Gene annotation
Transcriptome id Sobic.002G096201.1
Synonym -
Functional annotation -
UniProt A0A1W0W2Z4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G273500 endoglucanase, putative, expressed K01179: endoglucanase
2 Sobic.010G143600 ATP-binding region, ATPase-like domain containing protein, expressed -
3 Sobic.009G187700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
4 Sobic.007G116500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
5 Sobic.003G196400 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
6 Sobic.003G184666 - -
7 Sobic.004G056300 transglycosylase SLT domain containing protein, expressed -
8 Sobic.002G007500 3-5 exonuclease domain-containing protein, putative, expressed -
9 Sobic.009G180300 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
10 Sobic.008G057500 Aldehyde dehydrogenase 3 H1(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
11 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
12 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
13 Sobic.004G089400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
14 Sobic.002G235900 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
15 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
16 Sobic.010G211100 expressed protein -
17 Sobic.004G194100 expressed protein -
18 Sobic.003G299500 expressed protein -
19 Sobic.004G278900 regulatory protein, putative, expressed -
20 Sobic.009G090500 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase


Gene co-expression network
sample Sobic002G096201 Sobic002G096201 Sobic002G273500 Sobic002G273500 Sobic002G096201--Sobic002G273500 Sobic010G143600 Sobic010G143600 Sobic002G096201--Sobic010G143600 Sobic009G187700 Sobic009G187700 Sobic002G096201--Sobic009G187700 Sobic007G116500 Sobic007G116500 Sobic002G096201--Sobic007G116500 Sobic003G196400 Sobic003G196400 Sobic002G096201--Sobic003G196400 Sobic003G184666 Sobic003G184666 Sobic002G096201--Sobic003G184666 Sobic004G056300 Sobic004G056300 Sobic002G096201--Sobic004G056300 Sobic002G007500 Sobic002G007500 Sobic002G096201--Sobic002G007500 Sobic009G180300 Sobic009G180300 Sobic002G096201--Sobic009G180300 Sobic002G273500--Sobic009G187700 Sobic010G211100 Sobic010G211100 Sobic002G273500--Sobic010G211100 Sobic002G273500--Sobic009G180300 Sobic006G034200 Sobic006G034200 Sobic002G273500--Sobic006G034200 Sobic004G089400 Sobic004G089400 Sobic002G273500--Sobic004G089400 Sobic006G067300 Sobic006G067300 Sobic002G273500--Sobic006G067300 Sobic005G006701 Sobic005G006701 Sobic002G273500--Sobic005G006701 Sobic004G038850 Sobic004G038850 Sobic002G273500--Sobic004G038850 Sobic004G149200 Sobic004G149200 Sobic002G273500--Sobic004G149200 Sobic005G078700 Sobic005G078700 Sobic010G143600--Sobic005G078700 Sobic002G173400 Sobic002G173400 Sobic010G143600--Sobic002G173400 Sobic003G194800 Sobic003G194800 Sobic010G143600--Sobic003G194800 Sobic009G120400 Sobic009G120400 Sobic010G143600--Sobic009G120400 Sobic003G183466 Sobic003G183466 Sobic010G143600--Sobic003G183466 Sobic003G204100 Sobic003G204100 Sobic010G143600--Sobic003G204100 Sobic006G008300 Sobic006G008300 Sobic010G143600--Sobic006G008300 Sobic003G397100 Sobic003G397100 Sobic010G143600--Sobic003G397100 Sobic010G143600--Sobic003G184666 Sobic009G187700--Sobic009G180300 Sobic007G068700 Sobic007G068700 Sobic009G187700--Sobic007G068700 Sobic003G062900 Sobic003G062900 Sobic009G187700--Sobic003G062900 Sobic001G153800 Sobic001G153800 Sobic009G187700--Sobic001G153800 Sobic006G059400 Sobic006G059400 Sobic009G187700--Sobic006G059400 Sobic003G070200 Sobic003G070200 Sobic009G187700--Sobic003G070200 Sobic001G359100 Sobic001G359100 Sobic009G187700--Sobic001G359100 Sobic002G334400 Sobic002G334400 Sobic009G187700--Sobic002G334400 Sobic002G260100 Sobic002G260100 Sobic009G187700--Sobic002G260100 Sobic007G116500--Sobic009G187700 Sobic007G116500--Sobic002G007500 Sobic001G530700 Sobic001G530700 Sobic007G116500--Sobic001G530700 Sobic007G116500--Sobic009G180300 Sobic004G028900 Sobic004G028900 Sobic007G116500--Sobic004G028900 Sobic001G196600 Sobic001G196600 Sobic007G116500--Sobic001G196600 Sobic001G154300 Sobic001G154300 Sobic007G116500--Sobic001G154300 Sobic004G017500 Sobic004G017500 Sobic007G116500--Sobic004G017500 Sobic003G347400 Sobic003G347400 Sobic007G116500--Sobic003G347400 Sobic001G355300 Sobic001G355300 Sobic003G196400--Sobic001G355300 Sobic003G180700 Sobic003G180700 Sobic003G196400--Sobic003G180700 Sobic007G219300 Sobic007G219300 Sobic003G196400--Sobic007G219300 Sobic001G092650 Sobic001G092650 Sobic003G196400--Sobic001G092650 Sobic006G018000 Sobic006G018000 Sobic003G196400--Sobic006G018000 Sobic002G298500 Sobic002G298500 Sobic003G196400--Sobic002G298500 Sobic007G083500 Sobic007G083500 Sobic003G196400--Sobic007G083500 Sobic008G046300 Sobic008G046300 Sobic003G196400--Sobic008G046300 Sobic009G067100 Sobic009G067100 Sobic003G196400--Sobic009G067100 Sobic010G252200 Sobic010G252200 Sobic003G184666--Sobic010G252200 Sobic003G184666--Sobic005G078700 Sobic003G184666--Sobic010G143600 Sobic003G184666--Sobic003G183466 Sobic006G126800 Sobic006G126800 Sobic003G184666--Sobic006G126800 Sobic003G325900 Sobic003G325900 Sobic003G184666--Sobic003G325900 Sobic003G045450 Sobic003G045450 Sobic003G184666--Sobic003G045450 Sobic002G362200 Sobic002G362200 Sobic003G184666--Sobic002G362200 Sobic004G222150 Sobic004G222150 Sobic003G184666--Sobic004G222150 Sobic004G056300--Sobic006G059400 Sobic004G056300--Sobic001G359100 Sobic004G056300--Sobic003G070200 Sobic004G056300--Sobic002G334400 Sobic004G056300--Sobic001G153800 Sobic004G056300--Sobic003G062900 Sobic002G305400 Sobic002G305400 Sobic004G056300--Sobic002G305400 Sobic004G056300--Sobic002G260100 Sobic009G087900 Sobic009G087900 Sobic004G056300--Sobic009G087900 Sobic008G163900 Sobic008G163900 Sobic002G007500--Sobic008G163900 Sobic002G007500--Sobic009G180300 Sobic002G007500--Sobic004G017500 Sobic002G007500--Sobic006G067300 Sobic002G121100 Sobic002G121100 Sobic002G007500--Sobic002G121100 Sobic008G057500 Sobic008G057500 Sobic002G007500--Sobic008G057500 Sobic010G043300 Sobic010G043300 Sobic002G007500--Sobic010G043300 Sobic002G007500--Sobic004G089400 Sobic002G007500--Sobic009G187700 Sobic009G180300--Sobic009G187700 Sobic009G180300--Sobic006G067300 Sobic009G180300--Sobic002G007500 Sobic009G180300--Sobic004G089400 Sobic009G180300--Sobic005G006701 Sobic009G180300--Sobic003G062900 Sobic009G180300--Sobic008G057500 Sobic009G180300--Sobic002G260100 Sobic009G180300--Sobic004G149200
Octagon: transcription factors


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