Gene annotation
Transcriptome id Sobic.009G159000.1
Synonym Sb09g022190, AtIPCS1
Functional annotation phosphatidic acid phosphatase-related, putative, expressed
UniProt C5YZ61
Pfam PF14360
Panther DB PTHR21290 PTHR21290:SF29
NCBI CDD KOG3058; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54020 : Arabidopsis Inositol phosphorylceramide synthase 1
RAP-DB (Rice) LOC_Os05g37910.1 : phosphatidic acid phosphatase-related, putative, expressed
MaizeGDB (Corn) Zm00025a026844 , Zm00025a043875 , Zm00025a039644
Brachypodium PNT73200 , KQK10585 , KQK10584 , KQK05959 , KQK10583 , KQK10582
Barley HORVU3Hr1G085630.9 , HORVU3Hr1G085630.8 , HORVU3Hr1G085630.5 , HORVU3Hr1G085630.4 , HORVU3Hr1G085630.7 , HORVU3Hr1G085630.1 , HORVU3Hr1G085630.3 , HORVU3Hr1G085630.2 , HORVU3Hr1G085630.11 , HORVU3Hr1G085630.10 , HORVU3Hr1G085630.12
Wheat TraesCS1A02G280400 , TraesCS3D02G358200 , TraesCS3A02G365000 , TraesCS3B02G396900 , TraesCS3D02G358200 , TraesCS1B02G289300 , TraesCS1D02G279500
Populus PNS98949 , PNS98948 , PNS98950 , PNS98951 , PNT30691 , PNT30692


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cDNA sequences
Sobic.009G159000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G223800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
2 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
3 Sobic.004G323700 zinc finger family protein, putative, expressed -
4 Sobic.004G320100 expressed protein -
5 Sobic.001G542450 - -
6 Sobic.001G135500 HECT-domain domain containing protein, expressed K10588: ubiquitin-protein ligase E3 B
7 Sobic.003G212900 zinc ion binding protein, putative, expressed -
8 Sobic.002G313900 potassium transporter, putative, expressed -
9 Sobic.001G005600 CBS domain containing membrane protein, putative, expressed -
10 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
11 Sobic.002G245000 HECT-domain domain containing protein, expressed K10591: NEDD4, E3 ubiquitin-protein ligase NEDD4
12 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
13 Sobic.003G062400 PHD finger protein, putative, expressed -
14 Sobic.001G487100 RNA recognition motif containing protein, putative, expressed -
15 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
16 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -
17 Sobic.006G210700 potassium transporter, putative, expressed -
18 Sobic.006G049100 expressed protein -
19 Sobic.003G050900 dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative, expressed K03845: alpha-1,3-mannosyltransferase
20 Sobic.003G253400 expressed protein -


Gene co-expression network
sample Sobic009G159000 Sobic009G159000 Sobic002G223800 Sobic002G223800 Sobic009G159000--Sobic002G223800 Sobic008G058800 Sobic008G058800 Sobic009G159000--Sobic008G058800 Sobic004G323700 Sobic004G323700 Sobic009G159000--Sobic004G323700 Sobic004G320100 Sobic004G320100 Sobic009G159000--Sobic004G320100 Sobic001G542450 Sobic001G542450 Sobic009G159000--Sobic001G542450 Sobic001G135500 Sobic001G135500 Sobic009G159000--Sobic001G135500 Sobic003G212900 Sobic003G212900 Sobic009G159000--Sobic003G212900 Sobic002G313900 Sobic002G313900 Sobic009G159000--Sobic002G313900 Sobic001G005600 Sobic001G005600 Sobic009G159000--Sobic001G005600 Sobic002G223800--Sobic009G159000 Sobic003G253400 Sobic003G253400 Sobic002G223800--Sobic003G253400 Sobic001G042200 Sobic001G042200 Sobic002G223800--Sobic001G042200 Sobic003G062400 Sobic003G062400 Sobic002G223800--Sobic003G062400 Sobic004G358900 Sobic004G358900 Sobic002G223800--Sobic004G358900 Sobic005G040900 Sobic005G040900 Sobic002G223800--Sobic005G040900 Sobic009G045200 Sobic009G045200 Sobic002G223800--Sobic009G045200 Sobic006G281700 Sobic006G281700 Sobic002G223800--Sobic006G281700 Sobic002G223800--Sobic008G058800 Sobic008G058800--Sobic001G042200 Sobic009G129600 Sobic009G129600 Sobic008G058800--Sobic009G129600 Sobic006G248500 Sobic006G248500 Sobic008G058800--Sobic006G248500 Sobic003G205501 Sobic003G205501 Sobic008G058800--Sobic003G205501 Sobic010G077500 Sobic010G077500 Sobic008G058800--Sobic010G077500 Sobic002G264200 Sobic002G264200 Sobic008G058800--Sobic002G264200 Sobic007G026000 Sobic007G026000 Sobic008G058800--Sobic007G026000 Sobic008G127400 Sobic008G127400 Sobic008G058800--Sobic008G127400 Sobic004G180900 Sobic004G180900 Sobic008G058800--Sobic004G180900 Sobic002G117400 Sobic002G117400 Sobic004G323700--Sobic002G117400 Sobic007G218000 Sobic007G218000 Sobic004G323700--Sobic007G218000 Sobic002G303600 Sobic002G303600 Sobic004G323700--Sobic002G303600 Sobic010G261600 Sobic010G261600 Sobic004G323700--Sobic010G261600 Sobic004G228800 Sobic004G228800 Sobic004G323700--Sobic004G228800 Sobic010G278200 Sobic010G278200 Sobic004G323700--Sobic010G278200 Sobic006G174850 Sobic006G174850 Sobic004G323700--Sobic006G174850 Sobic006G131000 Sobic006G131000 Sobic004G323700--Sobic006G131000 Sobic004G039600 Sobic004G039600 Sobic004G323700--Sobic004G039600 Sobic001G487100 Sobic001G487100 Sobic004G320100--Sobic001G487100 Sobic010G154000 Sobic010G154000 Sobic004G320100--Sobic010G154000 Sobic003G132000 Sobic003G132000 Sobic004G320100--Sobic003G132000 Sobic006G049100 Sobic006G049100 Sobic004G320100--Sobic006G049100 Sobic003G128300 Sobic003G128300 Sobic004G320100--Sobic003G128300 Sobic006G008800 Sobic006G008800 Sobic004G320100--Sobic006G008800 Sobic006G270600 Sobic006G270600 Sobic004G320100--Sobic006G270600 Sobic004G320100--Sobic003G212900 Sobic003G121300 Sobic003G121300 Sobic004G320100--Sobic003G121300 Sobic008G002300 Sobic008G002300 Sobic001G542450--Sobic008G002300 Sobic003G416700 Sobic003G416700 Sobic001G542450--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G542450--Sobic002G145800 Sobic003G217200 Sobic003G217200 Sobic001G542450--Sobic003G217200 Sobic003G062300 Sobic003G062300 Sobic001G542450--Sobic003G062300 Sobic006G224800 Sobic006G224800 Sobic001G542450--Sobic006G224800 Sobic002G295500 Sobic002G295500 Sobic001G542450--Sobic002G295500 Sobic001G461400 Sobic001G461400 Sobic001G542450--Sobic001G461400 Sobic006G166200 Sobic006G166200 Sobic001G542450--Sobic006G166200 Sobic001G135500--Sobic003G212900 Sobic001G135500--Sobic010G077500 Sobic002G245000 Sobic002G245000 Sobic001G135500--Sobic002G245000 Sobic007G187600 Sobic007G187600 Sobic001G135500--Sobic007G187600 Sobic002G390400 Sobic002G390400 Sobic001G135500--Sobic002G390400 Sobic008G021000 Sobic008G021000 Sobic001G135500--Sobic008G021000 Sobic001G135500--Sobic009G045200 Sobic001G135500--Sobic001G005600 Sobic001G034500 Sobic001G034500 Sobic001G135500--Sobic001G034500 Sobic003G212900--Sobic001G135500 Sobic003G212900--Sobic010G077500 Sobic002G422100 Sobic002G422100 Sobic003G212900--Sobic002G422100 Sobic003G212900--Sobic003G416700 Sobic003G212900--Sobic001G042200 Sobic004G309900 Sobic004G309900 Sobic003G212900--Sobic004G309900 Sobic003G212900--Sobic006G224800 Sobic003G212900--Sobic008G058800 Sobic003G212900--Sobic002G295500 Sobic009G166600 Sobic009G166600 Sobic002G313900--Sobic009G166600 Sobic009G208100 Sobic009G208100 Sobic002G313900--Sobic009G208100 Sobic006G139100 Sobic006G139100 Sobic002G313900--Sobic006G139100 Sobic002G292900 Sobic002G292900 Sobic002G313900--Sobic002G292900 Sobic006G210700 Sobic006G210700 Sobic002G313900--Sobic006G210700 Sobic002G313900--Sobic008G021000 Sobic009G249700 Sobic009G249700 Sobic002G313900--Sobic009G249700 Sobic001G478800 Sobic001G478800 Sobic002G313900--Sobic001G478800 Sobic002G313900--Sobic003G212900 Sobic009G160600 Sobic009G160600 Sobic001G005600--Sobic009G160600 Sobic010G129600 Sobic010G129600 Sobic001G005600--Sobic010G129600 Sobic007G042900 Sobic007G042900 Sobic001G005600--Sobic007G042900 Sobic008G140400 Sobic008G140400 Sobic001G005600--Sobic008G140400 Sobic003G150900 Sobic003G150900 Sobic001G005600--Sobic003G150900 Sobic001G005600--Sobic004G323700 Sobic004G068500 Sobic004G068500 Sobic001G005600--Sobic004G068500 Sobic001G005600--Sobic008G021000 Sobic001G161900 Sobic001G161900 Sobic001G005600--Sobic001G161900
Octagon: transcription factors


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