Gene annotation
Transcriptome id Sobic.006G062433.1
Synonym -
Functional annotation -
UniProt A0A1Z5RDK4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G383050 - -
2 Sobic.010G229500 expressed protein -
3 Sobic.002G012400 DUF538 domain containing protein, putative, expressed -
4 Sobic.003G414900 DUF567 domain containing protein, putative, expressed -
5 Sobic.003G265150 - -
6 Sobic.008G158732 - -
7 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
8 Sobic.002G348500 expressed protein -
9 Sobic.005G002700 sorgoleone-producing in root hair(PubmedID : 15361534)@fatty acid desaturase, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
10 Sobic.001G428600 nodulation-signaling pathway 2 protein, putative, expressed -
11 Sobic.003G414800 DUF567 domain containing protein, putative, expressed -
12 Sobic.001G438900 - -
13 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.003G442100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
15 Sobic.002G421501 - -
16 Sobic.006G007900 SbOMT3 is involved in the biosynthesis of the allelochemical sorgoleone. Highly expressed in rrot hairs.(PubMedID : 17998204)@"Catalyse the A ringspecific 3,5-bis-O-methylation of resveratrol, yielding pterostilbene, preference for alkylresorcinolic-type substrates"(PubMedID : 21902799)@Produced pinostilbene as the major product besides a very small amount of pterostilbene from resveratrol in E.coli.(PubMedID : 24267561)@"Methylation activity in the A ring hydroxyl group against resveratrol as well as 3,5-dihydroxy-4'-methoxystilbene"(PubMedID : 25033820)@Catalytic activity for transferring one methyl group to the hydroxyl group at the 3- or 5-position in resveratrol in E.coli. Weak activity for methylation of both hydroxyl groups to generate pterostilbene in E.coli.(PubMedID : 25715927)@O-methyltransferase, putative, expressed -
17 Sobic.001G259900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
18 Sobic.004G349237 - -
19 Sobic.004G156000 dehydrogenase/reductase, putative, expressed -
20 Sobic.005G196700 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic006G062433 Sobic006G062433 Sobic002G383050 Sobic002G383050 Sobic006G062433--Sobic002G383050 Sobic010G229500 Sobic010G229500 Sobic006G062433--Sobic010G229500 Sobic002G012400 Sobic002G012400 Sobic006G062433--Sobic002G012400 Sobic003G414900 Sobic003G414900 Sobic006G062433--Sobic003G414900 Sobic003G265150 Sobic003G265150 Sobic006G062433--Sobic003G265150 Sobic008G158732 Sobic008G158732 Sobic006G062433--Sobic008G158732 Sobic001G052500 Sobic001G052500 Sobic006G062433--Sobic001G052500 Sobic002G348500 Sobic002G348500 Sobic006G062433--Sobic002G348500 Sobic005G002700 Sobic005G002700 Sobic006G062433--Sobic005G002700 Sobic002G383050--Sobic010G229500 Sobic009G205500 Sobic009G205500 Sobic002G383050--Sobic009G205500 Sobic002G383050--Sobic008G158732 Sobic004G156000 Sobic004G156000 Sobic002G383050--Sobic004G156000 Sobic007G148500 Sobic007G148500 Sobic002G383050--Sobic007G148500 Sobic002G383050--Sobic006G062433 Sobic009G032000 Sobic009G032000 Sobic002G383050--Sobic009G032000 Sobic005G013400 Sobic005G013400 Sobic002G383050--Sobic005G013400 Sobic009G201400 Sobic009G201400 Sobic002G383050--Sobic009G201400 Sobic007G122800 Sobic007G122800 Sobic010G229500--Sobic007G122800 Sobic006G007900 Sobic006G007900 Sobic010G229500--Sobic006G007900 Sobic004G064500 Sobic004G064500 Sobic010G229500--Sobic004G064500 Sobic001G259400 Sobic001G259400 Sobic010G229500--Sobic001G259400 Sobic002G358300 Sobic002G358300 Sobic010G229500--Sobic002G358300 Sobic010G229500--Sobic008G158732 Sobic003G268600 Sobic003G268600 Sobic010G229500--Sobic003G268600 Sobic005G086600 Sobic005G086600 Sobic010G229500--Sobic005G086600 Sobic010G229500--Sobic009G032000 Sobic002G012400--Sobic005G086600 Sobic006G008000 Sobic006G008000 Sobic002G012400--Sobic006G008000 Sobic002G012300 Sobic002G012300 Sobic002G012400--Sobic002G012300 Sobic002G012500 Sobic002G012500 Sobic002G012400--Sobic002G012500 Sobic008G066200 Sobic008G066200 Sobic002G012400--Sobic008G066200 Sobic003G079200 Sobic003G079200 Sobic002G012400--Sobic003G079200 Sobic003G414800 Sobic003G414800 Sobic002G012400--Sobic003G414800 Sobic002G012400--Sobic001G259400 Sobic001G188800 Sobic001G188800 Sobic002G012400--Sobic001G188800 Sobic003G414900--Sobic003G265150 Sobic003G414900--Sobic002G012400 Sobic002G266400 Sobic002G266400 Sobic003G414900--Sobic002G266400 Sobic003G414900--Sobic003G414800 Sobic003G414900--Sobic006G062433 Sobic003G414900--Sobic010G229500 Sobic002G361600 Sobic002G361600 Sobic003G414900--Sobic002G361600 Sobic003G414900--Sobic005G002700 Sobic008G158600 Sobic008G158600 Sobic003G414900--Sobic008G158600 Sobic004G349237 Sobic004G349237 Sobic003G265150--Sobic004G349237 Sobic003G265150--Sobic002G361600 Sobic003G265150--Sobic003G414900 Sobic006G138966 Sobic006G138966 Sobic003G265150--Sobic006G138966 Sobic002G421501 Sobic002G421501 Sobic003G265150--Sobic002G421501 Sobic001G512633 Sobic001G512633 Sobic003G265150--Sobic001G512633 Sobic002G372900 Sobic002G372900 Sobic003G265150--Sobic002G372900 Sobic002G185400 Sobic002G185400 Sobic003G265150--Sobic002G185400 Sobic004G034100 Sobic004G034100 Sobic003G265150--Sobic004G034100 Sobic008G158732--Sobic009G205500 Sobic003G427800 Sobic003G427800 Sobic008G158732--Sobic003G427800 Sobic008G158732--Sobic004G156000 Sobic004G229400 Sobic004G229400 Sobic008G158732--Sobic004G229400 Sobic008G158666 Sobic008G158666 Sobic008G158732--Sobic008G158666 Sobic001G195200 Sobic001G195200 Sobic008G158732--Sobic001G195200 Sobic007G017500 Sobic007G017500 Sobic008G158732--Sobic007G017500 Sobic010G064000 Sobic010G064000 Sobic008G158732--Sobic010G064000 Sobic004G292900 Sobic004G292900 Sobic008G158732--Sobic004G292900 Sobic007G122866 Sobic007G122866 Sobic001G052500--Sobic007G122866 Sobic003G076100 Sobic003G076100 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic010G072200 Sobic010G072200 Sobic001G052500--Sobic010G072200 Sobic006G253700 Sobic006G253700 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic003G085750 Sobic003G085750 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic006G097000 Sobic006G097000 Sobic002G348500--Sobic006G097000 Sobic009G065500 Sobic009G065500 Sobic002G348500--Sobic009G065500 Sobic001G100600 Sobic001G100600 Sobic002G348500--Sobic001G100600 Sobic002G354100 Sobic002G354100 Sobic002G348500--Sobic002G354100 Sobic004G229800 Sobic004G229800 Sobic002G348500--Sobic004G229800 Sobic003G322900 Sobic003G322900 Sobic002G348500--Sobic003G322900 Sobic006G132900 Sobic006G132900 Sobic002G348500--Sobic006G132900 Sobic001G435000 Sobic001G435000 Sobic002G348500--Sobic001G435000 Sobic010G259500 Sobic010G259500 Sobic002G348500--Sobic010G259500 Sobic005G002700--Sobic002G012500 Sobic001G487600 Sobic001G487600 Sobic005G002700--Sobic001G487600 Sobic008G022000 Sobic008G022000 Sobic005G002700--Sobic008G022000 Sobic005G002700--Sobic002G012400 Sobic009G171500 Sobic009G171500 Sobic005G002700--Sobic009G171500 Sobic006G096000 Sobic006G096000 Sobic005G002700--Sobic006G096000 Sobic003G426600 Sobic003G426600 Sobic005G002700--Sobic003G426600 Sobic008G036800 Sobic008G036800 Sobic005G002700--Sobic008G036800 Sobic001G280800 Sobic001G280800 Sobic005G002700--Sobic001G280800
Octagon: transcription factors


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