Gene annotation
Transcriptome id Sobic.002G281500.2,Sobic.002G281500.1
Synonym Sb02g031440
Functional annotation expressed protein
UniProt C5X6X6
Pfam -
Panther DB PTHR36081 PTHR36081:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66090 : -
RAP-DB (Rice) LOC_Os09g36990.1 : expressed protein
MaizeGDB (Corn) Zm00025a049298
Brachypodium -
Barley HORVU5Hr1G071230.1 , HORVU5Hr1G084440.5 , HORVU5Hr1G084440.4 , HORVU5Hr1G084440.3 , HORVU5Hr1G084440.2 , HORVU5Hr1G084440.1 , HORVU4Hr1G018620.1 , HORVU2Hr1G079400.1 , HORVU3Hr1G097030.1 , HORVU3Hr1G097030.2 , HORVU1Hr1G008440.2 , HORVU1Hr1G008440.1 , HORVU5Hr1G079170.1
Wheat TraesCS5B02G334100 , TraesCS5D02G339400 , TraesCS5D02G339400 , TraesCS5A02G334600
Populus -


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cDNA sequences
Sobic.002G281500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G032700 "Photosystem II 10kDa polypeptide, chloroplastic (Precursor)"(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@PSBR -photosystem II subunit R (At)(PubMedID : 27208977)@photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed K03541: photosystem II 10kDa protein
2 Sobic.002G169900 hydrolase, NUDIX family, domain containing protein, expressed -
3 Sobic.001G248300 OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed K01303: acylaminoacyl-peptidase
4 Sobic.003G100800 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
5 Sobic.006G003400 expressed protein -
6 Sobic.003G109100 decarboxylase, putative, expressed K01634: SGPL1, sphinganine-1-phosphate aldolase
7 Sobic.001G292200 dynamin family protein, putative, expressed -
8 Sobic.001G166600 semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00145: N-acetyl-gamma-glutamyl-phosphate reductase
9 Sobic.004G127400 CK1_CaseinKinase_1.4 - CK1 includes the casein kinase 1 kinases, expressed -
10 Sobic.002G403500 tetratricopeptide-like helical, putative, expressed -
11 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
12 Sobic.010G205500 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
13 Sobic.002G417800 alpha-galactosidase precursor, putative, expressed K07407: E3.2.1.22B, galA, alpha-galactosidase
14 Sobic.010G099100 CREG1 precursor, putative, expressed -
15 Sobic.007G207200 phenylalanyl-tRNA synthetase beta chain, putative, expressed K01890: FARSB, phenylalanyl-tRNA synthetase beta chain
16 Sobic.005G209100 SCARECROW, putative, expressed -
17 Sobic.007G161800 kinase, pfkB family, putative, expressed -
18 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
19 Sobic.002G140700 triacylglycerol lipase 1 precursor, putative, expressed -
20 Sobic.007G002300 protein kinase family protein, putative, expressed K17535: serine/threonine-protein kinase TNNI3K


Gene co-expression network
sample Sobic002G281500 Sobic002G281500 Sobic002G032700 Sobic002G032700 Sobic002G281500--Sobic002G032700 Sobic002G169900 Sobic002G169900 Sobic002G281500--Sobic002G169900 Sobic001G248300 Sobic001G248300 Sobic002G281500--Sobic001G248300 Sobic003G100800 Sobic003G100800 Sobic002G281500--Sobic003G100800 Sobic006G003400 Sobic006G003400 Sobic002G281500--Sobic006G003400 Sobic003G109100 Sobic003G109100 Sobic002G281500--Sobic003G109100 Sobic001G292200 Sobic001G292200 Sobic002G281500--Sobic001G292200 Sobic001G166600 Sobic001G166600 Sobic002G281500--Sobic001G166600 Sobic004G127400 Sobic004G127400 Sobic002G281500--Sobic004G127400 Sobic002G032700--Sobic006G003400 Sobic002G032700--Sobic002G281500 Sobic009G211000 Sobic009G211000 Sobic002G032700--Sobic009G211000 Sobic002G403500 Sobic002G403500 Sobic002G032700--Sobic002G403500 Sobic001G176600 Sobic001G176600 Sobic002G032700--Sobic001G176600 Sobic002G032700--Sobic001G248300 Sobic005G209100 Sobic005G209100 Sobic002G032700--Sobic005G209100 Sobic002G032700--Sobic002G169900 Sobic001G438600 Sobic001G438600 Sobic002G032700--Sobic001G438600 Sobic002G169900--Sobic001G248300 Sobic010G138000 Sobic010G138000 Sobic002G169900--Sobic010G138000 Sobic007G193700 Sobic007G193700 Sobic002G169900--Sobic007G193700 Sobic010G175500 Sobic010G175500 Sobic002G169900--Sobic010G175500 Sobic001G327800 Sobic001G327800 Sobic002G169900--Sobic001G327800 Sobic007G116200 Sobic007G116200 Sobic002G169900--Sobic007G116200 Sobic006G055200 Sobic006G055200 Sobic002G169900--Sobic006G055200 Sobic010G175400 Sobic010G175400 Sobic002G169900--Sobic010G175400 Sobic002G169900--Sobic009G211000 Sobic004G355000 Sobic004G355000 Sobic001G248300--Sobic004G355000 Sobic001G248300--Sobic002G169900 Sobic001G178700 Sobic001G178700 Sobic001G248300--Sobic001G178700 Sobic004G052900 Sobic004G052900 Sobic001G248300--Sobic004G052900 Sobic005G001000 Sobic005G001000 Sobic001G248300--Sobic005G001000 Sobic009G094300 Sobic009G094300 Sobic001G248300--Sobic009G094300 Sobic010G112000 Sobic010G112000 Sobic001G248300--Sobic010G112000 Sobic004G329400 Sobic004G329400 Sobic001G248300--Sobic004G329400 Sobic004G113400 Sobic004G113400 Sobic001G248300--Sobic004G113400 Sobic003G100800--Sobic004G052900 Sobic007G172400 Sobic007G172400 Sobic003G100800--Sobic007G172400 Sobic003G100800--Sobic003G109100 Sobic007G024700 Sobic007G024700 Sobic003G100800--Sobic007G024700 Sobic003G100800--Sobic004G329400 Sobic003G100800--Sobic001G248300 Sobic003G100800--Sobic001G178700 Sobic010G251200 Sobic010G251200 Sobic003G100800--Sobic010G251200 Sobic003G100800--Sobic004G113400 Sobic006G003400--Sobic004G052900 Sobic006G003400--Sobic001G248300 Sobic002G340100 Sobic002G340100 Sobic006G003400--Sobic002G340100 Sobic006G003400--Sobic004G355000 Sobic006G138400 Sobic006G138400 Sobic006G003400--Sobic006G138400 Sobic006G003400--Sobic001G292200 Sobic006G003400--Sobic001G178700 Sobic006G003400--Sobic002G032700 Sobic003G407300 Sobic003G407300 Sobic006G003400--Sobic003G407300 Sobic003G109100--Sobic004G052900 Sobic003G109100--Sobic007G024700 Sobic001G270400 Sobic001G270400 Sobic003G109100--Sobic001G270400 Sobic003G109100--Sobic003G100800 Sobic003G109100--Sobic009G094300 Sobic006G245400 Sobic006G245400 Sobic003G109100--Sobic006G245400 Sobic001G137100 Sobic001G137100 Sobic003G109100--Sobic001G137100 Sobic003G109100--Sobic002G340100 Sobic010G205800 Sobic010G205800 Sobic003G109100--Sobic010G205800 Sobic001G292200--Sobic002G340100 Sobic002G134200 Sobic002G134200 Sobic001G292200--Sobic002G134200 Sobic003G280800 Sobic003G280800 Sobic001G292200--Sobic003G280800 Sobic002G053000 Sobic002G053000 Sobic001G292200--Sobic002G053000 Sobic005G032800 Sobic005G032800 Sobic001G292200--Sobic005G032800 Sobic008G024600 Sobic008G024600 Sobic001G292200--Sobic008G024600 Sobic003G001100 Sobic003G001100 Sobic001G292200--Sobic003G001100 Sobic001G292200--Sobic001G178700 Sobic001G071400 Sobic001G071400 Sobic001G292200--Sobic001G071400 Sobic007G207200 Sobic007G207200 Sobic001G166600--Sobic007G207200 Sobic002G143500 Sobic002G143500 Sobic001G166600--Sobic002G143500 Sobic006G058100 Sobic006G058100 Sobic001G166600--Sobic006G058100 Sobic009G084900 Sobic009G084900 Sobic001G166600--Sobic009G084900 Sobic004G236400 Sobic004G236400 Sobic001G166600--Sobic004G236400 Sobic009G245800 Sobic009G245800 Sobic001G166600--Sobic009G245800 Sobic001G219600 Sobic001G219600 Sobic001G166600--Sobic001G219600 Sobic003G141500 Sobic003G141500 Sobic001G166600--Sobic003G141500 Sobic002G359400 Sobic002G359400 Sobic001G166600--Sobic002G359400 Sobic009G047200 Sobic009G047200 Sobic004G127400--Sobic009G047200 Sobic004G127400--Sobic002G143500 Sobic004G127400--Sobic001G071400 Sobic004G127400--Sobic007G116200 Sobic006G131500 Sobic006G131500 Sobic004G127400--Sobic006G131500 Sobic006G040500 Sobic006G040500 Sobic004G127400--Sobic006G040500 Sobic002G008900 Sobic002G008900 Sobic004G127400--Sobic002G008900 Sobic001G363500 Sobic001G363500 Sobic004G127400--Sobic001G363500 Sobic004G127400--Sobic006G055200
Octagon: transcription factors


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