Gene annotation
Transcriptome id Sobic.002G278400.1
Synonym
Functional annotation -
UniProt A0A1B6QDU4 , Q8W0U0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a025452
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G427400 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
2 Sobic.009G173300 spotted leaf 11, putative, expressed -
3 Sobic.006G216500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G138700 - -
5 Sobic.001G153700 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
7 Sobic.007G175200 carrier, putative, expressed -
8 Sobic.003G323100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.004G338200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsWAK24 - OsWAK receptor-like protein kinase, expressed -
10 Sobic.001G020200 ZOS3-24 - C2H2 zinc finger protein, expressed -
11 Sobic.004G319700 ethylene-responsive transcription factor, putative, expressed -
12 Sobic.007G159300 basic helix-loop-helix, putative, expressed -
13 Sobic.003G039800 expressed protein -
14 Sobic.006G252532 - -
15 Sobic.002G383050 - -
16 Sobic.006G062433 - -
17 Sobic.008G141501 - -
18 Sobic.006G163401 - -
19 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.003G392800 gibberellin response modulator protein, putative, expressed -


Gene co-expression network
sample Sobic002G278400 Sobic002G278400 Sobic003G427400 Sobic003G427400 Sobic002G278400--Sobic003G427400 Sobic009G173300 Sobic009G173300 Sobic002G278400--Sobic009G173300 Sobic006G216500 Sobic006G216500 Sobic002G278400--Sobic006G216500 Sobic001G138700 Sobic001G138700 Sobic002G278400--Sobic001G138700 Sobic001G153700 Sobic001G153700 Sobic002G278400--Sobic001G153700 Sobic001G052500 Sobic001G052500 Sobic002G278400--Sobic001G052500 Sobic007G175200 Sobic007G175200 Sobic002G278400--Sobic007G175200 Sobic003G323100 Sobic003G323100 Sobic002G278400--Sobic003G323100 Sobic004G338200 Sobic004G338200 Sobic002G278400--Sobic004G338200 Sobic006G163033 Sobic006G163033 Sobic003G427400--Sobic006G163033 Sobic003G076100 Sobic003G076100 Sobic003G427400--Sobic003G076100 Sobic003G427400--Sobic001G052500 Sobic007G122866 Sobic007G122866 Sobic003G427400--Sobic007G122866 Sobic004G271100 Sobic004G271100 Sobic003G427400--Sobic004G271100 Sobic001G349300 Sobic001G349300 Sobic003G427400--Sobic001G349300 Sobic006G205800 Sobic006G205800 Sobic003G427400--Sobic006G205800 Sobic003G314200 Sobic003G314200 Sobic003G427400--Sobic003G314200 Sobic003G427400--Sobic004G338200 Sobic008G150400 Sobic008G150400 Sobic009G173300--Sobic008G150400 Sobic009G173300--Sobic006G216500 Sobic001G020200 Sobic001G020200 Sobic009G173300--Sobic001G020200 Sobic006G184400 Sobic006G184400 Sobic009G173300--Sobic006G184400 Sobic004G305000 Sobic004G305000 Sobic009G173300--Sobic004G305000 Sobic009G028300 Sobic009G028300 Sobic009G173300--Sobic009G028300 Sobic009G173300--Sobic004G338200 Sobic009G173300--Sobic002G278400 Sobic010G086400 Sobic010G086400 Sobic009G173300--Sobic010G086400 Sobic004G283300 Sobic004G283300 Sobic006G216500--Sobic004G283300 Sobic001G081600 Sobic001G081600 Sobic006G216500--Sobic001G081600 Sobic004G281200 Sobic004G281200 Sobic006G216500--Sobic004G281200 Sobic010G272000 Sobic010G272000 Sobic006G216500--Sobic010G272000 Sobic006G184800 Sobic006G184800 Sobic006G216500--Sobic006G184800 Sobic001G476400 Sobic001G476400 Sobic006G216500--Sobic001G476400 Sobic010G016500 Sobic010G016500 Sobic006G216500--Sobic010G016500 Sobic002G217100 Sobic002G217100 Sobic006G216500--Sobic002G217100 Sobic002G344700 Sobic002G344700 Sobic006G216500--Sobic002G344700 Sobic006G217950 Sobic006G217950 Sobic001G138700--Sobic006G217950 Sobic004G204300 Sobic004G204300 Sobic001G138700--Sobic004G204300 Sobic009G200750 Sobic009G200750 Sobic001G138700--Sobic009G200750 Sobic006G252532 Sobic006G252532 Sobic001G138700--Sobic006G252532 Sobic008G110151 Sobic008G110151 Sobic001G138700--Sobic008G110151 Sobic003G199650 Sobic003G199650 Sobic001G138700--Sobic003G199650 Sobic004G020500 Sobic004G020500 Sobic001G138700--Sobic004G020500 Sobic010G023066 Sobic010G023066 Sobic001G138700--Sobic010G023066 Sobic003G188700 Sobic003G188700 Sobic001G138700--Sobic003G188700 Sobic009G258300 Sobic009G258300 Sobic001G153700--Sobic009G258300 Sobic001G153700--Sobic006G216500 Sobic003G293600 Sobic003G293600 Sobic001G153700--Sobic003G293600 Sobic001G153700--Sobic006G184800 Sobic002G203000 Sobic002G203000 Sobic001G153700--Sobic002G203000 Sobic001G051600 Sobic001G051600 Sobic001G153700--Sobic001G051600 Sobic001G092600 Sobic001G092600 Sobic001G153700--Sobic001G092600 Sobic006G005600 Sobic006G005600 Sobic001G153700--Sobic006G005600 Sobic001G153700--Sobic004G283300 Sobic001G052500--Sobic007G122866 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic010G072200 Sobic010G072200 Sobic001G052500--Sobic010G072200 Sobic006G253700 Sobic006G253700 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic003G085750 Sobic003G085750 Sobic001G052500--Sobic003G085750 Sobic001G052500--Sobic006G252532 Sobic009G217600 Sobic009G217600 Sobic007G175200--Sobic009G217600 Sobic004G319700 Sobic004G319700 Sobic007G175200--Sobic004G319700 Sobic009G120800 Sobic009G120800 Sobic007G175200--Sobic009G120800 Sobic004G280900 Sobic004G280900 Sobic007G175200--Sobic004G280900 Sobic001G192800 Sobic001G192800 Sobic007G175200--Sobic001G192800 Sobic001G341600 Sobic001G341600 Sobic007G175200--Sobic001G341600 Sobic003G361100 Sobic003G361100 Sobic007G175200--Sobic003G361100 Sobic005G037000 Sobic005G037000 Sobic007G175200--Sobic005G037000 Sobic003G353800 Sobic003G353800 Sobic007G175200--Sobic003G353800 Sobic003G338900 Sobic003G338900 Sobic003G323100--Sobic003G338900 Sobic003G323100--Sobic001G476400 Sobic003G323100--Sobic001G341600 Sobic003G323100--Sobic002G217100 Sobic001G398500 Sobic001G398500 Sobic003G323100--Sobic001G398500 Sobic003G323100--Sobic009G217600 Sobic003G323100--Sobic009G120800 Sobic001G051800 Sobic001G051800 Sobic003G323100--Sobic001G051800 Sobic010G076600 Sobic010G076600 Sobic003G323100--Sobic010G076600 Sobic004G338200--Sobic001G020200 Sobic004G243000 Sobic004G243000 Sobic004G338200--Sobic004G243000 Sobic004G338200--Sobic003G314200 Sobic007G227500 Sobic007G227500 Sobic004G338200--Sobic007G227500 Sobic008G040800 Sobic008G040800 Sobic004G338200--Sobic008G040800 Sobic009G182500 Sobic009G182500 Sobic004G338200--Sobic009G182500 Sobic003G268800 Sobic003G268800 Sobic004G338200--Sobic003G268800 Sobic009G161700 Sobic009G161700 Sobic004G338200--Sobic009G161700 Sobic006G094800 Sobic006G094800 Sobic004G338200--Sobic006G094800
Octagon: transcription factors


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