Gene annotation
Transcriptome id Sobic.002G062800.1,Sobic.002G062800.2,Sobic.002G062800.3,Sobic.002G062800.4
Synonym Sb02g005230
Functional annotation NB-ARC domain containing protein, expressed
UniProt C5XBV3
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF576
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46530 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g46210.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK12047 , KQJ87184 , KQJ87182 , KQJ87183
Barley HORVU3Hr1G002150.1 , HORVU3Hr1G002150.3 , HORVU3Hr1G002150.2 , HORVU3Hr1G002150.5 , HORVU3Hr1G002150.4 , HORVU3Hr1G002150.9 , HORVU3Hr1G002150.8
Wheat TraesCS5B02G540300 , TraesCS7D02G004800 , TraesCS4A02G493300 , TraesCS7D02G007600 , TraesCS1D02G051400 , TraesCS2D02G042200 , TraesCS7A02G007900 , TraesCS7A02G004400 , TraesCS5D02G548500 , TraesCS4A02G488400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G062900 NB-ARC domain containing protein, expressed -
2 Sobic.006G242000 oryzain beta chain precursor, putative, expressed -
3 Sobic.004G345800 Peroxisomal 3-ketoacyl-CoA thiolase 3 PKT3 (At)(PubMedID : 27208977)@3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
4 Sobic.006G028100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@electron transfer flavoprotein subunit beta, putative, expressed K03521: fixA, electron transfer flavoprotein beta subunit
5 Sobic.002G190500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
6 Sobic.007G216201 - -
7 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
8 Sobic.003G097100 receptor kinase ORK10, putative, expressed -
9 Sobic.002G328500 TKL_IRAK_DUF26-lc.10 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.009G016600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.004G113300 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
12 Sobic.001G130000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
13 Sobic.002G324000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@isocitrate lyase, putative, expressed K01637: E4.1.3.1, isocitrate lyase
14 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
15 Sobic.005G133200 disease resistance RPP13-like protein 1, putative, expressed -
16 Sobic.001G392400 expressed protein -
17 Sobic.004G182600 expressed protein -
18 Sobic.003G022600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
19 Sobic.004G050200 Strongly up-regulated in leaf samples inoculated with S. reilianum f. sp. zeae but not S. reilianum f. sp. reilianum(PubMedID : 22670753)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@function as typical DFRs by accepting dihydroflavonol substrates(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
20 Sobic.002G315800 Papain family cysteine protease domain containing protein, expressed K01363: cathepsin B


Gene co-expression network
sample Sobic002G062800 Sobic002G062800 Sobic002G062900 Sobic002G062900 Sobic002G062800--Sobic002G062900 Sobic006G242000 Sobic006G242000 Sobic002G062800--Sobic006G242000 Sobic004G345800 Sobic004G345800 Sobic002G062800--Sobic004G345800 Sobic006G028100 Sobic006G028100 Sobic002G062800--Sobic006G028100 Sobic002G190500 Sobic002G190500 Sobic002G062800--Sobic002G190500 Sobic007G216201 Sobic007G216201 Sobic002G062800--Sobic007G216201 Sobic009G034700 Sobic009G034700 Sobic002G062800--Sobic009G034700 Sobic003G097100 Sobic003G097100 Sobic002G062800--Sobic003G097100 Sobic002G328500 Sobic002G328500 Sobic002G062800--Sobic002G328500 Sobic002G062900--Sobic002G062800 Sobic002G062900--Sobic004G345800 Sobic002G062900--Sobic002G190500 Sobic002G087800 Sobic002G087800 Sobic002G062900--Sobic002G087800 Sobic002G324000 Sobic002G324000 Sobic002G062900--Sobic002G324000 Sobic002G062900--Sobic007G216201 Sobic004G333200 Sobic004G333200 Sobic002G062900--Sobic004G333200 Sobic007G163901 Sobic007G163901 Sobic002G062900--Sobic007G163901 Sobic001G474500 Sobic001G474500 Sobic002G062900--Sobic001G474500 Sobic006G242000--Sobic003G097100 Sobic006G242000--Sobic006G028100 Sobic002G217200 Sobic002G217200 Sobic006G242000--Sobic002G217200 Sobic004G174100 Sobic004G174100 Sobic006G242000--Sobic004G174100 Sobic007G135000 Sobic007G135000 Sobic006G242000--Sobic007G135000 Sobic002G130700 Sobic002G130700 Sobic006G242000--Sobic002G130700 Sobic003G022600 Sobic003G022600 Sobic006G242000--Sobic003G022600 Sobic005G064800 Sobic005G064800 Sobic006G242000--Sobic005G064800 Sobic001G320200 Sobic001G320200 Sobic006G242000--Sobic001G320200 Sobic003G061800 Sobic003G061800 Sobic004G345800--Sobic003G061800 Sobic004G345800--Sobic001G474500 Sobic003G184900 Sobic003G184900 Sobic004G345800--Sobic003G184900 Sobic003G388251 Sobic003G388251 Sobic004G345800--Sobic003G388251 Sobic008G079300 Sobic008G079300 Sobic004G345800--Sobic008G079300 Sobic007G068100 Sobic007G068100 Sobic004G345800--Sobic007G068100 Sobic009G057300 Sobic009G057300 Sobic004G345800--Sobic009G057300 Sobic006G127100 Sobic006G127100 Sobic004G345800--Sobic006G127100 Sobic004G321800 Sobic004G321800 Sobic004G345800--Sobic004G321800 Sobic006G028100--Sobic006G242000 Sobic004G182600 Sobic004G182600 Sobic006G028100--Sobic004G182600 Sobic006G028100--Sobic004G345800 Sobic001G130000 Sobic001G130000 Sobic006G028100--Sobic001G130000 Sobic006G028100--Sobic003G097100 Sobic006G028100--Sobic003G061800 Sobic001G392400 Sobic001G392400 Sobic006G028100--Sobic001G392400 Sobic002G315800 Sobic002G315800 Sobic006G028100--Sobic002G315800 Sobic006G157600 Sobic006G157600 Sobic006G028100--Sobic006G157600 Sobic002G190500--Sobic002G324000 Sobic004G113300 Sobic004G113300 Sobic002G190500--Sobic004G113300 Sobic005G130400 Sobic005G130400 Sobic002G190500--Sobic005G130400 Sobic004G050200 Sobic004G050200 Sobic002G190500--Sobic004G050200 Sobic002G190500--Sobic003G184900 Sobic002G190500--Sobic004G345800 Sobic002G190500--Sobic004G321800 Sobic002G190500--Sobic007G216201 Sobic002G190500--Sobic008G079300 Sobic001G520400 Sobic001G520400 Sobic007G216201--Sobic001G520400 Sobic007G216201--Sobic002G190500 Sobic007G216201--Sobic002G324000 Sobic007G216201--Sobic004G050200 Sobic007G216201--Sobic004G113300 Sobic007G216201--Sobic004G345800 Sobic007G216201--Sobic003G184900 Sobic007G216201--Sobic008G079300 Sobic004G060900 Sobic004G060900 Sobic007G216201--Sobic004G060900 Sobic005G178100 Sobic005G178100 Sobic009G034700--Sobic005G178100 Sobic009G034700--Sobic003G388251 Sobic004G124200 Sobic004G124200 Sobic009G034700--Sobic004G124200 Sobic009G034700--Sobic001G474500 Sobic001G069900 Sobic001G069900 Sobic009G034700--Sobic001G069900 Sobic006G028900 Sobic006G028900 Sobic009G034700--Sobic006G028900 Sobic009G034700--Sobic008G079300 Sobic001G325200 Sobic001G325200 Sobic009G034700--Sobic001G325200 Sobic001G015500 Sobic001G015500 Sobic009G034700--Sobic001G015500 Sobic003G097100--Sobic007G135000 Sobic003G097100--Sobic006G242000 Sobic009G241300 Sobic009G241300 Sobic003G097100--Sobic009G241300 Sobic003G097100--Sobic006G028100 Sobic003G097100--Sobic001G320200 Sobic009G241400 Sobic009G241400 Sobic003G097100--Sobic009G241400 Sobic003G097100--Sobic003G022600 Sobic001G469500 Sobic001G469500 Sobic003G097100--Sobic001G469500 Sobic003G097100--Sobic002G130700 Sobic009G226600 Sobic009G226600 Sobic002G328500--Sobic009G226600 Sobic002G328500--Sobic002G087800 Sobic002G328500--Sobic004G050200 Sobic005G024900 Sobic005G024900 Sobic002G328500--Sobic005G024900 Sobic002G328500--Sobic002G190500 Sobic001G491800 Sobic001G491800 Sobic002G328500--Sobic001G491800 Sobic002G328500--Sobic005G130400 Sobic003G241500 Sobic003G241500 Sobic002G328500--Sobic003G241500 Sobic002G328500--Sobic002G324000
Octagon: transcription factors


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