Gene annotation
Transcriptome id Sobic.002G002700.1
Synonym GLUR3, Sb02g000430, ATGLR3.4, GLR3.4
Functional annotation glutamate receptor, putative, expressed
UniProt C5X740
Pfam PF00497 PF13458 PF00060
Panther DB PTHR18966 PTHR18966:SF235
NCBI CDD KOG1052; Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits
KEGG Orthology K05387; glutamate receptor, ionotropic, plant
Gene Ontology GO:0016020; membrane GO:0004970ionotropic glutamate receptor activity


Orthologs (automatic annotation)
TAIR AT1G05200 : glutamate receptor 3.4
RAP-DB (Rice) LOC_Os07g01310.1 : glutamate receptor, putative, expressed
MaizeGDB (Corn) Zm00025a044837 , Zm00025a044838
Brachypodium KQK21239
Barley -
Wheat TraesCS2D02G265700 , TraesCS2D02G265700 , TraesCS2A02G257200 , TraesCS2B02G285400 , TraesCS2B02G285400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G112500 zinc finger family protein, putative, expressed -
2 Sobic.003G008900 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
3 Sobic.009G214800 - -
4 Sobic.004G327800 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
5 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
6 Sobic.003G122100 FAD binding domain containing protein, expressed K10960: chlP, geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase
7 Sobic.002G333100 transmembrane protein, putative, expressed -
8 Sobic.001G006400 DANA2, putative, expressed -
9 Sobic.003G128550 - -
10 Sobic.010G208400 OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
11 Sobic.002G301600 amidase, putative, expressed K01426: E3.5.1.4, amidase
12 Sobic.007G046500 60S ribosomal protein L18a-1, putative, expressed -
13 Sobic.008G193300 sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@"OsSUT2(Ortholog in rice:Eom et al., 2011)"(PubMedID : 31659914)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
14 Sobic.010G154500 - -
15 Sobic.002G081300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.001G466900 expressed protein -
17 Sobic.008G060150 - -
18 Sobic.006G249400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
19 Sobic.003G052600 - -
20 Sobic.004G301200 kinesin motor domain containing protein, expressed K11498: centromeric protein E


Gene co-expression network
sample Sobic002G002700 Sobic002G002700 Sobic008G112500 Sobic008G112500 Sobic002G002700--Sobic008G112500 Sobic003G008900 Sobic003G008900 Sobic002G002700--Sobic003G008900 Sobic009G214800 Sobic009G214800 Sobic002G002700--Sobic009G214800 Sobic004G327800 Sobic004G327800 Sobic002G002700--Sobic004G327800 Sobic010G080300 Sobic010G080300 Sobic002G002700--Sobic010G080300 Sobic003G122100 Sobic003G122100 Sobic002G002700--Sobic003G122100 Sobic002G333100 Sobic002G333100 Sobic002G002700--Sobic002G333100 Sobic001G006400 Sobic001G006400 Sobic002G002700--Sobic001G006400 Sobic003G128550 Sobic003G128550 Sobic002G002700--Sobic003G128550 Sobic008G112500--Sobic002G002700 Sobic006G176100 Sobic006G176100 Sobic008G112500--Sobic006G176100 Sobic008G112500--Sobic009G214800 Sobic007G046400 Sobic007G046400 Sobic008G112500--Sobic007G046400 Sobic003G032800 Sobic003G032800 Sobic008G112500--Sobic003G032800 Sobic010G115900 Sobic010G115900 Sobic008G112500--Sobic010G115900 Sobic007G222800 Sobic007G222800 Sobic008G112500--Sobic007G222800 Sobic001G280400 Sobic001G280400 Sobic008G112500--Sobic001G280400 Sobic010G185600 Sobic010G185600 Sobic008G112500--Sobic010G185600 Sobic001G295300 Sobic001G295300 Sobic003G008900--Sobic001G295300 Sobic001G308800 Sobic001G308800 Sobic003G008900--Sobic001G308800 Sobic001G023700 Sobic001G023700 Sobic003G008900--Sobic001G023700 Sobic003G022300 Sobic003G022300 Sobic003G008900--Sobic003G022300 Sobic002G065200 Sobic002G065200 Sobic003G008900--Sobic002G065200 Sobic004G227200 Sobic004G227200 Sobic003G008900--Sobic004G227200 Sobic001G221300 Sobic001G221300 Sobic003G008900--Sobic001G221300 Sobic007G178500 Sobic007G178500 Sobic003G008900--Sobic007G178500 Sobic003G008900--Sobic001G006400 Sobic005G115400 Sobic005G115400 Sobic009G214800--Sobic005G115400 Sobic009G214800--Sobic010G115900 Sobic010G143000 Sobic010G143000 Sobic009G214800--Sobic010G143000 Sobic002G321100 Sobic002G321100 Sobic009G214800--Sobic002G321100 Sobic008G120132 Sobic008G120132 Sobic009G214800--Sobic008G120132 Sobic004G197800 Sobic004G197800 Sobic009G214800--Sobic004G197800 Sobic001G467700 Sobic001G467700 Sobic009G214800--Sobic001G467700 Sobic010G168000 Sobic010G168000 Sobic009G214800--Sobic010G168000 Sobic009G070300 Sobic009G070300 Sobic009G214800--Sobic009G070300 Sobic001G037900 Sobic001G037900 Sobic004G327800--Sobic001G037900 Sobic001G466900 Sobic001G466900 Sobic004G327800--Sobic001G466900 Sobic007G171950 Sobic007G171950 Sobic004G327800--Sobic007G171950 Sobic004G327800--Sobic003G008900 Sobic004G327800--Sobic001G295300 Sobic003G265500 Sobic003G265500 Sobic004G327800--Sobic003G265500 Sobic004G327800--Sobic001G006400 Sobic002G353300 Sobic002G353300 Sobic004G327800--Sobic002G353300 Sobic002G281800 Sobic002G281800 Sobic004G327800--Sobic002G281800 Sobic010G080300--Sobic002G281800 Sobic008G193300 Sobic008G193300 Sobic010G080300--Sobic008G193300 Sobic003G125400 Sobic003G125400 Sobic010G080300--Sobic003G125400 Sobic007G046500 Sobic007G046500 Sobic010G080300--Sobic007G046500 Sobic008G063200 Sobic008G063200 Sobic010G080300--Sobic008G063200 Sobic008G144800 Sobic008G144800 Sobic010G080300--Sobic008G144800 Sobic005G072200 Sobic005G072200 Sobic010G080300--Sobic005G072200 Sobic007G029100 Sobic007G029100 Sobic010G080300--Sobic007G029100 Sobic003G310100 Sobic003G310100 Sobic010G080300--Sobic003G310100 Sobic002G428900 Sobic002G428900 Sobic003G122100--Sobic002G428900 Sobic003G122100--Sobic009G214800 Sobic005G080050 Sobic005G080050 Sobic003G122100--Sobic005G080050 Sobic003G016400 Sobic003G016400 Sobic003G122100--Sobic003G016400 Sobic003G122100--Sobic010G168000 Sobic005G071800 Sobic005G071800 Sobic003G122100--Sobic005G071800 Sobic003G248300 Sobic003G248300 Sobic003G122100--Sobic003G248300 Sobic002G287750 Sobic002G287750 Sobic003G122100--Sobic002G287750 Sobic004G184800 Sobic004G184800 Sobic003G122100--Sobic004G184800 Sobic003G420900 Sobic003G420900 Sobic002G333100--Sobic003G420900 Sobic010G108900 Sobic010G108900 Sobic002G333100--Sobic010G108900 Sobic006G168400 Sobic006G168400 Sobic002G333100--Sobic006G168400 Sobic002G244500 Sobic002G244500 Sobic002G333100--Sobic002G244500 Sobic001G376700 Sobic001G376700 Sobic002G333100--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic002G333100--Sobic004G296800 Sobic002G333100--Sobic003G265500 Sobic009G124000 Sobic009G124000 Sobic002G333100--Sobic009G124000 Sobic001G463500 Sobic001G463500 Sobic002G333100--Sobic001G463500 Sobic001G006400--Sobic001G295300 Sobic001G006400--Sobic001G308800 Sobic001G006400--Sobic008G063200 Sobic002G102200 Sobic002G102200 Sobic001G006400--Sobic002G102200 Sobic003G291400 Sobic003G291400 Sobic001G006400--Sobic003G291400 Sobic001G006400--Sobic003G008900 Sobic001G447700 Sobic001G447700 Sobic001G006400--Sobic001G447700 Sobic003G439100 Sobic003G439100 Sobic001G006400--Sobic003G439100 Sobic008G186400 Sobic008G186400 Sobic001G006400--Sobic008G186400 Sobic009G107020 Sobic009G107020 Sobic003G128550--Sobic009G107020 Sobic009G074250 Sobic009G074250 Sobic003G128550--Sobic009G074250 Sobic003G128550--Sobic005G115400 Sobic001G267000 Sobic001G267000 Sobic003G128550--Sobic001G267000 Sobic003G128550--Sobic010G115900 Sobic003G128550--Sobic009G214800 Sobic010G214400 Sobic010G214400 Sobic003G128550--Sobic010G214400 Sobic002G413900 Sobic002G413900 Sobic003G128550--Sobic002G413900 Sobic003G128550--Sobic009G070300
Octagon: transcription factors


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