Gene annotation
Transcriptome id Sobic.002G185900.1
Synonym Sb02g023390
Functional annotation zinc finger protein-related, putative, expressed
UniProt A0A1B6QC73
Pfam PF13920
Panther DB PTHR10044 PTHR10044:SF133
NCBI CDD KOG3362; Predicted BBOX Zn-finger protein KOG4172Predicted E3 ubiquitin ligase KOG1100Predicted E3 ubiquitin ligase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35330 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os09g20550.1 : zinc finger protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a046744
Brachypodium KQJ90048
Barley HORVU5Hr1G058760.3 , HORVU5Hr1G058760.2 , HORVU5Hr1G058760.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G185900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G252900 transcription factor IIA large subunit, putative, expressed K03122: TFIIA1, GTF2A1, transcription initiation factor TFIIA large subunit
2 Sobic.001G358500 GA20734-PA, putative, expressed -
3 Sobic.003G132000 proteasome subunit, putative, expressed K12176: COPS2, CSN2, COP9 signalosome complex subunit 2
4 Sobic.008G145100 glycosyl transferase, group 1 domain containing protein, expressed K03844: alpha-1,2-mannosyltransferase
5 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
6 Sobic.005G144201 - -
7 Sobic.006G049700 SAM domain family protein, expressed -
8 Sobic.009G131900 - K18177: cytochrome c oxidase assembly factor 4
9 Sobic.005G158300 RWD domain containing protein, expressed K10640: RNF25, E3 ubiquitin-protein ligase RNF25
10 Sobic.001G234200 actin, putative, expressed K16615: actin-related protein 7, plant
11 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
13 Sobic.001G341500 transcription initiation factor IID, putative, expressed K03133: TAF9B, transcription initiation factor TFIID subunit 9B
14 Sobic.001G019800 FAD binding domain containing protein, expressed K06126: ubiquinone biosynthesis monooxygenase Coq6
15 Sobic.009G089700 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
16 Sobic.007G177300 kinetochore protein, putative, expressed K11547: NDC80, HEC1, kinetochore protein NDC80
17 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
18 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
19 Sobic.007G014900 STIP1 homology and U box-containing protein 1, putative, expressed K09561: STUB1, STIP1 homology and U-box containing protein 1
20 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -


Gene co-expression network
sample Sobic002G185900 Sobic002G185900 Sobic004G252900 Sobic004G252900 Sobic002G185900--Sobic004G252900 Sobic001G358500 Sobic001G358500 Sobic002G185900--Sobic001G358500 Sobic003G132000 Sobic003G132000 Sobic002G185900--Sobic003G132000 Sobic008G145100 Sobic008G145100 Sobic002G185900--Sobic008G145100 Sobic001G114500 Sobic001G114500 Sobic002G185900--Sobic001G114500 Sobic005G144201 Sobic005G144201 Sobic002G185900--Sobic005G144201 Sobic006G049700 Sobic006G049700 Sobic002G185900--Sobic006G049700 Sobic009G131900 Sobic009G131900 Sobic002G185900--Sobic009G131900 Sobic005G158300 Sobic005G158300 Sobic002G185900--Sobic005G158300 Sobic006G196300 Sobic006G196300 Sobic004G252900--Sobic006G196300 Sobic004G252900--Sobic002G185900 Sobic003G264100 Sobic003G264100 Sobic004G252900--Sobic003G264100 Sobic002G117400 Sobic002G117400 Sobic004G252900--Sobic002G117400 Sobic003G379200 Sobic003G379200 Sobic004G252900--Sobic003G379200 Sobic010G275400 Sobic010G275400 Sobic004G252900--Sobic010G275400 Sobic006G039400 Sobic006G039400 Sobic004G252900--Sobic006G039400 Sobic004G028100 Sobic004G028100 Sobic004G252900--Sobic004G028100 Sobic001G019800 Sobic001G019800 Sobic004G252900--Sobic001G019800 Sobic001G428800 Sobic001G428800 Sobic001G358500--Sobic001G428800 Sobic010G192600 Sobic010G192600 Sobic001G358500--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic001G358500--Sobic008G018500 Sobic008G085700 Sobic008G085700 Sobic001G358500--Sobic008G085700 Sobic001G467100 Sobic001G467100 Sobic001G358500--Sobic001G467100 Sobic003G182300 Sobic003G182300 Sobic001G358500--Sobic003G182300 Sobic001G358500--Sobic006G039400 Sobic001G049400 Sobic001G049400 Sobic001G358500--Sobic001G049400 Sobic001G211900 Sobic001G211900 Sobic001G358500--Sobic001G211900 Sobic003G132000--Sobic001G114500 Sobic006G270600 Sobic006G270600 Sobic003G132000--Sobic006G270600 Sobic003G046300 Sobic003G046300 Sobic003G132000--Sobic003G046300 Sobic008G103300 Sobic008G103300 Sobic003G132000--Sobic008G103300 Sobic001G487100 Sobic001G487100 Sobic003G132000--Sobic001G487100 Sobic004G192900 Sobic004G192900 Sobic003G132000--Sobic004G192900 Sobic009G164000 Sobic009G164000 Sobic003G132000--Sobic009G164000 Sobic002G371700 Sobic002G371700 Sobic003G132000--Sobic002G371700 Sobic003G363700 Sobic003G363700 Sobic003G132000--Sobic003G363700 Sobic010G073100 Sobic010G073100 Sobic008G145100--Sobic010G073100 Sobic002G423800 Sobic002G423800 Sobic008G145100--Sobic002G423800 Sobic008G110500 Sobic008G110500 Sobic008G145100--Sobic008G110500 Sobic001G444300 Sobic001G444300 Sobic008G145100--Sobic001G444300 Sobic002G029300 Sobic002G029300 Sobic008G145100--Sobic002G029300 Sobic001G033500 Sobic001G033500 Sobic008G145100--Sobic001G033500 Sobic004G010900 Sobic004G010900 Sobic008G145100--Sobic004G010900 Sobic006G203100 Sobic006G203100 Sobic008G145100--Sobic006G203100 Sobic008G129600 Sobic008G129600 Sobic008G145100--Sobic008G129600 Sobic001G114500--Sobic003G132000 Sobic003G121300 Sobic003G121300 Sobic001G114500--Sobic003G121300 Sobic001G114500--Sobic008G103300 Sobic001G114500--Sobic009G164000 Sobic001G473600 Sobic001G473600 Sobic001G114500--Sobic001G473600 Sobic007G084100 Sobic007G084100 Sobic001G114500--Sobic007G084100 Sobic005G160400 Sobic005G160400 Sobic001G114500--Sobic005G160400 Sobic009G258400 Sobic009G258400 Sobic001G114500--Sobic009G258400 Sobic004G156800 Sobic004G156800 Sobic001G114500--Sobic004G156800 Sobic005G144201--Sobic008G085700 Sobic005G144201--Sobic001G358500 Sobic001G237600 Sobic001G237600 Sobic005G144201--Sobic001G237600 Sobic004G094700 Sobic004G094700 Sobic005G144201--Sobic004G094700 Sobic002G199400 Sobic002G199400 Sobic005G144201--Sobic002G199400 Sobic005G144201--Sobic003G132000 Sobic005G115500 Sobic005G115500 Sobic005G144201--Sobic005G115500 Sobic005G144201--Sobic003G363700 Sobic009G089700 Sobic009G089700 Sobic005G144201--Sobic009G089700 Sobic009G222500 Sobic009G222500 Sobic006G049700--Sobic009G222500 Sobic007G166400 Sobic007G166400 Sobic006G049700--Sobic007G166400 Sobic003G264200 Sobic003G264200 Sobic006G049700--Sobic003G264200 Sobic006G101700 Sobic006G101700 Sobic006G049700--Sobic006G101700 Sobic007G167900 Sobic007G167900 Sobic006G049700--Sobic007G167900 Sobic004G226800 Sobic004G226800 Sobic006G049700--Sobic004G226800 Sobic010G027600 Sobic010G027600 Sobic006G049700--Sobic010G027600 Sobic002G113900 Sobic002G113900 Sobic006G049700--Sobic002G113900 Sobic004G356900 Sobic004G356900 Sobic006G049700--Sobic004G356900 Sobic003G104000 Sobic003G104000 Sobic009G131900--Sobic003G104000 Sobic009G131900--Sobic006G270600 Sobic004G316700 Sobic004G316700 Sobic009G131900--Sobic004G316700 Sobic007G042900 Sobic007G042900 Sobic009G131900--Sobic007G042900 Sobic009G131900--Sobic003G182300 Sobic010G235200 Sobic010G235200 Sobic009G131900--Sobic010G235200 Sobic006G131000 Sobic006G131000 Sobic009G131900--Sobic006G131000 Sobic009G131900--Sobic008G129600 Sobic010G264000 Sobic010G264000 Sobic009G131900--Sobic010G264000 Sobic005G158300--Sobic009G131900 Sobic005G158300--Sobic005G160400 Sobic008G124900 Sobic008G124900 Sobic005G158300--Sobic008G124900 Sobic009G092400 Sobic009G092400 Sobic005G158300--Sobic009G092400 Sobic010G209000 Sobic010G209000 Sobic005G158300--Sobic010G209000 Sobic005G158300--Sobic004G252900 Sobic002G047700 Sobic002G047700 Sobic005G158300--Sobic002G047700 Sobic006G180000 Sobic006G180000 Sobic005G158300--Sobic006G180000 Sobic005G158300--Sobic003G121300
Octagon: transcription factors


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