Gene annotation
Transcriptome id Sobic.002G238300.1,Sobic.002G238300.2,Sobic.002G238300.3
Synonym ATCSLE1, Sb02g027610, CSLE1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
CSLE6 - cellulose synthase-like family E, expressed
UniProt C5X361 , A0A1W0W5N9 , A0A1W0W5L8
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF67
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G55850 : cellulose synthase like E1
RAP-DB (Rice) LOC_Os09g30130.1 : CSLE6 - cellulose synthase-like family E, expressed
MaizeGDB (Corn) Zm00025a047380
Brachypodium -
Barley -
Wheat TraesCS5A02G253200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
2 Sobic.005G134600 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
3 Sobic.003G445000 pectinacetylesterase domain containing protein, expressed -
4 Sobic.007G106500 "C3 PTPC, unknown so far"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
5 Sobic.004G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
6 Sobic.007G120000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
7 Sobic.001G131001 - -
8 Sobic.003G287450 - -
9 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
10 Sobic.007G172500 zinc finger family protein, putative, expressed -
11 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
12 Sobic.010G220300 glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed -
13 Sobic.004G126500 - -
14 Sobic.009G221200 NBS-LRR disease resistance protein, putative, expressed -
15 Sobic.002G238700 - -
16 Sobic.006G009700 expressed protein -
17 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
18 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
19 Sobic.003G287400 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
20 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G238300 Sobic002G238300 Sobic001G067800 Sobic001G067800 Sobic002G238300--Sobic001G067800 Sobic005G134600 Sobic005G134600 Sobic002G238300--Sobic005G134600 Sobic003G445000 Sobic003G445000 Sobic002G238300--Sobic003G445000 Sobic007G106500 Sobic007G106500 Sobic002G238300--Sobic007G106500 Sobic004G161200 Sobic004G161200 Sobic002G238300--Sobic004G161200 Sobic007G120000 Sobic007G120000 Sobic002G238300--Sobic007G120000 Sobic001G131001 Sobic001G131001 Sobic002G238300--Sobic001G131001 Sobic003G287450 Sobic003G287450 Sobic002G238300--Sobic003G287450 Sobic004G161900 Sobic004G161900 Sobic002G238300--Sobic004G161900 Sobic005G219600 Sobic005G219600 Sobic001G067800--Sobic005G219600 Sobic001G218500 Sobic001G218500 Sobic001G067800--Sobic001G218500 Sobic003G255600 Sobic003G255600 Sobic001G067800--Sobic003G255600 Sobic001G239200 Sobic001G239200 Sobic001G067800--Sobic001G239200 Sobic004G193500 Sobic004G193500 Sobic001G067800--Sobic004G193500 Sobic009G079900 Sobic009G079900 Sobic001G067800--Sobic009G079900 Sobic003G079100 Sobic003G079100 Sobic001G067800--Sobic003G079100 Sobic002G029600 Sobic002G029600 Sobic001G067800--Sobic002G029600 Sobic003G020500 Sobic003G020500 Sobic001G067800--Sobic003G020500 Sobic003G017601 Sobic003G017601 Sobic005G134600--Sobic003G017601 Sobic005G134600--Sobic001G067800 Sobic005G134600--Sobic004G161900 Sobic005G134600--Sobic001G218500 Sobic005G134600--Sobic003G287450 Sobic005G134600--Sobic007G120000 Sobic004G106300 Sobic004G106300 Sobic005G134600--Sobic004G106300 Sobic003G287400 Sobic003G287400 Sobic005G134600--Sobic003G287400 Sobic006G230300 Sobic006G230300 Sobic005G134600--Sobic006G230300 Sobic003G445000--Sobic002G238300 Sobic001G242800 Sobic001G242800 Sobic003G445000--Sobic001G242800 Sobic010G178600 Sobic010G178600 Sobic003G445000--Sobic010G178600 Sobic006G135000 Sobic006G135000 Sobic003G445000--Sobic006G135000 Sobic009G081500 Sobic009G081500 Sobic003G445000--Sobic009G081500 Sobic009G105900 Sobic009G105900 Sobic003G445000--Sobic009G105900 Sobic002G009300 Sobic002G009300 Sobic003G445000--Sobic002G009300 Sobic003G279800 Sobic003G279800 Sobic003G445000--Sobic003G279800 Sobic007G092600 Sobic007G092600 Sobic003G445000--Sobic007G092600 Sobic007G038600 Sobic007G038600 Sobic007G106500--Sobic007G038600 Sobic001G173700 Sobic001G173700 Sobic007G106500--Sobic001G173700 Sobic001G238500 Sobic001G238500 Sobic007G106500--Sobic001G238500 Sobic004G126500 Sobic004G126500 Sobic007G106500--Sobic004G126500 Sobic007G106500--Sobic001G131001 Sobic005G104200 Sobic005G104200 Sobic007G106500--Sobic005G104200 Sobic007G172500 Sobic007G172500 Sobic007G106500--Sobic007G172500 Sobic007G020700 Sobic007G020700 Sobic007G106500--Sobic007G020700 Sobic001G464300 Sobic001G464300 Sobic007G106500--Sobic001G464300 Sobic004G161200--Sobic007G038600 Sobic004G156250 Sobic004G156250 Sobic004G161200--Sobic004G156250 Sobic004G161200--Sobic002G238300 Sobic004G108800 Sobic004G108800 Sobic004G161200--Sobic004G108800 Sobic007G038500 Sobic007G038500 Sobic004G161200--Sobic007G038500 Sobic004G161200--Sobic001G131001 Sobic009G015166 Sobic009G015166 Sobic004G161200--Sobic009G015166 Sobic007G156800 Sobic007G156800 Sobic004G161200--Sobic007G156800 Sobic004G161200--Sobic007G106500 Sobic007G120000--Sobic001G218500 Sobic007G120000--Sobic003G020500 Sobic001G326400 Sobic001G326400 Sobic007G120000--Sobic001G326400 Sobic009G084300 Sobic009G084300 Sobic007G120000--Sobic009G084300 Sobic005G075600 Sobic005G075600 Sobic007G120000--Sobic005G075600 Sobic003G106300 Sobic003G106300 Sobic007G120000--Sobic003G106300 Sobic007G120000--Sobic003G017601 Sobic007G120000--Sobic001G067800 Sobic007G120000--Sobic005G134600 Sobic001G131001--Sobic004G156250 Sobic001G131001--Sobic005G104200 Sobic001G131001--Sobic001G238500 Sobic001G348800 Sobic001G348800 Sobic001G131001--Sobic001G348800 Sobic008G133000 Sobic008G133000 Sobic001G131001--Sobic008G133000 Sobic001G131001--Sobic004G126500 Sobic001G131001--Sobic001G464300 Sobic005G115300 Sobic005G115300 Sobic001G131001--Sobic005G115300 Sobic006G117500 Sobic006G117500 Sobic001G131001--Sobic006G117500 Sobic002G259100 Sobic002G259100 Sobic003G287450--Sobic002G259100 Sobic001G503000 Sobic001G503000 Sobic003G287450--Sobic001G503000 Sobic003G287450--Sobic005G115300 Sobic004G312200 Sobic004G312200 Sobic003G287450--Sobic004G312200 Sobic006G009700 Sobic006G009700 Sobic003G287450--Sobic006G009700 Sobic005G071900 Sobic005G071900 Sobic003G287450--Sobic005G071900 Sobic003G287450--Sobic001G218500 Sobic004G312500 Sobic004G312500 Sobic003G287450--Sobic004G312500 Sobic003G287450--Sobic003G287400 Sobic003G368000 Sobic003G368000 Sobic004G161900--Sobic003G368000 Sobic004G161900--Sobic003G017601 Sobic010G045400 Sobic010G045400 Sobic004G161900--Sobic010G045400 Sobic008G037900 Sobic008G037900 Sobic004G161900--Sobic008G037900 Sobic001G460400 Sobic001G460400 Sobic004G161900--Sobic001G460400 Sobic004G161900--Sobic001G218500 Sobic004G161900--Sobic003G079100 Sobic002G383900 Sobic002G383900 Sobic004G161900--Sobic002G383900 Sobic004G161900--Sobic003G020500
Octagon: transcription factors


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