Gene annotation
Transcriptome id Sobic.002G212000.1,Sobic.002G212000.2
Synonym SbERF22, RAP2.2, Sb02g025530, ethylene response factor 22
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1B6QCP0
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF8
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G53910 : related to AP2 12
RAP-DB (Rice) LOC_Os09g26420.1,LOC_Os09g26420.2 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047123 , Zm00025a013959
Brachypodium KQJ90357
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G212000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBT6 - F-box and tubby domain containing protein, expressed -
2 Sobic.004G331800 alginate regulatory protein AlgP, putative, expressed -
3 Sobic.002G119800 arginyl-tRNA synthetase, putative, expressed -
4 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
5 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
6 Sobic.006G138500 wall-associated receptor kinase-like 20 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
7 Sobic.004G214100 "BC14(Ortholog in rice:Zhang et al., 2011)"(PubMedID : 31659885)@transporter family protein, putative, expressed K15281: solute carrier family 35
8 Sobic.001G285000 - -
9 Sobic.001G337500 expressed protein -
10 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
11 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
12 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.004G191700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@No apical meristem protein, putative, expressed -
14 Sobic.009G149200 - -
15 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
16 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.001G162100 WRKY94, expressed -
18 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
19 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
20 Sobic.007G181701 - -


Gene co-expression network
sample Sobic002G212000 Sobic002G212000 Sobic006G277200 Sobic006G277200 Sobic002G212000--Sobic006G277200 Sobic004G331800 Sobic004G331800 Sobic002G212000--Sobic004G331800 Sobic002G119800 Sobic002G119800 Sobic002G212000--Sobic002G119800 Sobic010G062800 Sobic010G062800 Sobic002G212000--Sobic010G062800 Sobic010G041700 Sobic010G041700 Sobic002G212000--Sobic010G041700 Sobic006G138500 Sobic006G138500 Sobic002G212000--Sobic006G138500 Sobic004G214100 Sobic004G214100 Sobic002G212000--Sobic004G214100 Sobic001G285000 Sobic001G285000 Sobic002G212000--Sobic001G285000 Sobic001G337500 Sobic001G337500 Sobic002G212000--Sobic001G337500 Sobic001G045000 Sobic001G045000 Sobic006G277200--Sobic001G045000 Sobic001G321500 Sobic001G321500 Sobic006G277200--Sobic001G321500 Sobic006G277200--Sobic004G214100 Sobic006G277200--Sobic001G285000 Sobic006G277200--Sobic002G119800 Sobic006G047000 Sobic006G047000 Sobic006G277200--Sobic006G047000 Sobic009G080200 Sobic009G080200 Sobic006G277200--Sobic009G080200 Sobic005G229400 Sobic005G229400 Sobic006G277200--Sobic005G229400 Sobic004G173500 Sobic004G173500 Sobic006G277200--Sobic004G173500 Sobic003G369500 Sobic003G369500 Sobic004G331800--Sobic003G369500 Sobic002G417500 Sobic002G417500 Sobic004G331800--Sobic002G417500 Sobic004G086800 Sobic004G086800 Sobic004G331800--Sobic004G086800 Sobic004G331800--Sobic001G285000 Sobic002G138700 Sobic002G138700 Sobic004G331800--Sobic002G138700 Sobic001G410100 Sobic001G410100 Sobic004G331800--Sobic001G410100 Sobic002G207300 Sobic002G207300 Sobic004G331800--Sobic002G207300 Sobic009G149200 Sobic009G149200 Sobic004G331800--Sobic009G149200 Sobic003G425200 Sobic003G425200 Sobic004G331800--Sobic003G425200 Sobic004G332000 Sobic004G332000 Sobic002G119800--Sobic004G332000 Sobic009G059700 Sobic009G059700 Sobic002G119800--Sobic009G059700 Sobic006G213601 Sobic006G213601 Sobic002G119800--Sobic006G213601 Sobic008G016900 Sobic008G016900 Sobic002G119800--Sobic008G016900 Sobic001G162100 Sobic001G162100 Sobic002G119800--Sobic001G162100 Sobic009G230700 Sobic009G230700 Sobic002G119800--Sobic009G230700 Sobic009G134600 Sobic009G134600 Sobic002G119800--Sobic009G134600 Sobic007G011000 Sobic007G011000 Sobic002G119800--Sobic007G011000 Sobic004G145200 Sobic004G145200 Sobic002G119800--Sobic004G145200 Sobic010G062800--Sobic008G016900 Sobic007G188100 Sobic007G188100 Sobic010G062800--Sobic007G188100 Sobic001G403700 Sobic001G403700 Sobic010G062800--Sobic001G403700 Sobic006G192500 Sobic006G192500 Sobic010G062800--Sobic006G192500 Sobic010G228000 Sobic010G228000 Sobic010G062800--Sobic010G228000 Sobic001G283500 Sobic001G283500 Sobic010G062800--Sobic001G283500 Sobic002G214900 Sobic002G214900 Sobic010G062800--Sobic002G214900 Sobic010G062800--Sobic004G145200 Sobic006G182100 Sobic006G182100 Sobic010G062800--Sobic006G182100 Sobic009G046600 Sobic009G046600 Sobic010G041700--Sobic009G046600 Sobic005G010200 Sobic005G010200 Sobic010G041700--Sobic005G010200 Sobic006G089300 Sobic006G089300 Sobic010G041700--Sobic006G089300 Sobic007G151100 Sobic007G151100 Sobic010G041700--Sobic007G151100 Sobic002G374100 Sobic002G374100 Sobic010G041700--Sobic002G374100 Sobic009G066800 Sobic009G066800 Sobic010G041700--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic010G041700--Sobic009G129000 Sobic001G483400 Sobic001G483400 Sobic010G041700--Sobic001G483400 Sobic002G272900 Sobic002G272900 Sobic010G041700--Sobic002G272900 Sobic006G044932 Sobic006G044932 Sobic006G138500--Sobic006G044932 Sobic003G277500 Sobic003G277500 Sobic006G138500--Sobic003G277500 Sobic006G138500--Sobic001G321500 Sobic003G296300 Sobic003G296300 Sobic006G138500--Sobic003G296300 Sobic006G138500--Sobic001G410100 Sobic003G352400 Sobic003G352400 Sobic006G138500--Sobic003G352400 Sobic001G287600 Sobic001G287600 Sobic006G138500--Sobic001G287600 Sobic006G138500--Sobic001G285000 Sobic010G052600 Sobic010G052600 Sobic006G138500--Sobic010G052600 Sobic001G022600 Sobic001G022600 Sobic004G214100--Sobic001G022600 Sobic004G227300 Sobic004G227300 Sobic004G214100--Sobic004G227300 Sobic009G190800 Sobic009G190800 Sobic004G214100--Sobic009G190800 Sobic001G261597 Sobic001G261597 Sobic004G214100--Sobic001G261597 Sobic003G359900 Sobic003G359900 Sobic004G214100--Sobic003G359900 Sobic006G269000 Sobic006G269000 Sobic004G214100--Sobic006G269000 Sobic007G168200 Sobic007G168200 Sobic004G214100--Sobic007G168200 Sobic001G427500 Sobic001G427500 Sobic004G214100--Sobic001G427500 Sobic010G009400 Sobic010G009400 Sobic004G214100--Sobic010G009400 Sobic009G156300 Sobic009G156300 Sobic001G285000--Sobic009G156300 Sobic004G352900 Sobic004G352900 Sobic001G285000--Sobic004G352900 Sobic010G066300 Sobic010G066300 Sobic001G285000--Sobic010G066300 Sobic001G285000--Sobic001G321500 Sobic001G285000--Sobic005G229400 Sobic002G117200 Sobic002G117200 Sobic001G285000--Sobic002G117200 Sobic001G285000--Sobic001G410100 Sobic001G285000--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G285000--Sobic001G530350 Sobic001G337500--Sobic006G047000 Sobic001G234300 Sobic001G234300 Sobic001G337500--Sobic001G234300 Sobic010G030401 Sobic010G030401 Sobic001G337500--Sobic010G030401 Sobic006G159300 Sobic006G159300 Sobic001G337500--Sobic006G159300 Sobic001G337500--Sobic010G041700 Sobic003G181600 Sobic003G181600 Sobic001G337500--Sobic003G181600 Sobic003G356700 Sobic003G356700 Sobic001G337500--Sobic003G356700 Sobic004G144500 Sobic004G144500 Sobic001G337500--Sobic004G144500 Sobic001G341300 Sobic001G341300 Sobic001G337500--Sobic001G341300
Octagon: transcription factors


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