Gene annotation
Transcriptome id Sobic.002G144800.1
Synonym 1, Sb02g014250, CYCD3
Functional annotation cyclin, putative, expressed
UniProt C5X7D4
Pfam PF00134
Panther DB PTHR10177:SF242 PTHR10177
NCBI CDD -
KEGG Orthology K14505; cyclin D3, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34160 : CYCLIN D3;1
RAP-DB (Rice) LOC_Os09g02360.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a013454 , Zm00025a045961
Brachypodium -
Barley -
Wheat TraesCS5A02G161000 , TraesCS5D02G165900
Populus -


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cDNA sequences
Sobic.002G144800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G017500 GRAS family transcription factor domain containing protein, expressed -
2 Sobic.003G311600 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
3 Sobic.001G461800 zinc finger family protein, putative, expressed -
4 Sobic.001G434700 phosphomevalonate kinase, putative, expressed K00938: E2.7.4.2, phosphomevalonate kinase
5 Sobic.010G097500 DNA polymerase lambda, putative, expressed K03512: DNA polymerase lambda
6 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
7 Sobic.002G340200 expressed protein -
8 Sobic.002G187600 expressed protein -
9 Sobic.002G155100 bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed K12524: bifunctional aspartokinase / homoserine dehydrogenase 1
10 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
11 Sobic.008G101900 plastid division regulator MinE, putative, expressed -
12 Sobic.001G371700 zinc finger protein, putative, expressed -
13 Sobic.001G166200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
14 Sobic.003G250000 peroxidase family protein, expressed K00430: peroxidase
15 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
16 Sobic.010G188000 elongation factor, putative, expressed K12852: 116 kDa U5 small nuclear ribonucleoprotein component
17 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
18 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
19 Sobic.008G088842 - -
20 Sobic.006G193500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G144800 Sobic002G144800 Sobic005G017500 Sobic005G017500 Sobic002G144800--Sobic005G017500 Sobic003G311600 Sobic003G311600 Sobic002G144800--Sobic003G311600 Sobic001G461800 Sobic001G461800 Sobic002G144800--Sobic001G461800 Sobic001G434700 Sobic001G434700 Sobic002G144800--Sobic001G434700 Sobic010G097500 Sobic010G097500 Sobic002G144800--Sobic010G097500 Sobic003G223000 Sobic003G223000 Sobic002G144800--Sobic003G223000 Sobic002G340200 Sobic002G340200 Sobic002G144800--Sobic002G340200 Sobic002G187600 Sobic002G187600 Sobic002G144800--Sobic002G187600 Sobic002G155100 Sobic002G155100 Sobic002G144800--Sobic002G155100 Sobic008G052300 Sobic008G052300 Sobic005G017500--Sobic008G052300 Sobic004G269100 Sobic004G269100 Sobic005G017500--Sobic004G269100 Sobic005G017500--Sobic001G461800 Sobic003G250000 Sobic003G250000 Sobic005G017500--Sobic003G250000 Sobic003G102700 Sobic003G102700 Sobic005G017500--Sobic003G102700 Sobic002G259200 Sobic002G259200 Sobic005G017500--Sobic002G259200 Sobic002G286700 Sobic002G286700 Sobic005G017500--Sobic002G286700 Sobic001G199500 Sobic001G199500 Sobic005G017500--Sobic001G199500 Sobic003G104100 Sobic003G104100 Sobic005G017500--Sobic003G104100 Sobic007G070000 Sobic007G070000 Sobic003G311600--Sobic007G070000 Sobic008G088842 Sobic008G088842 Sobic003G311600--Sobic008G088842 Sobic003G311600--Sobic003G104100 Sobic001G165801 Sobic001G165801 Sobic003G311600--Sobic001G165801 Sobic006G236000 Sobic006G236000 Sobic003G311600--Sobic006G236000 Sobic003G311600--Sobic002G340200 Sobic007G094500 Sobic007G094500 Sobic003G311600--Sobic007G094500 Sobic003G135500 Sobic003G135500 Sobic003G311600--Sobic003G135500 Sobic002G162500 Sobic002G162500 Sobic003G311600--Sobic002G162500 Sobic001G461800--Sobic003G250000 Sobic004G164700 Sobic004G164700 Sobic001G461800--Sobic004G164700 Sobic003G291000 Sobic003G291000 Sobic001G461800--Sobic003G291000 Sobic001G461800--Sobic002G286700 Sobic008G190000 Sobic008G190000 Sobic001G461800--Sobic008G190000 Sobic003G078300 Sobic003G078300 Sobic001G461800--Sobic003G078300 Sobic004G253500 Sobic004G253500 Sobic001G461800--Sobic004G253500 Sobic001G381100 Sobic001G381100 Sobic001G461800--Sobic001G381100 Sobic006G241800 Sobic006G241800 Sobic001G461800--Sobic006G241800 Sobic005G031000 Sobic005G031000 Sobic001G434700--Sobic005G031000 Sobic006G237000 Sobic006G237000 Sobic001G434700--Sobic006G237000 Sobic004G247100 Sobic004G247100 Sobic001G434700--Sobic004G247100 Sobic010G155600 Sobic010G155600 Sobic001G434700--Sobic010G155600 Sobic008G059900 Sobic008G059900 Sobic001G434700--Sobic008G059900 Sobic009G020100 Sobic009G020100 Sobic001G434700--Sobic009G020100 Sobic003G230600 Sobic003G230600 Sobic001G434700--Sobic003G230600 Sobic004G356200 Sobic004G356200 Sobic001G434700--Sobic004G356200 Sobic008G097600 Sobic008G097600 Sobic001G434700--Sobic008G097600 Sobic010G153300 Sobic010G153300 Sobic010G097500--Sobic010G153300 Sobic007G059700 Sobic007G059700 Sobic010G097500--Sobic007G059700 Sobic002G043000 Sobic002G043000 Sobic010G097500--Sobic002G043000 Sobic009G177200 Sobic009G177200 Sobic010G097500--Sobic009G177200 Sobic006G008300 Sobic006G008300 Sobic010G097500--Sobic006G008300 Sobic004G215900 Sobic004G215900 Sobic010G097500--Sobic004G215900 Sobic010G097500--Sobic003G104100 Sobic006G273900 Sobic006G273900 Sobic010G097500--Sobic006G273900 Sobic010G097500--Sobic001G199500 Sobic003G333700 Sobic003G333700 Sobic003G223000--Sobic003G333700 Sobic002G078000 Sobic002G078000 Sobic003G223000--Sobic002G078000 Sobic008G101900 Sobic008G101900 Sobic003G223000--Sobic008G101900 Sobic009G002900 Sobic009G002900 Sobic003G223000--Sobic009G002900 Sobic003G223000--Sobic009G177200 Sobic009G231100 Sobic009G231100 Sobic003G223000--Sobic009G231100 Sobic003G223000--Sobic001G165801 Sobic001G104300 Sobic001G104300 Sobic003G223000--Sobic001G104300 Sobic002G272400 Sobic002G272400 Sobic003G223000--Sobic002G272400 Sobic002G340200--Sobic007G070000 Sobic002G340200--Sobic008G088842 Sobic002G340200--Sobic002G162500 Sobic002G340200--Sobic003G311600 Sobic010G089800 Sobic010G089800 Sobic002G340200--Sobic010G089800 Sobic002G051800 Sobic002G051800 Sobic002G340200--Sobic002G051800 Sobic001G300900 Sobic001G300900 Sobic002G340200--Sobic001G300900 Sobic007G159200 Sobic007G159200 Sobic002G340200--Sobic007G159200 Sobic010G138900 Sobic010G138900 Sobic002G340200--Sobic010G138900 Sobic002G095300 Sobic002G095300 Sobic002G187600--Sobic002G095300 Sobic008G118100 Sobic008G118100 Sobic002G187600--Sobic008G118100 Sobic007G050800 Sobic007G050800 Sobic002G187600--Sobic007G050800 Sobic002G187600--Sobic003G102700 Sobic004G286200 Sobic004G286200 Sobic002G187600--Sobic004G286200 Sobic008G090400 Sobic008G090400 Sobic002G187600--Sobic008G090400 Sobic007G187700 Sobic007G187700 Sobic002G187600--Sobic007G187700 Sobic002G187600--Sobic001G199500 Sobic003G290400 Sobic003G290400 Sobic002G187600--Sobic003G290400 Sobic006G193500 Sobic006G193500 Sobic002G155100--Sobic006G193500 Sobic002G126800 Sobic002G126800 Sobic002G155100--Sobic002G126800 Sobic003G432300 Sobic003G432300 Sobic002G155100--Sobic003G432300 Sobic002G155100--Sobic006G237000 Sobic002G155100--Sobic003G102700 Sobic005G028100 Sobic005G028100 Sobic002G155100--Sobic005G028100 Sobic001G373000 Sobic001G373000 Sobic002G155100--Sobic001G373000 Sobic002G155100--Sobic001G199500 Sobic001G013300 Sobic001G013300 Sobic002G155100--Sobic001G013300
Octagon: transcription factors


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