Gene annotation
Transcriptome id Sobic.007G224500.2,Sobic.007G224500.3
Synonym Sb07g028970
Functional annotation expressed protein
UniProt C5YJP5
Pfam -
Panther DB PTHR36078 PTHR36078:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g38010.1 : expressed protein
MaizeGDB (Corn) Zm00025a004959
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
2 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
3 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
4 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
5 Sobic.010G057900 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
6 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
7 Sobic.009G222500 expressed protein -
8 Sobic.007G098200 - -
9 Sobic.006G103200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
10 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
11 Sobic.004G127900 Leucine Rich Repeat family protein, expressed K10268: F-box and leucine-rich repeat protein 2/20
12 Sobic.003G063000 expressed protein -
13 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
14 Sobic.004G210800 iron-stress related protein, putative, expressed -
15 Sobic.001G181700 expressed protein -
16 Sobic.003G178900 RNAse P Rpr2/Rpp21 subunit domain containing protein, expressed -
17 Sobic.002G300700 peptidyl-prolyl cis-trans isomerase, putative, expressed -
18 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
19 Sobic.004G232800 expressed protein -
20 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -


Gene co-expression network
sample Sobic007G224500 Sobic007G224500 Sobic009G259400 Sobic009G259400 Sobic007G224500--Sobic009G259400 Sobic003G012200 Sobic003G012200 Sobic007G224500--Sobic003G012200 Sobic001G199100 Sobic001G199100 Sobic007G224500--Sobic001G199100 Sobic009G075800 Sobic009G075800 Sobic007G224500--Sobic009G075800 Sobic010G057900 Sobic010G057900 Sobic007G224500--Sobic010G057900 Sobic004G348300 Sobic004G348300 Sobic007G224500--Sobic004G348300 Sobic009G222500 Sobic009G222500 Sobic007G224500--Sobic009G222500 Sobic007G098200 Sobic007G098200 Sobic007G224500--Sobic007G098200 Sobic006G103200 Sobic006G103200 Sobic007G224500--Sobic006G103200 Sobic004G121100 Sobic004G121100 Sobic009G259400--Sobic004G121100 Sobic002G395801 Sobic002G395801 Sobic009G259400--Sobic002G395801 Sobic009G259400--Sobic003G012200 Sobic009G217100 Sobic009G217100 Sobic009G259400--Sobic009G217100 Sobic003G063000 Sobic003G063000 Sobic009G259400--Sobic003G063000 Sobic010G251000 Sobic010G251000 Sobic009G259400--Sobic010G251000 Sobic006G200600 Sobic006G200600 Sobic009G259400--Sobic006G200600 Sobic001G281600 Sobic001G281600 Sobic009G259400--Sobic001G281600 Sobic008G179700 Sobic008G179700 Sobic009G259400--Sobic008G179700 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic010G000900 Sobic010G000900 Sobic003G012200--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G012200--Sobic001G085100 Sobic003G012200--Sobic004G348300 Sobic003G012200--Sobic009G075800 Sobic004G275700 Sobic004G275700 Sobic003G012200--Sobic004G275700 Sobic003G012200--Sobic009G259400 Sobic001G047400 Sobic001G047400 Sobic003G012200--Sobic001G047400 Sobic001G199100--Sobic003G012200 Sobic001G199100--Sobic004G275700 Sobic001G199100--Sobic009G075800 Sobic009G207000 Sobic009G207000 Sobic001G199100--Sobic009G207000 Sobic008G093000 Sobic008G093000 Sobic001G199100--Sobic008G093000 Sobic001G091300 Sobic001G091300 Sobic001G199100--Sobic001G091300 Sobic002G226900 Sobic002G226900 Sobic001G199100--Sobic002G226900 Sobic004G206700 Sobic004G206700 Sobic001G199100--Sobic004G206700 Sobic001G199100--Sobic004G348300 Sobic009G075800--Sobic009G222500 Sobic009G075800--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic009G075800--Sobic010G020400 Sobic009G075800--Sobic001G199100 Sobic008G004600 Sobic008G004600 Sobic009G075800--Sobic008G004600 Sobic009G075800--Sobic003G012200 Sobic006G136400 Sobic006G136400 Sobic009G075800--Sobic006G136400 Sobic001G392300 Sobic001G392300 Sobic009G075800--Sobic001G392300 Sobic007G071900 Sobic007G071900 Sobic009G075800--Sobic007G071900 Sobic002G268400 Sobic002G268400 Sobic010G057900--Sobic002G268400 Sobic006G101700 Sobic006G101700 Sobic010G057900--Sobic006G101700 Sobic002G143000 Sobic002G143000 Sobic010G057900--Sobic002G143000 Sobic001G078800 Sobic001G078800 Sobic010G057900--Sobic001G078800 Sobic003G314100 Sobic003G314100 Sobic010G057900--Sobic003G314100 Sobic009G192000 Sobic009G192000 Sobic010G057900--Sobic009G192000 Sobic010G205300 Sobic010G205300 Sobic010G057900--Sobic010G205300 Sobic001G458700 Sobic001G458700 Sobic010G057900--Sobic001G458700 Sobic004G356900 Sobic004G356900 Sobic010G057900--Sobic004G356900 Sobic004G348300--Sobic003G012200 Sobic004G348300--Sobic003G344900 Sobic004G348300--Sobic001G199100 Sobic002G352600 Sobic002G352600 Sobic004G348300--Sobic002G352600 Sobic006G249700 Sobic006G249700 Sobic004G348300--Sobic006G249700 Sobic004G006200 Sobic004G006200 Sobic004G348300--Sobic004G006200 Sobic002G059300 Sobic002G059300 Sobic004G348300--Sobic002G059300 Sobic004G348300--Sobic009G217100 Sobic005G004200 Sobic005G004200 Sobic004G348300--Sobic005G004200 Sobic009G222500--Sobic009G075800 Sobic006G049700 Sobic006G049700 Sobic009G222500--Sobic006G049700 Sobic001G080700 Sobic001G080700 Sobic009G222500--Sobic001G080700 Sobic009G222500--Sobic006G101700 Sobic004G066200 Sobic004G066200 Sobic009G222500--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic009G222500--Sobic007G166400 Sobic010G027600 Sobic010G027600 Sobic009G222500--Sobic010G027600 Sobic003G264200 Sobic003G264200 Sobic009G222500--Sobic003G264200 Sobic004G235000 Sobic004G235000 Sobic009G222500--Sobic004G235000 Sobic008G156700 Sobic008G156700 Sobic007G098200--Sobic008G156700 Sobic007G098200--Sobic001G199100 Sobic007G098200--Sobic002G226900 Sobic007G098200--Sobic003G012200 Sobic007G098200--Sobic009G075800 Sobic007G098200--Sobic001G047400 Sobic004G212200 Sobic004G212200 Sobic007G098200--Sobic004G212200 Sobic002G393500 Sobic002G393500 Sobic007G098200--Sobic002G393500 Sobic007G098200--Sobic004G275700 Sobic009G201700 Sobic009G201700 Sobic006G103200--Sobic009G201700 Sobic002G359400 Sobic002G359400 Sobic006G103200--Sobic002G359400 Sobic008G055900 Sobic008G055900 Sobic006G103200--Sobic008G055900 Sobic006G103200--Sobic008G004600 Sobic006G103200--Sobic006G136400 Sobic006G103200--Sobic009G075800 Sobic006G103200--Sobic004G275700 Sobic006G103200--Sobic001G199100 Sobic001G007000 Sobic001G007000 Sobic006G103200--Sobic001G007000
Octagon: transcription factors


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