobic009G052100--Sobic003G420300 Sobic007G006800--Sobic010G250800 Sobic007G006800--Sobic001G199500 Sobic001G408300 Sobic001G408300 Sobic007G006800--Sobic001G408300 Sobic007G006800--Sobic005G088900 Sobic007G006800--Sobic008G113300 Sobic002G021200 Sobic002G021200 Sobic007G006800--Sobic002G021200 Sobic007G006800--Sobic006G281900 Sobic003G369200 Sobic003G369200 Sobic007G006800--Sobic003G369200 Sobic002G215200 Sobic002G215200 Sobic007G006800--Sobic002G215200 Sobic006G106200 Sobic006G106200 Sobic001G211500--Sobic006G106200 Sobic007G209600 Sobic007G209600 Sobic001G211500--Sobic007G209600 Sobic007G031300 Sobic007G031300 Sobic001G211500--Sobic007G031300 Sobic001G211500--Sobic009G052100 Sobic003G411700 Sobic003G411700 Sobic001G211500--Sobic003G411700 Sobic008G169400 Sobic008G169400 Sobic001G211500--Sobic008G169400 Sobic007G076200 Sobic007G076200 Sobic001G211500--Sobic007G076200 Sobic002G271400 Sobic002G271400 Sobic001G211500--Sobic002G271400 Sobic010G024000 Sobic010G024000 Sobic001G211500--Sobic010G024000
Octagon: transcription factors


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