Gene annotation
Transcriptome id Sobic.002G269600.1
Synonym Sb02g030350, RAP2.11, ethylene response factor 30, SbERF30
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5X629
Pfam PF00847
Panther DB PTHR31194 PTHR31194:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G19790 : related to AP2 11
RAP-DB (Rice) LOC_Os07g10410.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047711 , Zm00025a049794
Brachypodium KQJ91112 , KQK15572
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G307600 GTPase activating protein, putative, expressed -
2 Sobic.001G495148 - -
3 Sobic.001G034900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
4 Sobic.004G325200 60S ribosome subunit biogenesis protein NIP7, putative, expressed K07565: 60S ribosome subunit biogenesis protein NIP7
5 Sobic.004G280401 - -
6 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.010G059800 hydroxylase, putative, expressed -
8 Sobic.002G373001 - -
9 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
10 Sobic.004G112300 - -
11 Sobic.003G307300 - -
12 Sobic.002G203700 hypothetical protein -
13 Sobic.003G275900 expressed protein -
14 Sobic.010G136000 expressed protein -
15 Sobic.003G268200 VIP1 protein, putative, expressed -
16 Sobic.002G319100 hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
17 Sobic.003G214100 expressed protein -
18 Sobic.007G187800 mtN19, putative, expressed -
19 Sobic.001G114800 - -
20 Sobic.007G025500 amino acid transporter, putative, expressed -


Gene co-expression network
sample Sobic002G269600 Sobic002G269600 Sobic002G307600 Sobic002G307600 Sobic002G269600--Sobic002G307600 Sobic001G495148 Sobic001G495148 Sobic002G269600--Sobic001G495148 Sobic001G034900 Sobic001G034900 Sobic002G269600--Sobic001G034900 Sobic004G325200 Sobic004G325200 Sobic002G269600--Sobic004G325200 Sobic004G280401 Sobic004G280401 Sobic002G269600--Sobic004G280401 Sobic001G317000 Sobic001G317000 Sobic002G269600--Sobic001G317000 Sobic010G059800 Sobic010G059800 Sobic002G269600--Sobic010G059800 Sobic002G373001 Sobic002G373001 Sobic002G269600--Sobic002G373001 Sobic001G192600 Sobic001G192600 Sobic002G269600--Sobic001G192600 Sobic010G067400 Sobic010G067400 Sobic002G307600--Sobic010G067400 Sobic007G127100 Sobic007G127100 Sobic002G307600--Sobic007G127100 Sobic002G416900 Sobic002G416900 Sobic002G307600--Sobic002G416900 Sobic002G389100 Sobic002G389100 Sobic002G307600--Sobic002G389100 Sobic009G187200 Sobic009G187200 Sobic002G307600--Sobic009G187200 Sobic003G135700 Sobic003G135700 Sobic002G307600--Sobic003G135700 Sobic007G169900 Sobic007G169900 Sobic002G307600--Sobic007G169900 Sobic003G416300 Sobic003G416300 Sobic002G307600--Sobic003G416300 Sobic001G114800 Sobic001G114800 Sobic002G307600--Sobic001G114800 Sobic001G319700 Sobic001G319700 Sobic001G495148--Sobic001G319700 Sobic010G102300 Sobic010G102300 Sobic001G495148--Sobic010G102300 Sobic001G357100 Sobic001G357100 Sobic001G495148--Sobic001G357100 Sobic002G139400 Sobic002G139400 Sobic001G495148--Sobic002G139400 Sobic001G495180 Sobic001G495180 Sobic001G495148--Sobic001G495180 Sobic001G495148--Sobic001G317000 Sobic008G068166 Sobic008G068166 Sobic001G495148--Sobic008G068166 Sobic004G115500 Sobic004G115500 Sobic001G495148--Sobic004G115500 Sobic009G043700 Sobic009G043700 Sobic001G495148--Sobic009G043700 Sobic003G073750 Sobic003G073750 Sobic001G034900--Sobic003G073750 Sobic001G034900--Sobic002G389100 Sobic009G158500 Sobic009G158500 Sobic001G034900--Sobic009G158500 Sobic010G221800 Sobic010G221800 Sobic001G034900--Sobic010G221800 Sobic010G070750 Sobic010G070750 Sobic001G034900--Sobic010G070750 Sobic002G210401 Sobic002G210401 Sobic001G034900--Sobic002G210401 Sobic001G508400 Sobic001G508400 Sobic001G034900--Sobic001G508400 Sobic002G318100 Sobic002G318100 Sobic001G034900--Sobic002G318100 Sobic006G012800 Sobic006G012800 Sobic001G034900--Sobic006G012800 Sobic010G054200 Sobic010G054200 Sobic004G325200--Sobic010G054200 Sobic008G100000 Sobic008G100000 Sobic004G325200--Sobic008G100000 Sobic003G244300 Sobic003G244300 Sobic004G325200--Sobic003G244300 Sobic006G081100 Sobic006G081100 Sobic004G325200--Sobic006G081100 Sobic001G225700 Sobic001G225700 Sobic004G325200--Sobic001G225700 Sobic006G115000 Sobic006G115000 Sobic004G325200--Sobic006G115000 Sobic003G268200 Sobic003G268200 Sobic004G325200--Sobic003G268200 Sobic003G073900 Sobic003G073900 Sobic004G325200--Sobic003G073900 Sobic001G510800 Sobic001G510800 Sobic004G325200--Sobic001G510800 Sobic010G171501 Sobic010G171501 Sobic004G280401--Sobic010G171501 Sobic003G325700 Sobic003G325700 Sobic004G280401--Sobic003G325700 Sobic001G280700 Sobic001G280700 Sobic004G280401--Sobic001G280700 Sobic001G345400 Sobic001G345400 Sobic004G280401--Sobic001G345400 Sobic009G234000 Sobic009G234000 Sobic004G280401--Sobic009G234000 Sobic004G110400 Sobic004G110400 Sobic004G280401--Sobic004G110400 Sobic001G130400 Sobic001G130400 Sobic004G280401--Sobic001G130400 Sobic003G277500 Sobic003G277500 Sobic004G280401--Sobic003G277500 Sobic004G333300 Sobic004G333300 Sobic004G280401--Sobic004G333300 Sobic004G088551 Sobic004G088551 Sobic001G317000--Sobic004G088551 Sobic001G423800 Sobic001G423800 Sobic001G317000--Sobic001G423800 Sobic006G275200 Sobic006G275200 Sobic001G317000--Sobic006G275200 Sobic001G119400 Sobic001G119400 Sobic001G317000--Sobic001G119400 Sobic002G195400 Sobic002G195400 Sobic001G317000--Sobic002G195400 Sobic001G097600 Sobic001G097600 Sobic001G317000--Sobic001G097600 Sobic002G261000 Sobic002G261000 Sobic001G317000--Sobic002G261000 Sobic009G183400 Sobic009G183400 Sobic001G317000--Sobic009G183400 Sobic001G038900 Sobic001G038900 Sobic001G317000--Sobic001G038900 Sobic001G059400 Sobic001G059400 Sobic010G059800--Sobic001G059400 Sobic007G115500 Sobic007G115500 Sobic010G059800--Sobic007G115500 Sobic006G246100 Sobic006G246100 Sobic010G059800--Sobic006G246100 Sobic008G188000 Sobic008G188000 Sobic010G059800--Sobic008G188000 Sobic010G052600 Sobic010G052600 Sobic010G059800--Sobic010G052600 Sobic010G135200 Sobic010G135200 Sobic010G059800--Sobic010G135200 Sobic002G138700 Sobic002G138700 Sobic010G059800--Sobic002G138700 Sobic010G083600 Sobic010G083600 Sobic010G059800--Sobic010G083600 Sobic004G192100 Sobic004G192100 Sobic010G059800--Sobic004G192100 Sobic001G449700 Sobic001G449700 Sobic002G373001--Sobic001G449700 Sobic002G034500 Sobic002G034500 Sobic002G373001--Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic003G102200 Sobic003G102200 Sobic002G373001--Sobic003G102200 Sobic002G070200 Sobic002G070200 Sobic002G373001--Sobic002G070200 Sobic002G082600 Sobic002G082600 Sobic002G373001--Sobic002G082600 Sobic002G333400 Sobic002G333400 Sobic002G373001--Sobic002G333400 Sobic004G095600 Sobic004G095600 Sobic002G373001--Sobic004G095600 Sobic002G192000 Sobic002G192000 Sobic001G192600--Sobic002G192000 Sobic001G367600 Sobic001G367600 Sobic001G192600--Sobic001G367600 Sobic001G192600--Sobic001G038900 Sobic006G158600 Sobic006G158600 Sobic001G192600--Sobic006G158600 Sobic001G192600--Sobic001G423800 Sobic001G055600 Sobic001G055600 Sobic001G192600--Sobic001G055600 Sobic001G481100 Sobic001G481100 Sobic001G192600--Sobic001G481100 Sobic009G221400 Sobic009G221400 Sobic001G192600--Sobic009G221400 Sobic002G353900 Sobic002G353900 Sobic001G192600--Sobic002G353900
Octagon: transcription factors


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