Gene annotation
Transcriptome id Sobic.006G187800.1,Sobic.006G187800.2,Sobic.006G187800.3
Synonym Sb06g026150
Functional annotation expressed protein
UniProt C5YEG3 , A0A1B6PMQ4 , A0A1Z5REL7
Pfam PF03647
Panther DB PTHR12668 PTHR12668:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G33265 : Transmembrane proteins 14C
RAP-DB (Rice) LOC_Os04g48840.1 : expressed protein
MaizeGDB (Corn) Zm00025a010117
Brachypodium PNT61700 , KQJ84166
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G214700 fasciclin domain containing protein, expressed -
2 Sobic.002G051200 PHF5-like protein domain containing protein, expressed K12834: PHD finger-like domain-containing protein 5A
3 Sobic.006G013900 RNA polymerase subunit, putative, expressed K03008: RPB11, DNA-directed RNA polymerase II subunit RPB11
4 Sobic.006G183600 IQ calmodulin-binding motif family protein, putative, expressed -
5 Sobic.001G116600 inactive receptor kinase At2g26730 precursor, putative, expressed -
6 Sobic.006G133700 transcription factor RF2a, putative, expressed -
7 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
8 Sobic.003G382100 PHD finger protein, putative, expressed -
9 Sobic.002G179150 - -
10 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
11 Sobic.003G230000 serine/threonine-protein kinase, putative, expressed -
12 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
13 Sobic.001G300400 expansin precursor, putative, expressed -
14 Sobic.006G207400 expressed protein -
15 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
16 Sobic.006G218600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBK15 - F-box domain and kelch repeat containing protein, expressed -
17 Sobic.003G240100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.010G029000 expressed protein -
19 Sobic.003G146300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.006G160200 MSP domain containing protein, expressed -


Gene co-expression network
sample Sobic006G187800 Sobic006G187800 Sobic007G214700 Sobic007G214700 Sobic006G187800--Sobic007G214700 Sobic002G051200 Sobic002G051200 Sobic006G187800--Sobic002G051200 Sobic006G013900 Sobic006G013900 Sobic006G187800--Sobic006G013900 Sobic006G183600 Sobic006G183600 Sobic006G187800--Sobic006G183600 Sobic001G116600 Sobic001G116600 Sobic006G187800--Sobic001G116600 Sobic006G133700 Sobic006G133700 Sobic006G187800--Sobic006G133700 Sobic001G113800 Sobic001G113800 Sobic006G187800--Sobic001G113800 Sobic003G382100 Sobic003G382100 Sobic006G187800--Sobic003G382100 Sobic002G179150 Sobic002G179150 Sobic006G187800--Sobic002G179150 Sobic004G285900 Sobic004G285900 Sobic007G214700--Sobic004G285900 Sobic001G261549 Sobic001G261549 Sobic007G214700--Sobic001G261549 Sobic001G300400 Sobic001G300400 Sobic007G214700--Sobic001G300400 Sobic004G279601 Sobic004G279601 Sobic007G214700--Sobic004G279601 Sobic007G176800 Sobic007G176800 Sobic007G214700--Sobic007G176800 Sobic001G078600 Sobic001G078600 Sobic007G214700--Sobic001G078600 Sobic007G214700--Sobic002G179150 Sobic002G162300 Sobic002G162300 Sobic007G214700--Sobic002G162300 Sobic004G313200 Sobic004G313200 Sobic007G214700--Sobic004G313200 Sobic002G051200--Sobic006G013900 Sobic006G231700 Sobic006G231700 Sobic002G051200--Sobic006G231700 Sobic010G256200 Sobic010G256200 Sobic002G051200--Sobic010G256200 Sobic001G154400 Sobic001G154400 Sobic002G051200--Sobic001G154400 Sobic001G349400 Sobic001G349400 Sobic002G051200--Sobic001G349400 Sobic003G358300 Sobic003G358300 Sobic002G051200--Sobic003G358300 Sobic003G434000 Sobic003G434000 Sobic002G051200--Sobic003G434000 Sobic004G137900 Sobic004G137900 Sobic002G051200--Sobic004G137900 Sobic009G052500 Sobic009G052500 Sobic002G051200--Sobic009G052500 Sobic006G013900--Sobic006G231700 Sobic006G013900--Sobic002G051200 Sobic001G162800 Sobic001G162800 Sobic006G013900--Sobic001G162800 Sobic006G013900--Sobic004G137900 Sobic006G013900--Sobic001G154400 Sobic004G343600 Sobic004G343600 Sobic006G013900--Sobic004G343600 Sobic002G331300 Sobic002G331300 Sobic006G013900--Sobic002G331300 Sobic005G206700 Sobic005G206700 Sobic006G013900--Sobic005G206700 Sobic002G386300 Sobic002G386300 Sobic006G013900--Sobic002G386300 Sobic006G160200 Sobic006G160200 Sobic006G183600--Sobic006G160200 Sobic002G302600 Sobic002G302600 Sobic006G183600--Sobic002G302600 Sobic003G240100 Sobic003G240100 Sobic006G183600--Sobic003G240100 Sobic006G183600--Sobic001G300400 Sobic002G353200 Sobic002G353200 Sobic006G183600--Sobic002G353200 Sobic002G284100 Sobic002G284100 Sobic006G183600--Sobic002G284100 Sobic001G487200 Sobic001G487200 Sobic006G183600--Sobic001G487200 Sobic001G540700 Sobic001G540700 Sobic006G183600--Sobic001G540700 Sobic006G267800 Sobic006G267800 Sobic006G183600--Sobic006G267800 Sobic004G229200 Sobic004G229200 Sobic001G116600--Sobic004G229200 Sobic002G345800 Sobic002G345800 Sobic001G116600--Sobic002G345800 Sobic001G116600--Sobic002G284100 Sobic001G289900 Sobic001G289900 Sobic001G116600--Sobic001G289900 Sobic001G116600--Sobic006G160200 Sobic002G196500 Sobic002G196500 Sobic001G116600--Sobic002G196500 Sobic006G202100 Sobic006G202100 Sobic001G116600--Sobic006G202100 Sobic004G267600 Sobic004G267600 Sobic001G116600--Sobic004G267600 Sobic001G440900 Sobic001G440900 Sobic001G116600--Sobic001G440900 Sobic001G030400 Sobic001G030400 Sobic006G133700--Sobic001G030400 Sobic001G468500 Sobic001G468500 Sobic006G133700--Sobic001G468500 Sobic001G080200 Sobic001G080200 Sobic006G133700--Sobic001G080200 Sobic003G283600 Sobic003G283600 Sobic006G133700--Sobic003G283600 Sobic004G036800 Sobic004G036800 Sobic006G133700--Sobic004G036800 Sobic005G129700 Sobic005G129700 Sobic006G133700--Sobic005G129700 Sobic001G081100 Sobic001G081100 Sobic006G133700--Sobic001G081100 Sobic001G369800 Sobic001G369800 Sobic006G133700--Sobic001G369800 Sobic006G133700--Sobic002G284100 Sobic001G113800--Sobic001G487200 Sobic003G360700 Sobic003G360700 Sobic001G113800--Sobic003G360700 Sobic001G231200 Sobic001G231200 Sobic001G113800--Sobic001G231200 Sobic003G230000 Sobic003G230000 Sobic001G113800--Sobic003G230000 Sobic010G135300 Sobic010G135300 Sobic001G113800--Sobic010G135300 Sobic002G370400 Sobic002G370400 Sobic001G113800--Sobic002G370400 Sobic002G002100 Sobic002G002100 Sobic001G113800--Sobic002G002100 Sobic001G074000 Sobic001G074000 Sobic001G113800--Sobic001G074000 Sobic006G272500 Sobic006G272500 Sobic001G113800--Sobic006G272500 Sobic009G006900 Sobic009G006900 Sobic003G382100--Sobic009G006900 Sobic003G274400 Sobic003G274400 Sobic003G382100--Sobic003G274400 Sobic006G272800 Sobic006G272800 Sobic003G382100--Sobic006G272800 Sobic001G468000 Sobic001G468000 Sobic003G382100--Sobic001G468000 Sobic003G382100--Sobic002G196500 Sobic005G032600 Sobic005G032600 Sobic003G382100--Sobic005G032600 Sobic009G087700 Sobic009G087700 Sobic003G382100--Sobic009G087700 Sobic002G374200 Sobic002G374200 Sobic003G382100--Sobic002G374200 Sobic005G062600 Sobic005G062600 Sobic003G382100--Sobic005G062600 Sobic002G247800 Sobic002G247800 Sobic002G179150--Sobic002G247800 Sobic002G179150--Sobic007G214700 Sobic001G107200 Sobic001G107200 Sobic002G179150--Sobic001G107200 Sobic001G389300 Sobic001G389300 Sobic002G179150--Sobic001G389300 Sobic010G216600 Sobic010G216600 Sobic002G179150--Sobic010G216600 Sobic002G179150--Sobic001G030400 Sobic001G528600 Sobic001G528600 Sobic002G179150--Sobic001G528600 Sobic002G179150--Sobic002G353200 Sobic010G111200 Sobic010G111200 Sobic002G179150--Sobic010G111200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.