Gene annotation
Transcriptome id Sobic.002G292300.2,Sobic.002G292300.1
Synonym Sb02g032350, SLO1
Functional annotation pentatricopeptide, putative, expressed
UniProt C5X7R4
Pfam PF01535 PF13041
Panther DB PTHR24015 PTHR24015:SF864
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G22410 : SLOW GROWTH 1
RAP-DB (Rice) LOC_Os09g38310.1 : pentatricopeptide, putative, expressed
MaizeGDB (Corn) Zm00025a023477 , Zm00025a047939
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G066900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
2 Sobic.003G299200 pentatricopeptide, putative, expressed -
3 Sobic.002G385200 pentatricopeptide, putative, expressed -
4 Sobic.004G174500 - -
5 Sobic.001G256400 pentatricopeptide, putative, expressed -
6 Sobic.001G273650 - -
7 Sobic.006G054000 - -
8 Sobic.001G149100 vegetative storage protein, putative, expressed -
9 Sobic.002G376400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.009G042500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.010G092801 - -
12 Sobic.001G062750 - -
13 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
14 Sobic.003G128000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
15 Sobic.004G176500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
16 Sobic.005G172300 OsFBDUF60 - F-box and DUF domain containing protein, expressed -
17 Sobic.007G174800 carrier, putative, expressed -
18 Sobic.003G034200 - -
19 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
20 Sobic.001G112800 - -


Gene co-expression network
sample Sobic002G292300 Sobic002G292300 Sobic010G066900 Sobic010G066900 Sobic002G292300--Sobic010G066900 Sobic003G299200 Sobic003G299200 Sobic002G292300--Sobic003G299200 Sobic002G385200 Sobic002G385200 Sobic002G292300--Sobic002G385200 Sobic004G174500 Sobic004G174500 Sobic002G292300--Sobic004G174500 Sobic001G256400 Sobic001G256400 Sobic002G292300--Sobic001G256400 Sobic001G273650 Sobic001G273650 Sobic002G292300--Sobic001G273650 Sobic006G054000 Sobic006G054000 Sobic002G292300--Sobic006G054000 Sobic001G149100 Sobic001G149100 Sobic002G292300--Sobic001G149100 Sobic002G376400 Sobic002G376400 Sobic002G292300--Sobic002G376400 Sobic010G066900--Sobic001G149100 Sobic004G176500 Sobic004G176500 Sobic010G066900--Sobic004G176500 Sobic009G238700 Sobic009G238700 Sobic010G066900--Sobic009G238700 Sobic008G163400 Sobic008G163400 Sobic010G066900--Sobic008G163400 Sobic004G241000 Sobic004G241000 Sobic010G066900--Sobic004G241000 Sobic010G066900--Sobic003G299200 Sobic003G239000 Sobic003G239000 Sobic010G066900--Sobic003G239000 Sobic001G347100 Sobic001G347100 Sobic010G066900--Sobic001G347100 Sobic007G123100 Sobic007G123100 Sobic010G066900--Sobic007G123100 Sobic003G299200--Sobic001G149100 Sobic003G299200--Sobic001G347100 Sobic001G081300 Sobic001G081300 Sobic003G299200--Sobic001G081300 Sobic001G401400 Sobic001G401400 Sobic003G299200--Sobic001G401400 Sobic003G299200--Sobic009G238700 Sobic003G299200--Sobic008G163400 Sobic002G267600 Sobic002G267600 Sobic003G299200--Sobic002G267600 Sobic003G051500 Sobic003G051500 Sobic003G299200--Sobic003G051500 Sobic001G040600 Sobic001G040600 Sobic003G299200--Sobic001G040600 Sobic005G210700 Sobic005G210700 Sobic002G385200--Sobic005G210700 Sobic005G148500 Sobic005G148500 Sobic002G385200--Sobic005G148500 Sobic001G182300 Sobic001G182300 Sobic002G385200--Sobic001G182300 Sobic005G148400 Sobic005G148400 Sobic002G385200--Sobic005G148400 Sobic006G099501 Sobic006G099501 Sobic002G385200--Sobic006G099501 Sobic001G001200 Sobic001G001200 Sobic002G385200--Sobic001G001200 Sobic008G066900 Sobic008G066900 Sobic002G385200--Sobic008G066900 Sobic007G179600 Sobic007G179600 Sobic002G385200--Sobic007G179600 Sobic010G143400 Sobic010G143400 Sobic002G385200--Sobic010G143400 Sobic004G043600 Sobic004G043600 Sobic004G174500--Sobic004G043600 Sobic003G142400 Sobic003G142400 Sobic004G174500--Sobic003G142400 Sobic008G014300 Sobic008G014300 Sobic004G174500--Sobic008G014300 Sobic003G113400 Sobic003G113400 Sobic004G174500--Sobic003G113400 Sobic010G277000 Sobic010G277000 Sobic004G174500--Sobic010G277000 Sobic007G191600 Sobic007G191600 Sobic004G174500--Sobic007G191600 Sobic001G268300 Sobic001G268300 Sobic004G174500--Sobic001G268300 Sobic001G311833 Sobic001G311833 Sobic004G174500--Sobic001G311833 Sobic001G013200 Sobic001G013200 Sobic004G174500--Sobic001G013200 Sobic001G256400--Sobic009G238700 Sobic001G256400--Sobic010G066900 Sobic001G256400--Sobic001G347100 Sobic001G256400--Sobic002G385200 Sobic001G412200 Sobic001G412200 Sobic001G256400--Sobic001G412200 Sobic001G256400--Sobic007G179600 Sobic003G203100 Sobic003G203100 Sobic001G256400--Sobic003G203100 Sobic004G128666 Sobic004G128666 Sobic001G256400--Sobic004G128666 Sobic001G256400--Sobic003G299200 Sobic004G022700 Sobic004G022700 Sobic001G273650--Sobic004G022700 Sobic003G104800 Sobic003G104800 Sobic001G273650--Sobic003G104800 Sobic008G074800 Sobic008G074800 Sobic001G273650--Sobic008G074800 Sobic003G277850 Sobic003G277850 Sobic001G273650--Sobic003G277850 Sobic003G076100 Sobic003G076100 Sobic001G273650--Sobic003G076100 Sobic010G170800 Sobic010G170800 Sobic001G273650--Sobic010G170800 Sobic003G377400 Sobic003G377400 Sobic001G273650--Sobic003G377400 Sobic007G079500 Sobic007G079500 Sobic001G273650--Sobic007G079500 Sobic005G103800 Sobic005G103800 Sobic001G273650--Sobic005G103800 Sobic006G054000--Sobic010G066900 Sobic006G054000--Sobic001G412200 Sobic010G088200 Sobic010G088200 Sobic006G054000--Sobic010G088200 Sobic006G054000--Sobic004G176500 Sobic001G436600 Sobic001G436600 Sobic006G054000--Sobic001G436600 Sobic006G054000--Sobic009G238700 Sobic006G054000--Sobic004G128666 Sobic002G098600 Sobic002G098600 Sobic006G054000--Sobic002G098600 Sobic006G054000--Sobic002G385200 Sobic001G149100--Sobic001G347100 Sobic001G149100--Sobic003G299200 Sobic010G252700 Sobic010G252700 Sobic001G149100--Sobic010G252700 Sobic008G179000 Sobic008G179000 Sobic001G149100--Sobic008G179000 Sobic001G149100--Sobic004G241000 Sobic001G149100--Sobic008G163400 Sobic001G149100--Sobic003G239000 Sobic006G069100 Sobic006G069100 Sobic001G149100--Sobic006G069100 Sobic001G149100--Sobic002G267600 Sobic001G341300 Sobic001G341300 Sobic002G376400--Sobic001G341300 Sobic004G216700 Sobic004G216700 Sobic002G376400--Sobic004G216700 Sobic003G401400 Sobic003G401400 Sobic002G376400--Sobic003G401400 Sobic008G185900 Sobic008G185900 Sobic002G376400--Sobic008G185900 Sobic009G129500 Sobic009G129500 Sobic002G376400--Sobic009G129500 Sobic009G159700 Sobic009G159700 Sobic002G376400--Sobic009G159700 Sobic009G166801 Sobic009G166801 Sobic002G376400--Sobic009G166801 Sobic005G172300 Sobic005G172300 Sobic002G376400--Sobic005G172300 Sobic010G072300 Sobic010G072300 Sobic002G376400--Sobic010G072300
Octagon: transcription factors


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