Gene annotation
Transcriptome id Sobic.002G242900.1
Synonym Sb02g027990
Functional annotation aspartic proteinase nepenthesin-2 precursor, putative, expressed
UniProt C5X3T3
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF378
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G10770 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os09g30414.1 : aspartic proteinase nepenthesin-2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a047404
Brachypodium -
Barley HORVU5Hr1G072370.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.002G220000 expressed protein -
3 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
4 Sobic.004G246600 expressed protein -
5 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.002G358300 expressed protein -
7 Sobic.004G308900 AP2 domain containing protein, expressed -
8 Sobic.009G241801 - -
9 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
10 Sobic.006G187900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
11 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
12 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
13 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.005G037000 cytochrome P450, putative, expressed -
15 Sobic.003G230100 expressed protein -
16 Sobic.009G205500 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.004G097100 F-box family protein, putative, expressed -
18 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
19 Sobic.005G013500 WRKY52, expressed -
20 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic002G242900 Sobic002G242900 Sobic003G093000 Sobic003G093000 Sobic002G242900--Sobic003G093000 Sobic002G220000 Sobic002G220000 Sobic002G242900--Sobic002G220000 Sobic001G035100 Sobic001G035100 Sobic002G242900--Sobic001G035100 Sobic004G246600 Sobic004G246600 Sobic002G242900--Sobic004G246600 Sobic009G032000 Sobic009G032000 Sobic002G242900--Sobic009G032000 Sobic002G358300 Sobic002G358300 Sobic002G242900--Sobic002G358300 Sobic004G308900 Sobic004G308900 Sobic002G242900--Sobic004G308900 Sobic009G241801 Sobic009G241801 Sobic002G242900--Sobic009G241801 Sobic007G148500 Sobic007G148500 Sobic002G242900--Sobic007G148500 Sobic003G093000--Sobic002G220000 Sobic003G092900 Sobic003G092900 Sobic003G093000--Sobic003G092900 Sobic002G189100 Sobic002G189100 Sobic003G093000--Sobic002G189100 Sobic004G222500 Sobic004G222500 Sobic003G093000--Sobic004G222500 Sobic003G428700 Sobic003G428700 Sobic003G093000--Sobic003G428700 Sobic004G191400 Sobic004G191400 Sobic003G093000--Sobic004G191400 Sobic003G228900 Sobic003G228900 Sobic003G093000--Sobic003G228900 Sobic009G122400 Sobic009G122400 Sobic003G093000--Sobic009G122400 Sobic010G259300 Sobic010G259300 Sobic003G093000--Sobic010G259300 Sobic002G220000--Sobic003G093000 Sobic002G220000--Sobic001G035100 Sobic001G330400 Sobic001G330400 Sobic002G220000--Sobic001G330400 Sobic002G220000--Sobic003G428700 Sobic002G220000--Sobic003G092900 Sobic002G220000--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic002G220000--Sobic004G169200 Sobic002G220000--Sobic002G189100 Sobic004G219800 Sobic004G219800 Sobic002G220000--Sobic004G219800 Sobic001G035100--Sobic002G220000 Sobic001G035100--Sobic003G093000 Sobic001G035100--Sobic003G428700 Sobic001G035100--Sobic004G219800 Sobic001G035100--Sobic004G169200 Sobic004G097100 Sobic004G097100 Sobic001G035100--Sobic004G097100 Sobic001G035100--Sobic004G222500 Sobic001G035100--Sobic009G241801 Sobic001G471200 Sobic001G471200 Sobic001G035100--Sobic001G471200 Sobic004G229500 Sobic004G229500 Sobic004G246600--Sobic004G229500 Sobic004G246600--Sobic009G032000 Sobic004G246600--Sobic004G308900 Sobic005G013500 Sobic005G013500 Sobic004G246600--Sobic005G013500 Sobic004G246600--Sobic002G358300 Sobic004G246600--Sobic004G097100 Sobic001G143100 Sobic001G143100 Sobic004G246600--Sobic001G143100 Sobic002G269100 Sobic002G269100 Sobic004G246600--Sobic002G269100 Sobic002G184300 Sobic002G184300 Sobic004G246600--Sobic002G184300 Sobic001G256700 Sobic001G256700 Sobic009G032000--Sobic001G256700 Sobic002G388900 Sobic002G388900 Sobic009G032000--Sobic002G388900 Sobic009G032000--Sobic004G219800 Sobic009G032000--Sobic002G358300 Sobic009G032000--Sobic004G308900 Sobic009G032000--Sobic004G246600 Sobic001G330100 Sobic001G330100 Sobic009G032000--Sobic001G330100 Sobic009G032000--Sobic005G013500 Sobic002G395300 Sobic002G395300 Sobic009G032000--Sobic002G395300 Sobic002G358300--Sobic004G308900 Sobic007G122800 Sobic007G122800 Sobic002G358300--Sobic007G122800 Sobic001G195200 Sobic001G195200 Sobic002G358300--Sobic001G195200 Sobic002G358300--Sobic009G032000 Sobic002G358300--Sobic004G191400 Sobic002G358300--Sobic004G169200 Sobic004G191300 Sobic004G191300 Sobic002G358300--Sobic004G191300 Sobic002G358300--Sobic002G395300 Sobic004G294400 Sobic004G294400 Sobic002G358300--Sobic004G294400 Sobic004G308900--Sobic002G358300 Sobic004G308900--Sobic007G122800 Sobic004G308900--Sobic001G195200 Sobic004G308900--Sobic001G256700 Sobic004G308900--Sobic004G191400 Sobic004G308900--Sobic009G032000 Sobic004G308900--Sobic004G246600 Sobic004G308900--Sobic002G388900 Sobic004G308900--Sobic004G191300 Sobic009G241801--Sobic002G388900 Sobic009G241801--Sobic001G330100 Sobic008G187001 Sobic008G187001 Sobic009G241801--Sobic008G187001 Sobic009G241801--Sobic004G097100 Sobic009G144700 Sobic009G144700 Sobic009G241801--Sobic009G144700 Sobic009G241801--Sobic001G256700 Sobic009G241801--Sobic004G219800 Sobic009G241801--Sobic009G032000 Sobic009G241801--Sobic004G308900 Sobic007G148500--Sobic004G246600 Sobic001G311900 Sobic001G311900 Sobic007G148500--Sobic001G311900 Sobic007G148500--Sobic001G143100 Sobic007G148500--Sobic004G229500 Sobic007G148500--Sobic005G013500 Sobic009G205500 Sobic009G205500 Sobic007G148500--Sobic009G205500 Sobic007G148500--Sobic007G122800 Sobic007G148500--Sobic002G269100 Sobic007G148500--Sobic002G184300
Octagon: transcription factors


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