Gene annotation
Transcriptome id Sobic.002G201500.2
Synonym Sb02g024660
Functional annotation GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed
UniProt A0A1W0W504
Pfam PF02704
Panther DB PTHR23201 PTHR23201:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74670 : Gibberellin-regulated family protein
RAP-DB (Rice) LOC_Os09g24840.1 : GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed
MaizeGDB (Corn) Zm00025a043506 , Zm00025a053745
Brachypodium PNT64563 , PNT67130 , KQJ90233 , PNT76076
Barley HORVU5Hr1G065670.1 , HORVU5Hr1G065670.2 , HORVU7Hr1G042390.3 , HORVU7Hr1G042390.2 , HORVU7Hr1G042390.7 , HORVU7Hr1G042390.6 , HORVU7Hr1G042390.5 , HORVU7Hr1G042390.4
Wheat TraesCS7A02G208100 , TraesCS7D02G210500 , TraesCS5D02G234400 , TraesCS5A02G227000 , TraesCS5B02G225600 , TraesCS7B02G115300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G138800 GCRP4 - Glycine and cysteine rich family protein precursor, expressed -
2 Sobic.009G102100 DUF538 domain containing protein, putative, expressed -
3 Sobic.003G382100 PHD finger protein, putative, expressed -
4 Sobic.004G047400 uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547, putative, expressed K06041: kdsD, arabinose-5-phosphate isomerase
5 Sobic.009G128800 expressed protein -
6 Sobic.009G185501 - -
7 Sobic.010G078300 leaf senescence related protein, putative, expressed -
8 Sobic.001G419801 - -
9 Sobic.001G005300 gibberellin 20 oxidase 1, putative, expressed K05282: gibberellin-44 dioxygenase
10 Sobic.003G245600 3-5 exonuclease domain-containing protein, putative, expressed -
11 Sobic.002G340700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@secretory carrier-associated membrane protein, putative, expressed -
12 Sobic.001G134500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@class I glutamine amidotransferase, putative, expressed -
13 Sobic.006G003951 - -
14 Sobic.006G187800 expressed protein -
15 Sobic.006G183600 IQ calmodulin-binding motif family protein, putative, expressed -
16 Sobic.002G039100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
17 Sobic.006G127350 - -
18 Sobic.001G478700 THION26 - Plant thionin family protein precursor, expressed -
19 Sobic.001G522500 bZIP family transcription factor, putative, expressed -
20 Sobic.004G105200 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic002G201500 Sobic002G201500 Sobic001G138800 Sobic001G138800 Sobic002G201500--Sobic001G138800 Sobic009G102100 Sobic009G102100 Sobic002G201500--Sobic009G102100 Sobic003G382100 Sobic003G382100 Sobic002G201500--Sobic003G382100 Sobic004G047400 Sobic004G047400 Sobic002G201500--Sobic004G047400 Sobic009G128800 Sobic009G128800 Sobic002G201500--Sobic009G128800 Sobic009G185501 Sobic009G185501 Sobic002G201500--Sobic009G185501 Sobic010G078300 Sobic010G078300 Sobic002G201500--Sobic010G078300 Sobic001G419801 Sobic001G419801 Sobic002G201500--Sobic001G419801 Sobic001G005300 Sobic001G005300 Sobic002G201500--Sobic001G005300 Sobic004G237000 Sobic004G237000 Sobic001G138800--Sobic004G237000 Sobic007G033700 Sobic007G033700 Sobic001G138800--Sobic007G033700 Sobic003G316601 Sobic003G316601 Sobic001G138800--Sobic003G316601 Sobic002G426000 Sobic002G426000 Sobic001G138800--Sobic002G426000 Sobic003G046400 Sobic003G046400 Sobic001G138800--Sobic003G046400 Sobic007G147200 Sobic007G147200 Sobic001G138800--Sobic007G147200 Sobic010G070900 Sobic010G070900 Sobic001G138800--Sobic010G070900 Sobic003G238800 Sobic003G238800 Sobic001G138800--Sobic003G238800 Sobic010G169200 Sobic010G169200 Sobic001G138800--Sobic010G169200 Sobic005G047000 Sobic005G047000 Sobic009G102100--Sobic005G047000 Sobic009G188300 Sobic009G188300 Sobic009G102100--Sobic009G188300 Sobic006G013900 Sobic006G013900 Sobic009G102100--Sobic006G013900 Sobic009G115100 Sobic009G115100 Sobic009G102100--Sobic009G115100 Sobic004G137900 Sobic004G137900 Sobic009G102100--Sobic004G137900 Sobic002G317600 Sobic002G317600 Sobic009G102100--Sobic002G317600 Sobic004G010700 Sobic004G010700 Sobic009G102100--Sobic004G010700 Sobic004G015300 Sobic004G015300 Sobic009G102100--Sobic004G015300 Sobic009G258600 Sobic009G258600 Sobic009G102100--Sobic009G258600 Sobic009G006900 Sobic009G006900 Sobic003G382100--Sobic009G006900 Sobic003G274400 Sobic003G274400 Sobic003G382100--Sobic003G274400 Sobic006G272800 Sobic006G272800 Sobic003G382100--Sobic006G272800 Sobic001G468000 Sobic001G468000 Sobic003G382100--Sobic001G468000 Sobic002G196500 Sobic002G196500 Sobic003G382100--Sobic002G196500 Sobic005G032600 Sobic005G032600 Sobic003G382100--Sobic005G032600 Sobic009G087700 Sobic009G087700 Sobic003G382100--Sobic009G087700 Sobic002G374200 Sobic002G374200 Sobic003G382100--Sobic002G374200 Sobic005G062600 Sobic005G062600 Sobic003G382100--Sobic005G062600 Sobic008G075200 Sobic008G075200 Sobic004G047400--Sobic008G075200 Sobic004G263000 Sobic004G263000 Sobic004G047400--Sobic004G263000 Sobic004G319800 Sobic004G319800 Sobic004G047400--Sobic004G319800 Sobic008G066700 Sobic008G066700 Sobic004G047400--Sobic008G066700 Sobic004G047400--Sobic009G102100 Sobic008G181400 Sobic008G181400 Sobic004G047400--Sobic008G181400 Sobic003G108000 Sobic003G108000 Sobic004G047400--Sobic003G108000 Sobic002G033000 Sobic002G033000 Sobic004G047400--Sobic002G033000 Sobic002G314800 Sobic002G314800 Sobic004G047400--Sobic002G314800 Sobic001G518000 Sobic001G518000 Sobic009G128800--Sobic001G518000 Sobic001G522300 Sobic001G522300 Sobic009G128800--Sobic001G522300 Sobic009G216300 Sobic009G216300 Sobic009G128800--Sobic009G216300 Sobic001G093000 Sobic001G093000 Sobic009G128800--Sobic001G093000 Sobic009G235700 Sobic009G235700 Sobic009G128800--Sobic009G235700 Sobic010G211800 Sobic010G211800 Sobic009G128800--Sobic010G211800 Sobic001G286400 Sobic001G286400 Sobic009G128800--Sobic001G286400 Sobic002G360500 Sobic002G360500 Sobic009G128800--Sobic002G360500 Sobic003G360700 Sobic003G360700 Sobic009G128800--Sobic003G360700 Sobic003G390700 Sobic003G390700 Sobic009G185501--Sobic003G390700 Sobic009G185501--Sobic010G078300 Sobic009G185501--Sobic010G169200 Sobic008G133200 Sobic008G133200 Sobic009G185501--Sobic008G133200 Sobic006G170100 Sobic006G170100 Sobic009G185501--Sobic006G170100 Sobic003G094600 Sobic003G094600 Sobic009G185501--Sobic003G094600 Sobic009G185501--Sobic001G138800 Sobic005G214600 Sobic005G214600 Sobic009G185501--Sobic005G214600 Sobic009G185501--Sobic002G201500 Sobic010G022000 Sobic010G022000 Sobic010G078300--Sobic010G022000 Sobic007G000700 Sobic007G000700 Sobic010G078300--Sobic007G000700 Sobic010G078300--Sobic002G314800 Sobic010G078300--Sobic001G518000 Sobic010G078300--Sobic010G211800 Sobic010G092400 Sobic010G092400 Sobic010G078300--Sobic010G092400 Sobic010G078300--Sobic009G216300 Sobic003G401800 Sobic003G401800 Sobic010G078300--Sobic003G401800 Sobic010G078300--Sobic005G062600 Sobic008G070200 Sobic008G070200 Sobic001G419801--Sobic008G070200 Sobic004G028700 Sobic004G028700 Sobic001G419801--Sobic004G028700 Sobic006G066400 Sobic006G066400 Sobic001G419801--Sobic006G066400 Sobic004G014300 Sobic004G014300 Sobic001G419801--Sobic004G014300 Sobic003G402100 Sobic003G402100 Sobic001G419801--Sobic003G402100 Sobic005G125800 Sobic005G125800 Sobic001G419801--Sobic005G125800 Sobic005G042300 Sobic005G042300 Sobic001G419801--Sobic005G042300 Sobic002G385450 Sobic002G385450 Sobic001G419801--Sobic002G385450 Sobic010G212700 Sobic010G212700 Sobic001G419801--Sobic010G212700 Sobic003G344700 Sobic003G344700 Sobic001G005300--Sobic003G344700 Sobic001G301600 Sobic001G301600 Sobic001G005300--Sobic001G301600 Sobic001G361700 Sobic001G361700 Sobic001G005300--Sobic001G361700 Sobic002G213000 Sobic002G213000 Sobic001G005300--Sobic002G213000 Sobic001G098600 Sobic001G098600 Sobic001G005300--Sobic001G098600 Sobic006G263300 Sobic006G263300 Sobic001G005300--Sobic006G263300 Sobic001G355600 Sobic001G355600 Sobic001G005300--Sobic001G355600 Sobic001G005300--Sobic002G201500 Sobic010G183032 Sobic010G183032 Sobic001G005300--Sobic010G183032
Octagon: transcription factors


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