Gene annotation
Transcriptome id Sobic.006G183600.1
Synonym Sb06g025790, IQD22
Functional annotation IQ calmodulin-binding motif family protein, putative, expressed
UniProt C5YE38
Pfam PF00612 PF13178
Panther DB PTHR32295 PTHR32295:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G23060 : IQ-domain 22
RAP-DB (Rice) LOC_Os04g48160.1 : IQ calmodulin-binding motif family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056766 , Zm00025a010168
Brachypodium KQJ84110 , KQJ84111 , KQJ84109
Barley HORVU0Hr1G005320.9 , HORVU0Hr1G005320.2 , HORVU0Hr1G005320.6 , HORVU0Hr1G005320.10 , HORVU0Hr1G005320.11
Wheat TraesCS2D02G398300 , TraesCS2B02G418900
Populus -


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cDNA sequences
Sobic.006G183600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G160200 MSP domain containing protein, expressed -
2 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
3 Sobic.003G240100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G300400 expansin precursor, putative, expressed -
5 Sobic.002G353200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsBZR1(Ortholog in rice:Zhu et al. (2015))(PubMedID : 31659861)@BES1/BZR1 homolog protein, putative, expressed K14503: brassinosteroid resistant 1/2
6 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
7 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
8 Sobic.001G540700 expressed protein -
9 Sobic.006G267800 WD-40 repeat family protein, putative, expressed -
10 Sobic.001G369800 monocopper oxidase, putative, expressed -
11 Sobic.003G220500 TTL1, putative, expressed -
12 Sobic.005G021200 expressed protein -
13 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
14 Sobic.001G468000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF677 domain containing protein, putative, expressed -
15 Sobic.006G187800 expressed protein -
16 Sobic.006G133700 transcription factor RF2a, putative, expressed -
17 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
18 Sobic.004G205300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
19 Sobic.003G401900 CRP6 - Cysteine-rich family protein precursor, expressed -
20 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -


Gene co-expression network
sample Sobic006G183600 Sobic006G183600 Sobic006G160200 Sobic006G160200 Sobic006G183600--Sobic006G160200 Sobic002G302600 Sobic002G302600 Sobic006G183600--Sobic002G302600 Sobic003G240100 Sobic003G240100 Sobic006G183600--Sobic003G240100 Sobic001G300400 Sobic001G300400 Sobic006G183600--Sobic001G300400 Sobic002G353200 Sobic002G353200 Sobic006G183600--Sobic002G353200 Sobic002G284100 Sobic002G284100 Sobic006G183600--Sobic002G284100 Sobic001G487200 Sobic001G487200 Sobic006G183600--Sobic001G487200 Sobic001G540700 Sobic001G540700 Sobic006G183600--Sobic001G540700 Sobic006G267800 Sobic006G267800 Sobic006G183600--Sobic006G267800 Sobic006G160200--Sobic006G183600 Sobic006G160200--Sobic002G284100 Sobic004G267600 Sobic004G267600 Sobic006G160200--Sobic004G267600 Sobic005G062600 Sobic005G062600 Sobic006G160200--Sobic005G062600 Sobic006G160200--Sobic001G487200 Sobic009G172950 Sobic009G172950 Sobic006G160200--Sobic009G172950 Sobic001G369800 Sobic001G369800 Sobic006G160200--Sobic001G369800 Sobic006G160200--Sobic001G540700 Sobic006G272800 Sobic006G272800 Sobic006G160200--Sobic006G272800 Sobic002G302600--Sobic001G540700 Sobic004G207000 Sobic004G207000 Sobic002G302600--Sobic004G207000 Sobic002G302600--Sobic006G272800 Sobic001G468000 Sobic001G468000 Sobic002G302600--Sobic001G468000 Sobic002G302600--Sobic002G284100 Sobic006G126600 Sobic006G126600 Sobic002G302600--Sobic006G126600 Sobic009G006900 Sobic009G006900 Sobic002G302600--Sobic009G006900 Sobic009G031500 Sobic009G031500 Sobic002G302600--Sobic009G031500 Sobic007G197100 Sobic007G197100 Sobic002G302600--Sobic007G197100 Sobic002G253900 Sobic002G253900 Sobic003G240100--Sobic002G253900 Sobic002G006100 Sobic002G006100 Sobic003G240100--Sobic002G006100 Sobic001G382400 Sobic001G382400 Sobic003G240100--Sobic001G382400 Sobic003G217500 Sobic003G217500 Sobic003G240100--Sobic003G217500 Sobic001G123100 Sobic001G123100 Sobic003G240100--Sobic001G123100 Sobic003G240100--Sobic001G369800 Sobic008G026400 Sobic008G026400 Sobic003G240100--Sobic008G026400 Sobic009G254000 Sobic009G254000 Sobic003G240100--Sobic009G254000 Sobic004G145300 Sobic004G145300 Sobic003G240100--Sobic004G145300 Sobic002G351100 Sobic002G351100 Sobic001G300400--Sobic002G351100 Sobic001G289900 Sobic001G289900 Sobic001G300400--Sobic001G289900 Sobic006G236800 Sobic006G236800 Sobic001G300400--Sobic006G236800 Sobic003G297200 Sobic003G297200 Sobic001G300400--Sobic003G297200 Sobic004G047100 Sobic004G047100 Sobic001G300400--Sobic004G047100 Sobic002G289800 Sobic002G289800 Sobic001G300400--Sobic002G289800 Sobic002G426800 Sobic002G426800 Sobic001G300400--Sobic002G426800 Sobic003G102000 Sobic003G102000 Sobic001G300400--Sobic003G102000 Sobic001G091500 Sobic001G091500 Sobic001G300400--Sobic001G091500 Sobic010G222100 Sobic010G222100 Sobic002G353200--Sobic010G222100 Sobic002G353200--Sobic001G289900 Sobic007G132900 Sobic007G132900 Sobic002G353200--Sobic007G132900 Sobic002G353200--Sobic001G300400 Sobic004G331200 Sobic004G331200 Sobic002G353200--Sobic004G331200 Sobic002G353200--Sobic003G102000 Sobic002G353200--Sobic002G289800 Sobic001G030400 Sobic001G030400 Sobic002G353200--Sobic001G030400 Sobic003G410600 Sobic003G410600 Sobic002G353200--Sobic003G410600 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G027600 Sobic002G027600 Sobic002G284100--Sobic002G027600 Sobic002G284100--Sobic001G369800 Sobic002G284100--Sobic001G123100 Sobic002G284100--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic002G284100--Sobic010G086000 Sobic002G284100--Sobic009G172950 Sobic006G142500 Sobic006G142500 Sobic002G284100--Sobic006G142500 Sobic004G315700 Sobic004G315700 Sobic001G487200--Sobic004G315700 Sobic009G212100 Sobic009G212100 Sobic001G487200--Sobic009G212100 Sobic001G487200--Sobic001G369800 Sobic001G231200 Sobic001G231200 Sobic001G487200--Sobic001G231200 Sobic002G370400 Sobic002G370400 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G487200--Sobic001G540700 Sobic001G296800 Sobic001G296800 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic001G540700--Sobic002G284100 Sobic001G540700--Sobic007G197100 Sobic001G540700--Sobic004G207000 Sobic001G540700--Sobic004G267600 Sobic001G540700--Sobic004G315700 Sobic001G540700--Sobic006G272800 Sobic001G540700--Sobic001G487200 Sobic001G540700--Sobic001G369800 Sobic003G345000 Sobic003G345000 Sobic001G540700--Sobic003G345000 Sobic006G267800--Sobic007G084200 Sobic006G267800--Sobic001G369800 Sobic006G267800--Sobic002G351100 Sobic006G267800--Sobic002G284100 Sobic010G079100 Sobic010G079100 Sobic006G267800--Sobic010G079100 Sobic006G267800--Sobic003G226700 Sobic001G261549 Sobic001G261549 Sobic006G267800--Sobic001G261549 Sobic003G389100 Sobic003G389100 Sobic006G267800--Sobic003G389100 Sobic006G267800--Sobic001G487200
Octagon: transcription factors


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