Gene annotation
Transcriptome id Sobic.002G223800.1
Synonym Sb02g026455
Functional annotation hydroxyproline-rich glycoprotein family protein, putative, expressed
UniProt C5X294
Pfam -
Panther DB PTHR33826 PTHR33826:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56590 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os09g28110.1 : hydroxyproline-rich glycoprotein family protein, putative, expressed
MaizeGDB (Corn) Zm00025a014029
Brachypodium KQJ90500
Barley HORVU5Hr1G067930.4 , HORVU5Hr1G067930.1 , HORVU5Hr1G067930.2 , HORVU5Hr1G067930.3
Wheat TraesCS5A02G236400 , TraesCS5A02G236400 , TraesCS5B02G234700 , TraesCS5D02G243400 , TraesCS5B02G234700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G159000 phosphatidic acid phosphatase-related, putative, expressed -
2 Sobic.003G253400 expressed protein -
3 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
4 Sobic.003G062400 PHD finger protein, putative, expressed -
5 Sobic.004G358900 Sec1 family transport protein, putative, expressed -
6 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
7 Sobic.009G045200 double-stranded RNA binding motif containing protein, expressed -
8 Sobic.006G281700 DUF803 domain containing, putative, expressed -
9 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
10 Sobic.001G179200 expressed protein -
11 Sobic.010G232900 surp module family protein, putative, expressed -
12 Sobic.002G115500 PHD finger protein, putative, expressed -
13 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
14 Sobic.009G260650 - -
15 Sobic.004G277400 glucosyltransferase, putative, expressed K03849: alpha-1,3-glucosyltransferase
16 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
17 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
18 Sobic.002G231300 CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
19 Sobic.004G145600 expressed protein -
20 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G223800 Sobic002G223800 Sobic009G159000 Sobic009G159000 Sobic002G223800--Sobic009G159000 Sobic003G253400 Sobic003G253400 Sobic002G223800--Sobic003G253400 Sobic001G042200 Sobic001G042200 Sobic002G223800--Sobic001G042200 Sobic003G062400 Sobic003G062400 Sobic002G223800--Sobic003G062400 Sobic004G358900 Sobic004G358900 Sobic002G223800--Sobic004G358900 Sobic005G040900 Sobic005G040900 Sobic002G223800--Sobic005G040900 Sobic009G045200 Sobic009G045200 Sobic002G223800--Sobic009G045200 Sobic006G281700 Sobic006G281700 Sobic002G223800--Sobic006G281700 Sobic008G058800 Sobic008G058800 Sobic002G223800--Sobic008G058800 Sobic009G159000--Sobic002G223800 Sobic009G159000--Sobic008G058800 Sobic004G323700 Sobic004G323700 Sobic009G159000--Sobic004G323700 Sobic004G320100 Sobic004G320100 Sobic009G159000--Sobic004G320100 Sobic001G542450 Sobic001G542450 Sobic009G159000--Sobic001G542450 Sobic001G135500 Sobic001G135500 Sobic009G159000--Sobic001G135500 Sobic003G212900 Sobic003G212900 Sobic009G159000--Sobic003G212900 Sobic002G313900 Sobic002G313900 Sobic009G159000--Sobic002G313900 Sobic001G005600 Sobic001G005600 Sobic009G159000--Sobic001G005600 Sobic010G279900 Sobic010G279900 Sobic003G253400--Sobic010G279900 Sobic003G253400--Sobic003G062400 Sobic001G395100 Sobic001G395100 Sobic003G253400--Sobic001G395100 Sobic003G253400--Sobic005G040900 Sobic005G025800 Sobic005G025800 Sobic003G253400--Sobic005G025800 Sobic009G192500 Sobic009G192500 Sobic003G253400--Sobic009G192500 Sobic004G347100 Sobic004G347100 Sobic003G253400--Sobic004G347100 Sobic007G183300 Sobic007G183300 Sobic003G253400--Sobic007G183300 Sobic003G253400--Sobic008G058800 Sobic010G077500 Sobic010G077500 Sobic001G042200--Sobic010G077500 Sobic004G345400 Sobic004G345400 Sobic001G042200--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic001G042200--Sobic007G187600 Sobic001G042200--Sobic008G058800 Sobic007G056500 Sobic007G056500 Sobic001G042200--Sobic007G056500 Sobic001G042200--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic001G042200--Sobic007G042900 Sobic009G249700 Sobic009G249700 Sobic001G042200--Sobic009G249700 Sobic001G042200--Sobic006G281700 Sobic003G062400--Sobic003G253400 Sobic008G160500 Sobic008G160500 Sobic003G062400--Sobic008G160500 Sobic004G145600 Sobic004G145600 Sobic003G062400--Sobic004G145600 Sobic003G038600 Sobic003G038600 Sobic003G062400--Sobic003G038600 Sobic003G062400--Sobic001G005600 Sobic004G068500 Sobic004G068500 Sobic003G062400--Sobic004G068500 Sobic009G125000 Sobic009G125000 Sobic003G062400--Sobic009G125000 Sobic002G267400 Sobic002G267400 Sobic003G062400--Sobic002G267400 Sobic002G357900 Sobic002G357900 Sobic003G062400--Sobic002G357900 Sobic009G120500 Sobic009G120500 Sobic004G358900--Sobic009G120500 Sobic003G005900 Sobic003G005900 Sobic004G358900--Sobic003G005900 Sobic008G125000 Sobic008G125000 Sobic004G358900--Sobic008G125000 Sobic003G348200 Sobic003G348200 Sobic004G358900--Sobic003G348200 Sobic004G358900--Sobic003G062400 Sobic004G277400 Sobic004G277400 Sobic004G358900--Sobic004G277400 Sobic001G205900 Sobic001G205900 Sobic004G358900--Sobic001G205900 Sobic006G265600 Sobic006G265600 Sobic004G358900--Sobic006G265600 Sobic004G358900--Sobic002G223800 Sobic009G040800 Sobic009G040800 Sobic005G040900--Sobic009G040800 Sobic006G091000 Sobic006G091000 Sobic005G040900--Sobic006G091000 Sobic005G040900--Sobic004G347100 Sobic007G139400 Sobic007G139400 Sobic005G040900--Sobic007G139400 Sobic010G074900 Sobic010G074900 Sobic005G040900--Sobic010G074900 Sobic003G205501 Sobic003G205501 Sobic005G040900--Sobic003G205501 Sobic005G040900--Sobic004G345400 Sobic001G472100 Sobic001G472100 Sobic005G040900--Sobic001G472100 Sobic009G129600 Sobic009G129600 Sobic005G040900--Sobic009G129600 Sobic001G051700 Sobic001G051700 Sobic009G045200--Sobic001G051700 Sobic003G416700 Sobic003G416700 Sobic009G045200--Sobic003G416700 Sobic001G393700 Sobic001G393700 Sobic009G045200--Sobic001G393700 Sobic006G224800 Sobic006G224800 Sobic009G045200--Sobic006G224800 Sobic010G099800 Sobic010G099800 Sobic009G045200--Sobic010G099800 Sobic009G045200--Sobic007G187600 Sobic002G430300 Sobic002G430300 Sobic009G045200--Sobic002G430300 Sobic006G180700 Sobic006G180700 Sobic009G045200--Sobic006G180700 Sobic001G335900 Sobic001G335900 Sobic009G045200--Sobic001G335900 Sobic002G063900 Sobic002G063900 Sobic006G281700--Sobic002G063900 Sobic002G260400 Sobic002G260400 Sobic006G281700--Sobic002G260400 Sobic004G246100 Sobic004G246100 Sobic006G281700--Sobic004G246100 Sobic003G160000 Sobic003G160000 Sobic006G281700--Sobic003G160000 Sobic009G260650 Sobic009G260650 Sobic006G281700--Sobic009G260650 Sobic006G281700--Sobic001G042200 Sobic007G218000 Sobic007G218000 Sobic006G281700--Sobic007G218000 Sobic010G204400 Sobic010G204400 Sobic006G281700--Sobic010G204400 Sobic002G056701 Sobic002G056701 Sobic006G281700--Sobic002G056701 Sobic008G058800--Sobic001G042200 Sobic008G058800--Sobic009G129600 Sobic006G248500 Sobic006G248500 Sobic008G058800--Sobic006G248500 Sobic008G058800--Sobic003G205501 Sobic008G058800--Sobic010G077500 Sobic002G264200 Sobic002G264200 Sobic008G058800--Sobic002G264200 Sobic007G026000 Sobic007G026000 Sobic008G058800--Sobic007G026000 Sobic008G127400 Sobic008G127400 Sobic008G058800--Sobic008G127400 Sobic004G180900 Sobic004G180900 Sobic008G058800--Sobic004G180900
Octagon: transcription factors


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