Gene annotation
Transcriptome id Sobic.002G262400.1
Synonym Sb02g029720
Functional annotation solute carrier family 35 member F1, putative, expressed
UniProt C5X5C9
Pfam PF06027
Panther DB PTHR14233 PTHR14233:SF14
NCBI CDD KOG2766; Predicted membrane protein
KEGG Orthology K15287; solute carrier family 35, member F1/2
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT3G59340 : Eukaryotic protein of unknown function (DUF914)
RAP-DB (Rice) LOC_Os08g42720.1 : solute carrier family 35 member F1, putative, expressed
MaizeGDB (Corn) Zm00025a014334
Brachypodium KQJ99201
Barley HORVU5Hr1G078320.11 , HORVU5Hr1G078320.10 , HORVU5Hr1G078320.9 , HORVU5Hr1G078320.5 , HORVU5Hr1G078320.4 , HORVU5Hr1G078320.7 , HORVU5Hr1G078320.6 , HORVU5Hr1G078320.1 , HORVU5Hr1G078320.3 , HORVU5Hr1G078320.2 , HORVU5Hr1G078320.8 , HORVU7Hr1G055900.4 , HORVU7Hr1G055900.5 , HORVU7Hr1G055900.10 , HORVU7Hr1G055900.11 , HORVU7Hr1G055900.2 , HORVU7Hr1G055900.3 , HORVU7Hr1G055900.1 , HORVU7Hr1G055900.6 , HORVU7Hr1G055900.7 , HORVU7Hr1G055900.8 , HORVU7Hr1G055900.9
Wheat TraesCS5B02G296500 , TraesCS5B02G296500 , TraesCS7D02G267100 , TraesCS7D02G267100 , TraesCS5D02G304300 , TraesCS5D02G304300 , TraesCS7A02G267800 , TraesCS5A02G297200 , TraesCS5A02G297200 , TraesCS7B02G164400
Populus PNT05016 , PNT05017


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cDNA sequences
Sobic.002G262400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G181700 expressed protein -
2 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
3 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
4 Sobic.007G098200 - -
5 Sobic.003G344900 selT-like protein precursor, putative, expressed -
6 Sobic.003G370900 expressed protein -
7 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
8 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
9 Sobic.003G063000 expressed protein -
10 Sobic.007G177000 OsAPx4 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8,9, expressed K00434: L-ascorbate peroxidase
11 Sobic.007G224500 expressed protein -
12 Sobic.004G235000 methyltransferase, putative, expressed K10770: ALKBH8, alkylated DNA repair protein alkB homolog 8
13 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
14 Sobic.007G062600 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
15 Sobic.001G473300 stage II sporulation protein E, putative, expressed -
16 Sobic.003G001100 Lg106, putative, expressed -
17 Sobic.002G010300 photoperiodic flowering time gene(PubMedID : 22394582)@casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
18 Sobic.002G226900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
19 Sobic.004G353200 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
20 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase


Gene co-expression network
sample Sobic002G262400 Sobic002G262400 Sobic001G181700 Sobic001G181700 Sobic002G262400--Sobic001G181700 Sobic004G348300 Sobic004G348300 Sobic002G262400--Sobic004G348300 Sobic003G012200 Sobic003G012200 Sobic002G262400--Sobic003G012200 Sobic007G098200 Sobic007G098200 Sobic002G262400--Sobic007G098200 Sobic003G344900 Sobic003G344900 Sobic002G262400--Sobic003G344900 Sobic003G370900 Sobic003G370900 Sobic002G262400--Sobic003G370900 Sobic001G199100 Sobic001G199100 Sobic002G262400--Sobic001G199100 Sobic009G075800 Sobic009G075800 Sobic002G262400--Sobic009G075800 Sobic003G063000 Sobic003G063000 Sobic002G262400--Sobic003G063000 Sobic009G222500 Sobic009G222500 Sobic001G181700--Sobic009G222500 Sobic001G181700--Sobic003G370900 Sobic001G080700 Sobic001G080700 Sobic001G181700--Sobic001G080700 Sobic009G165800 Sobic009G165800 Sobic001G181700--Sobic009G165800 Sobic001G181700--Sobic003G012200 Sobic001G181700--Sobic003G344900 Sobic002G110700 Sobic002G110700 Sobic001G181700--Sobic002G110700 Sobic001G181700--Sobic004G348300 Sobic002G352600 Sobic002G352600 Sobic001G181700--Sobic002G352600 Sobic004G348300--Sobic003G012200 Sobic004G348300--Sobic003G344900 Sobic004G348300--Sobic001G199100 Sobic004G348300--Sobic002G352600 Sobic006G249700 Sobic006G249700 Sobic004G348300--Sobic006G249700 Sobic004G006200 Sobic004G006200 Sobic004G348300--Sobic004G006200 Sobic002G059300 Sobic002G059300 Sobic004G348300--Sobic002G059300 Sobic009G217100 Sobic009G217100 Sobic004G348300--Sobic009G217100 Sobic005G004200 Sobic005G004200 Sobic004G348300--Sobic005G004200 Sobic003G012200--Sobic001G199100 Sobic003G012200--Sobic003G344900 Sobic010G000900 Sobic010G000900 Sobic003G012200--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G012200--Sobic001G085100 Sobic003G012200--Sobic004G348300 Sobic003G012200--Sobic009G075800 Sobic004G275700 Sobic004G275700 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic001G047400 Sobic001G047400 Sobic003G012200--Sobic001G047400 Sobic008G156700 Sobic008G156700 Sobic007G098200--Sobic008G156700 Sobic007G098200--Sobic001G199100 Sobic002G226900 Sobic002G226900 Sobic007G098200--Sobic002G226900 Sobic007G098200--Sobic003G012200 Sobic007G098200--Sobic009G075800 Sobic007G098200--Sobic001G047400 Sobic004G212200 Sobic004G212200 Sobic007G098200--Sobic004G212200 Sobic002G393500 Sobic002G393500 Sobic007G098200--Sobic002G393500 Sobic007G098200--Sobic004G275700 Sobic003G344900--Sobic003G012200 Sobic003G344900--Sobic010G000900 Sobic003G344900--Sobic004G348300 Sobic003G344900--Sobic009G259400 Sobic005G044800 Sobic005G044800 Sobic003G344900--Sobic005G044800 Sobic001G123000 Sobic001G123000 Sobic003G344900--Sobic001G123000 Sobic003G344900--Sobic001G047400 Sobic003G344900--Sobic001G181700 Sobic001G051200 Sobic001G051200 Sobic003G344900--Sobic001G051200 Sobic001G106700 Sobic001G106700 Sobic003G370900--Sobic001G106700 Sobic001G473300 Sobic001G473300 Sobic003G370900--Sobic001G473300 Sobic003G117900 Sobic003G117900 Sobic003G370900--Sobic003G117900 Sobic003G370900--Sobic001G181700 Sobic001G460600 Sobic001G460600 Sobic003G370900--Sobic001G460600 Sobic007G058700 Sobic007G058700 Sobic003G370900--Sobic007G058700 Sobic004G235000 Sobic004G235000 Sobic003G370900--Sobic004G235000 Sobic001G007200 Sobic001G007200 Sobic003G370900--Sobic001G007200 Sobic003G370900--Sobic009G165800 Sobic001G199100--Sobic003G012200 Sobic001G199100--Sobic004G275700 Sobic001G199100--Sobic009G075800 Sobic009G207000 Sobic009G207000 Sobic001G199100--Sobic009G207000 Sobic008G093000 Sobic008G093000 Sobic001G199100--Sobic008G093000 Sobic001G091300 Sobic001G091300 Sobic001G199100--Sobic001G091300 Sobic001G199100--Sobic002G226900 Sobic004G206700 Sobic004G206700 Sobic001G199100--Sobic004G206700 Sobic001G199100--Sobic004G348300 Sobic009G075800--Sobic009G222500 Sobic009G075800--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic009G075800--Sobic010G020400 Sobic009G075800--Sobic001G199100 Sobic008G004600 Sobic008G004600 Sobic009G075800--Sobic008G004600 Sobic009G075800--Sobic003G012200 Sobic006G136400 Sobic006G136400 Sobic009G075800--Sobic006G136400 Sobic001G392300 Sobic001G392300 Sobic009G075800--Sobic001G392300 Sobic007G071900 Sobic007G071900 Sobic009G075800--Sobic007G071900 Sobic003G063000--Sobic009G259400 Sobic003G063000--Sobic004G006200 Sobic003G063000--Sobic004G348300 Sobic001G000200 Sobic001G000200 Sobic003G063000--Sobic001G000200 Sobic003G063000--Sobic002G352600 Sobic003G063000--Sobic009G217100 Sobic007G062600 Sobic007G062600 Sobic003G063000--Sobic007G062600 Sobic001G121200 Sobic001G121200 Sobic003G063000--Sobic001G121200 Sobic004G066200 Sobic004G066200 Sobic003G063000--Sobic004G066200
Octagon: transcription factors


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