Gene annotation
Transcriptome id Sobic.002G176200.1
Synonym Sb02g022510
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
membrane protein, putative, expressed
UniProt C5XAJ1
Pfam PF01925
Panther DB PTHR14255 PTHR14255:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G25737 : Sulfite exporter TauE/SafE family protein
RAP-DB (Rice) LOC_Os09g17600.3 : membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a046600
Brachypodium KQJ98070 , KQJ98069 , KQJ98068 , KQJ89894 , KQJ89895 , PNT68013 , PNT68012 , PNT68011
Barley HORVU5Hr1G041530.26 , HORVU5Hr1G041530.24 , HORVU5Hr1G041530.23 , HORVU5Hr1G041530.22 , HORVU5Hr1G041530.21 , HORVU5Hr1G041530.20 , HORVU5Hr1G041530.18 , HORVU5Hr1G041530.19 , HORVU5Hr1G041530.16 , HORVU5Hr1G041530.17 , HORVU5Hr1G041530.14 , HORVU5Hr1G041530.15 , HORVU5Hr1G041530.12 , HORVU5Hr1G041530.13 , HORVU5Hr1G041530.10 , HORVU5Hr1G041530.11 , HORVU5Hr1G041530.8 , HORVU5Hr1G041530.9 , HORVU5Hr1G041530.4 , HORVU5Hr1G041530.5 , HORVU5Hr1G041530.6 , HORVU5Hr1G041530.7 , HORVU5Hr1G041530.1 , HORVU5Hr1G041530.2 , HORVU5Hr1G041530.3
Wheat TraesCS5D02G191500 , TraesCS5A02G186300 , TraesCS5B02G184700
Populus -


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cDNA sequences
Sobic.002G176200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
2 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
3 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
4 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
5 Sobic.001G496100 - -
6 Sobic.002G338100 THYLAKOID FORMATION1, chloroplast precursor, putative, expressed -
7 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
8 Sobic.010G205200 Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.010G227800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metal transporter Nramp6, putative, expressed -
10 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
11 Sobic.003G174301 - -
12 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
13 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
14 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
15 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
16 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
17 Sobic.003G388251 - K01166: ribonuclease T2
18 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
19 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase


Gene co-expression network
sample Sobic002G176200 Sobic002G176200 Sobic003G398100 Sobic003G398100 Sobic002G176200--Sobic003G398100 Sobic005G149700 Sobic005G149700 Sobic002G176200--Sobic005G149700 Sobic004G266400 Sobic004G266400 Sobic002G176200--Sobic004G266400 Sobic009G207600 Sobic009G207600 Sobic002G176200--Sobic009G207600 Sobic001G496100 Sobic001G496100 Sobic002G176200--Sobic001G496100 Sobic002G338100 Sobic002G338100 Sobic002G176200--Sobic002G338100 Sobic001G504900 Sobic001G504900 Sobic002G176200--Sobic001G504900 Sobic010G205200 Sobic010G205200 Sobic002G176200--Sobic010G205200 Sobic010G227800 Sobic010G227800 Sobic002G176200--Sobic010G227800 Sobic006G199000 Sobic006G199000 Sobic003G398100--Sobic006G199000 Sobic008G153400 Sobic008G153400 Sobic003G398100--Sobic008G153400 Sobic003G398100--Sobic009G207600 Sobic003G398100--Sobic001G504900 Sobic003G257100 Sobic003G257100 Sobic003G398100--Sobic003G257100 Sobic003G398100--Sobic001G496100 Sobic003G355600 Sobic003G355600 Sobic003G398100--Sobic003G355600 Sobic003G322700 Sobic003G322700 Sobic003G398100--Sobic003G322700 Sobic001G150600 Sobic001G150600 Sobic003G398100--Sobic001G150600 Sobic004G034600 Sobic004G034600 Sobic005G149700--Sobic004G034600 Sobic005G149700--Sobic001G504900 Sobic002G266000 Sobic002G266000 Sobic005G149700--Sobic002G266000 Sobic002G128200 Sobic002G128200 Sobic005G149700--Sobic002G128200 Sobic006G104600 Sobic006G104600 Sobic005G149700--Sobic006G104600 Sobic009G011600 Sobic009G011600 Sobic005G149700--Sobic009G011600 Sobic005G149700--Sobic009G207600 Sobic003G174301 Sobic003G174301 Sobic005G149700--Sobic003G174301 Sobic005G149700--Sobic003G398100 Sobic006G043600 Sobic006G043600 Sobic004G266400--Sobic006G043600 Sobic006G204900 Sobic006G204900 Sobic004G266400--Sobic006G204900 Sobic002G159700 Sobic002G159700 Sobic004G266400--Sobic002G159700 Sobic001G016700 Sobic001G016700 Sobic004G266400--Sobic001G016700 Sobic010G224000 Sobic010G224000 Sobic004G266400--Sobic010G224000 Sobic004G266400--Sobic003G322700 Sobic001G462500 Sobic001G462500 Sobic004G266400--Sobic001G462500 Sobic001G121200 Sobic001G121200 Sobic004G266400--Sobic001G121200 Sobic001G207400 Sobic001G207400 Sobic004G266400--Sobic001G207400 Sobic009G207600--Sobic001G504900 Sobic009G207600--Sobic003G398100 Sobic009G207600--Sobic002G338100 Sobic008G079300 Sobic008G079300 Sobic009G207600--Sobic008G079300 Sobic001G474500 Sobic001G474500 Sobic009G207600--Sobic001G474500 Sobic009G207600--Sobic008G153400 Sobic009G207600--Sobic001G496100 Sobic006G091700 Sobic006G091700 Sobic009G207600--Sobic006G091700 Sobic003G087200 Sobic003G087200 Sobic009G207600--Sobic003G087200 Sobic001G496100--Sobic003G398100 Sobic001G496100--Sobic009G207600 Sobic001G496100--Sobic009G011600 Sobic009G006400 Sobic009G006400 Sobic001G496100--Sobic009G006400 Sobic001G496100--Sobic006G199000 Sobic004G225200 Sobic004G225200 Sobic001G496100--Sobic004G225200 Sobic001G496100--Sobic002G266000 Sobic001G496100--Sobic005G149700 Sobic001G496100--Sobic008G153400 Sobic002G338100--Sobic009G207600 Sobic002G338100--Sobic001G504900 Sobic002G338100--Sobic003G398100 Sobic001G176600 Sobic001G176600 Sobic002G338100--Sobic001G176600 Sobic002G338100--Sobic008G153400 Sobic002G338100--Sobic001G474500 Sobic002G338100--Sobic006G091700 Sobic009G034700 Sobic009G034700 Sobic002G338100--Sobic009G034700 Sobic006G181300 Sobic006G181300 Sobic002G338100--Sobic006G181300 Sobic001G504900--Sobic009G207600 Sobic001G504900--Sobic003G398100 Sobic004G261900 Sobic004G261900 Sobic001G504900--Sobic004G261900 Sobic001G504900--Sobic005G149700 Sobic001G504900--Sobic002G266000 Sobic001G504900--Sobic002G338100 Sobic001G069900 Sobic001G069900 Sobic001G504900--Sobic001G069900 Sobic001G504900--Sobic006G181300 Sobic001G015500 Sobic001G015500 Sobic001G504900--Sobic001G015500 Sobic003G428400 Sobic003G428400 Sobic010G205200--Sobic003G428400 Sobic010G205200--Sobic001G069900 Sobic006G028900 Sobic006G028900 Sobic010G205200--Sobic006G028900 Sobic010G112300 Sobic010G112300 Sobic010G205200--Sobic010G112300 Sobic010G205200--Sobic001G015500 Sobic001G301700 Sobic001G301700 Sobic010G205200--Sobic001G301700 Sobic010G205200--Sobic001G474500 Sobic001G325200 Sobic001G325200 Sobic010G205200--Sobic001G325200 Sobic007G186200 Sobic007G186200 Sobic010G205200--Sobic007G186200 Sobic010G227800--Sobic002G128200 Sobic007G201500 Sobic007G201500 Sobic010G227800--Sobic007G201500 Sobic010G205100 Sobic010G205100 Sobic010G227800--Sobic010G205100 Sobic010G217600 Sobic010G217600 Sobic010G227800--Sobic010G217600 Sobic005G053200 Sobic005G053200 Sobic010G227800--Sobic005G053200 Sobic001G375100 Sobic001G375100 Sobic010G227800--Sobic001G375100 Sobic002G305000 Sobic002G305000 Sobic010G227800--Sobic002G305000 Sobic006G064100 Sobic006G064100 Sobic010G227800--Sobic006G064100 Sobic003G021100 Sobic003G021100 Sobic010G227800--Sobic003G021100
Octagon: transcription factors


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