Gene annotation
Transcriptome id Sobic.002G206750.1
Synonym -
Functional annotation -
UniProt C5XCY8 , C9DI41
Pfam PF08132
Panther DB PTHR35727 PTHR35727:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G15948 : conserved peptide upstream open reading frame 10
RAP-DB (Rice) LOC_Os04g42095.1 : S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed
MaizeGDB (Corn) Zm00025a047066
Brachypodium -
Barley HORVU5Hr1G064040.6 , HORVU5Hr1G064040.8
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G193100 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
2 Sobic.002G206700 -(PubMedID : 24813726)@CPuORF8 - conserved peptide uORF-containing transcript, expressed K01611: speD, S-adenosylmethionine decarboxylase
3 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
4 Sobic.010G250400 OsSub52 - Putative Subtilisin homologue, expressed -
5 Sobic.009G076100 - -
6 Sobic.007G125300 BRCA1 C Terminus domain containing protein, expressed -
7 Sobic.007G219100 phosphatidylinositol transfer, putative, expressed -
8 Sobic.004G053900 expressed protein -
9 Sobic.006G126800 expressed protein K10730: ATP-dependent DNA helicase Q4
10 Sobic.002G173400 expressed protein -
11 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
12 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
13 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
14 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
15 Sobic.001G109700 expressed protein K19001: HELLS, ATP-dependent DNA helicase
16 Sobic.002G052800 FAR1 family protein, expressed -
17 Sobic.008G046200 PHD-finger family protein, expressed -
18 Sobic.006G179200 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
19 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
20 Sobic.001G008300 expressed protein -


Gene co-expression network
sample Sobic002G206750 Sobic002G206750 Sobic006G193100 Sobic006G193100 Sobic002G206750--Sobic006G193100 Sobic002G206700 Sobic002G206700 Sobic002G206750--Sobic002G206700 Sobic003G315700 Sobic003G315700 Sobic002G206750--Sobic003G315700 Sobic010G250400 Sobic010G250400 Sobic002G206750--Sobic010G250400 Sobic009G076100 Sobic009G076100 Sobic002G206750--Sobic009G076100 Sobic007G125300 Sobic007G125300 Sobic002G206750--Sobic007G125300 Sobic007G219100 Sobic007G219100 Sobic002G206750--Sobic007G219100 Sobic004G053900 Sobic004G053900 Sobic002G206750--Sobic004G053900 Sobic006G126800 Sobic006G126800 Sobic002G206750--Sobic006G126800 Sobic003G031700 Sobic003G031700 Sobic006G193100--Sobic003G031700 Sobic001G008300 Sobic001G008300 Sobic006G193100--Sobic001G008300 Sobic009G202801 Sobic009G202801 Sobic006G193100--Sobic009G202801 Sobic006G193100--Sobic003G315700 Sobic004G328300 Sobic004G328300 Sobic006G193100--Sobic004G328300 Sobic008G148000 Sobic008G148000 Sobic006G193100--Sobic008G148000 Sobic002G319300 Sobic002G319300 Sobic006G193100--Sobic002G319300 Sobic009G136000 Sobic009G136000 Sobic006G193100--Sobic009G136000 Sobic002G204400 Sobic002G204400 Sobic006G193100--Sobic002G204400 Sobic002G206700--Sobic002G206750 Sobic002G268700 Sobic002G268700 Sobic002G206700--Sobic002G268700 Sobic002G206700--Sobic010G250400 Sobic010G252200 Sobic010G252200 Sobic002G206700--Sobic010G252200 Sobic009G167900 Sobic009G167900 Sobic002G206700--Sobic009G167900 Sobic009G109300 Sobic009G109300 Sobic002G206700--Sobic009G109300 Sobic001G377700 Sobic001G377700 Sobic002G206700--Sobic001G377700 Sobic003G289800 Sobic003G289800 Sobic002G206700--Sobic003G289800 Sobic002G206700--Sobic007G125300 Sobic003G315700--Sobic008G148000 Sobic003G315700--Sobic006G193100 Sobic004G306100 Sobic004G306100 Sobic003G315700--Sobic004G306100 Sobic002G290000 Sobic002G290000 Sobic003G315700--Sobic002G290000 Sobic003G315700--Sobic009G202801 Sobic003G315700--Sobic004G328300 Sobic003G409600 Sobic003G409600 Sobic003G315700--Sobic003G409600 Sobic002G113400 Sobic002G113400 Sobic003G315700--Sobic002G113400 Sobic009G052100 Sobic009G052100 Sobic003G315700--Sobic009G052100 Sobic009G188900 Sobic009G188900 Sobic010G250400--Sobic009G188900 Sobic005G153000 Sobic005G153000 Sobic010G250400--Sobic005G153000 Sobic002G021200 Sobic002G021200 Sobic010G250400--Sobic002G021200 Sobic003G147500 Sobic003G147500 Sobic010G250400--Sobic003G147500 Sobic002G168000 Sobic002G168000 Sobic010G250400--Sobic002G168000 Sobic009G207400 Sobic009G207400 Sobic010G250400--Sobic009G207400 Sobic007G187700 Sobic007G187700 Sobic010G250400--Sobic007G187700 Sobic001G054700 Sobic001G054700 Sobic010G250400--Sobic001G054700 Sobic001G532800 Sobic001G532800 Sobic010G250400--Sobic001G532800 Sobic009G076100--Sobic002G206750 Sobic009G076100--Sobic004G306100 Sobic009G076100--Sobic003G315700 Sobic002G271400 Sobic002G271400 Sobic009G076100--Sobic002G271400 Sobic010G103500 Sobic010G103500 Sobic009G076100--Sobic010G103500 Sobic009G076100--Sobic002G268700 Sobic001G082800 Sobic001G082800 Sobic009G076100--Sobic001G082800 Sobic009G076100--Sobic004G053900 Sobic010G269800 Sobic010G269800 Sobic009G076100--Sobic010G269800 Sobic007G125300--Sobic002G290000 Sobic005G110535 Sobic005G110535 Sobic007G125300--Sobic005G110535 Sobic007G125300--Sobic008G148000 Sobic007G125300--Sobic004G053900 Sobic001G109700 Sobic001G109700 Sobic007G125300--Sobic001G109700 Sobic007G125300--Sobic001G377700 Sobic007G125300--Sobic002G204400 Sobic003G118100 Sobic003G118100 Sobic007G125300--Sobic003G118100 Sobic007G125300--Sobic002G113400 Sobic007G219100--Sobic003G147500 Sobic003G292700 Sobic003G292700 Sobic007G219100--Sobic003G292700 Sobic007G219100--Sobic003G409600 Sobic009G224300 Sobic009G224300 Sobic007G219100--Sobic009G224300 Sobic001G407100 Sobic001G407100 Sobic007G219100--Sobic001G407100 Sobic009G225500 Sobic009G225500 Sobic007G219100--Sobic009G225500 Sobic006G255300 Sobic006G255300 Sobic007G219100--Sobic006G255300 Sobic007G219100--Sobic010G250400 Sobic006G016700 Sobic006G016700 Sobic007G219100--Sobic006G016700 Sobic004G053900--Sobic002G113400 Sobic002G297500 Sobic002G297500 Sobic004G053900--Sobic002G297500 Sobic004G053900--Sobic002G290000 Sobic004G053900--Sobic007G125300 Sobic004G053900--Sobic008G148000 Sobic004G053900--Sobic005G110535 Sobic010G051100 Sobic010G051100 Sobic004G053900--Sobic010G051100 Sobic006G179200 Sobic006G179200 Sobic004G053900--Sobic006G179200 Sobic004G053900--Sobic004G328300 Sobic009G081800 Sobic009G081800 Sobic006G126800--Sobic009G081800 Sobic006G126800--Sobic010G252200 Sobic006G126800--Sobic010G269800 Sobic002G426100 Sobic002G426100 Sobic006G126800--Sobic002G426100 Sobic006G127200 Sobic006G127200 Sobic006G126800--Sobic006G127200 Sobic002G173400 Sobic002G173400 Sobic006G126800--Sobic002G173400 Sobic002G095300 Sobic002G095300 Sobic006G126800--Sobic002G095300 Sobic002G286632 Sobic002G286632 Sobic006G126800--Sobic002G286632 Sobic005G210500 Sobic005G210500 Sobic006G126800--Sobic005G210500
Octagon: transcription factors


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