Gene annotation
Transcriptome id Sobic.002G014600.1
Synonym Sb02g001470
Functional annotation OsFBX285 - F-box domain containing protein, expressed
UniProt C5X7Z2
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02910.1 : OsFBL33 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) Zm00025a036973
Brachypodium KQJ87316 , PNT75200 , PNT75201
Barley -
Wheat TraesCS7D02G483700 , TraesCS6A02G047800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G186000 salt tolerant protein, putative, expressed -
2 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
3 Sobic.008G127400 OsFBX252 - F-box domain containing protein, expressed -
4 Sobic.006G272200 cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
5 Sobic.002G394800 SWIB/MDM2 domain containing protein, expressed K11650: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
6 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
7 Sobic.010G232900 surp module family protein, putative, expressed -
8 Sobic.010G037400 RNA recognition motif containing protein, putative, expressed -
9 Sobic.006G067900 expressed protein -
10 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
11 Sobic.002G014700 OsFBX209 - F-box domain containing protein, expressed -
12 Sobic.003G427100 WD domain, G-beta repeat domain containing protein, expressed K15542: polyadenylation factor subunit 2
13 Sobic.007G039400 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
14 Sobic.001G085000 expressed protein -
15 Sobic.006G134800 autophagy-related protein 10, putative, expressed K17888: ATG10L, ubiquitin-like-conjugating enzyme ATG10
16 Sobic.002G179100 AGAP009532-PA, putative, expressed -
17 Sobic.010G247400 Brix domain containing protein, putative, expressed K14561: U3 small nucleolar ribonucleoprotein protein IMP4
18 Sobic.009G036200 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed K11648: SMARCB1, SNF5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
19 Sobic.009G133400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.002G227200 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4


Gene co-expression network
sample Sobic002G014600 Sobic002G014600 Sobic004G186000 Sobic004G186000 Sobic002G014600--Sobic004G186000 Sobic002G280600 Sobic002G280600 Sobic002G014600--Sobic002G280600 Sobic008G127400 Sobic008G127400 Sobic002G014600--Sobic008G127400 Sobic006G272200 Sobic006G272200 Sobic002G014600--Sobic006G272200 Sobic002G394800 Sobic002G394800 Sobic002G014600--Sobic002G394800 Sobic003G439800 Sobic003G439800 Sobic002G014600--Sobic003G439800 Sobic010G232900 Sobic010G232900 Sobic002G014600--Sobic010G232900 Sobic010G037400 Sobic010G037400 Sobic002G014600--Sobic010G037400 Sobic006G067900 Sobic006G067900 Sobic002G014600--Sobic006G067900 Sobic002G204000 Sobic002G204000 Sobic004G186000--Sobic002G204000 Sobic001G038100 Sobic001G038100 Sobic004G186000--Sobic001G038100 Sobic008G128600 Sobic008G128600 Sobic004G186000--Sobic008G128600 Sobic010G028300 Sobic010G028300 Sobic004G186000--Sobic010G028300 Sobic001G473600 Sobic001G473600 Sobic004G186000--Sobic001G473600 Sobic006G252300 Sobic006G252300 Sobic004G186000--Sobic006G252300 Sobic007G191700 Sobic007G191700 Sobic004G186000--Sobic007G191700 Sobic001G507400 Sobic001G507400 Sobic004G186000--Sobic001G507400 Sobic001G131800 Sobic001G131800 Sobic004G186000--Sobic001G131800 Sobic002G143900 Sobic002G143900 Sobic002G280600--Sobic002G143900 Sobic002G280600--Sobic002G394800 Sobic002G280600--Sobic010G232900 Sobic007G027700 Sobic007G027700 Sobic002G280600--Sobic007G027700 Sobic003G123000 Sobic003G123000 Sobic002G280600--Sobic003G123000 Sobic006G233300 Sobic006G233300 Sobic002G280600--Sobic006G233300 Sobic010G239800 Sobic010G239800 Sobic002G280600--Sobic010G239800 Sobic003G273400 Sobic003G273400 Sobic002G280600--Sobic003G273400 Sobic001G526300 Sobic001G526300 Sobic002G280600--Sobic001G526300 Sobic008G127400--Sobic007G027700 Sobic006G267300 Sobic006G267300 Sobic008G127400--Sobic006G267300 Sobic003G205501 Sobic003G205501 Sobic008G127400--Sobic003G205501 Sobic006G065800 Sobic006G065800 Sobic008G127400--Sobic006G065800 Sobic004G246700 Sobic004G246700 Sobic008G127400--Sobic004G246700 Sobic008G058800 Sobic008G058800 Sobic008G127400--Sobic008G058800 Sobic002G423200 Sobic002G423200 Sobic008G127400--Sobic002G423200 Sobic006G248500 Sobic006G248500 Sobic008G127400--Sobic006G248500 Sobic010G033400 Sobic010G033400 Sobic008G127400--Sobic010G033400 Sobic010G085200 Sobic010G085200 Sobic006G272200--Sobic010G085200 Sobic003G119400 Sobic003G119400 Sobic006G272200--Sobic003G119400 Sobic001G362300 Sobic001G362300 Sobic006G272200--Sobic001G362300 Sobic006G272200--Sobic002G394800 Sobic009G007700 Sobic009G007700 Sobic006G272200--Sobic009G007700 Sobic004G074300 Sobic004G074300 Sobic006G272200--Sobic004G074300 Sobic001G370300 Sobic001G370300 Sobic006G272200--Sobic001G370300 Sobic006G233000 Sobic006G233000 Sobic006G272200--Sobic006G233000 Sobic008G009600 Sobic008G009600 Sobic006G272200--Sobic008G009600 Sobic002G394800--Sobic006G233300 Sobic002G394800--Sobic002G143900 Sobic002G394800--Sobic006G233000 Sobic002G394800--Sobic002G280600 Sobic006G245700 Sobic006G245700 Sobic002G394800--Sobic006G245700 Sobic002G394800--Sobic006G272200 Sobic002G394800--Sobic001G370300 Sobic004G249300 Sobic004G249300 Sobic002G394800--Sobic004G249300 Sobic002G430900 Sobic002G430900 Sobic002G394800--Sobic002G430900 Sobic001G143500 Sobic001G143500 Sobic003G439800--Sobic001G143500 Sobic006G252700 Sobic006G252700 Sobic003G439800--Sobic006G252700 Sobic006G278700 Sobic006G278700 Sobic003G439800--Sobic006G278700 Sobic010G018700 Sobic010G018700 Sobic003G439800--Sobic010G018700 Sobic002G268400 Sobic002G268400 Sobic003G439800--Sobic002G268400 Sobic001G142100 Sobic001G142100 Sobic003G439800--Sobic001G142100 Sobic009G058500 Sobic009G058500 Sobic003G439800--Sobic009G058500 Sobic003G401100 Sobic003G401100 Sobic003G439800--Sobic003G401100 Sobic010G279700 Sobic010G279700 Sobic003G439800--Sobic010G279700 Sobic001G042200 Sobic001G042200 Sobic010G232900--Sobic001G042200 Sobic010G232900--Sobic007G027700 Sobic010G232900--Sobic008G127400 Sobic010G232900--Sobic010G239800 Sobic010G232900--Sobic002G280600 Sobic003G187200 Sobic003G187200 Sobic010G232900--Sobic003G187200 Sobic003G006400 Sobic003G006400 Sobic010G232900--Sobic003G006400 Sobic006G204800 Sobic006G204800 Sobic010G232900--Sobic006G204800 Sobic010G232900--Sobic001G526300 Sobic007G091600 Sobic007G091600 Sobic010G037400--Sobic007G091600 Sobic010G000300 Sobic010G000300 Sobic010G037400--Sobic010G000300 Sobic010G266500 Sobic010G266500 Sobic010G037400--Sobic010G266500 Sobic001G249700 Sobic001G249700 Sobic010G037400--Sobic001G249700 Sobic001G114500 Sobic001G114500 Sobic010G037400--Sobic001G114500 Sobic003G220700 Sobic003G220700 Sobic010G037400--Sobic003G220700 Sobic010G037400--Sobic004G186000 Sobic009G164000 Sobic009G164000 Sobic010G037400--Sobic009G164000 Sobic002G242200 Sobic002G242200 Sobic010G037400--Sobic002G242200 Sobic005G178700 Sobic005G178700 Sobic006G067900--Sobic005G178700 Sobic001G401400 Sobic001G401400 Sobic006G067900--Sobic001G401400 Sobic006G067900--Sobic002G014600 Sobic002G399200 Sobic002G399200 Sobic006G067900--Sobic002G399200 Sobic010G247400 Sobic010G247400 Sobic006G067900--Sobic010G247400 Sobic006G067900--Sobic001G370300 Sobic001G422500 Sobic001G422500 Sobic006G067900--Sobic001G422500 Sobic004G235500 Sobic004G235500 Sobic006G067900--Sobic004G235500 Sobic006G242300 Sobic006G242300 Sobic006G067900--Sobic006G242300
Octagon: transcription factors


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