Gene annotation
Transcriptome id Sobic.004G174500.1
Synonym
Functional annotation -
UniProt A0A194YQ84
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G174500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G043600 expressed protein -
2 Sobic.003G142400 pentatricopeptide, putative, expressed -
3 Sobic.008G014300 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
4 Sobic.003G113400 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
5 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
6 Sobic.007G191600 exosome complex exonuclease, putative, expressed K12586: RRP43, EXOSC8, exosome complex component RRP43
7 Sobic.001G268300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@queuine tRNA-ribosyltransferase, putative, expressed K15407: queuine tRNA-ribosyltransferase subunit QTRTD1
8 Sobic.001G311833 - -
9 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
10 Sobic.004G282500 PPR repeat domain containing protein, putative, expressed -
11 Sobic.001G204700 expressed protein -
12 Sobic.006G262800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
13 Sobic.003G211700 expressed protein -
14 Sobic.003G167000 protein phosphotase protein, putative, expressed -
15 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
16 Sobic.010G167601 - -
17 Sobic.009G206600 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
18 Sobic.007G184200 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
19 Sobic.009G188700 OsSigP7 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K09647: mitochondrial inner membrane protease subunit 1
20 Sobic.009G041800 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G174500 Sobic004G174500 Sobic004G043600 Sobic004G043600 Sobic004G174500--Sobic004G043600 Sobic003G142400 Sobic003G142400 Sobic004G174500--Sobic003G142400 Sobic008G014300 Sobic008G014300 Sobic004G174500--Sobic008G014300 Sobic003G113400 Sobic003G113400 Sobic004G174500--Sobic003G113400 Sobic010G277000 Sobic010G277000 Sobic004G174500--Sobic010G277000 Sobic007G191600 Sobic007G191600 Sobic004G174500--Sobic007G191600 Sobic001G268300 Sobic001G268300 Sobic004G174500--Sobic001G268300 Sobic001G311833 Sobic001G311833 Sobic004G174500--Sobic001G311833 Sobic001G013200 Sobic001G013200 Sobic004G174500--Sobic001G013200 Sobic004G043600--Sobic003G113400 Sobic003G167000 Sobic003G167000 Sobic004G043600--Sobic003G167000 Sobic001G203600 Sobic001G203600 Sobic004G043600--Sobic001G203600 Sobic007G207600 Sobic007G207600 Sobic004G043600--Sobic007G207600 Sobic003G112600 Sobic003G112600 Sobic004G043600--Sobic003G112600 Sobic004G043600--Sobic003G142400 Sobic007G226800 Sobic007G226800 Sobic004G043600--Sobic007G226800 Sobic001G343000 Sobic001G343000 Sobic004G043600--Sobic001G343000 Sobic003G190600 Sobic003G190600 Sobic004G043600--Sobic003G190600 Sobic003G142400--Sobic001G268300 Sobic006G262800 Sobic006G262800 Sobic003G142400--Sobic006G262800 Sobic010G068900 Sobic010G068900 Sobic003G142400--Sobic010G068900 Sobic001G478900 Sobic001G478900 Sobic003G142400--Sobic001G478900 Sobic003G184300 Sobic003G184300 Sobic003G142400--Sobic003G184300 Sobic008G163400 Sobic008G163400 Sobic003G142400--Sobic008G163400 Sobic004G241000 Sobic004G241000 Sobic003G142400--Sobic004G241000 Sobic008G179000 Sobic008G179000 Sobic003G142400--Sobic008G179000 Sobic009G041800 Sobic009G041800 Sobic003G142400--Sobic009G041800 Sobic008G014300--Sobic001G013200 Sobic008G014300--Sobic003G167000 Sobic002G217500 Sobic002G217500 Sobic008G014300--Sobic002G217500 Sobic006G203900 Sobic006G203900 Sobic008G014300--Sobic006G203900 Sobic009G206600 Sobic009G206600 Sobic008G014300--Sobic009G206600 Sobic005G079500 Sobic005G079500 Sobic008G014300--Sobic005G079500 Sobic006G124300 Sobic006G124300 Sobic008G014300--Sobic006G124300 Sobic010G235000 Sobic010G235000 Sobic008G014300--Sobic010G235000 Sobic002G342000 Sobic002G342000 Sobic008G014300--Sobic002G342000 Sobic003G113400--Sobic003G167000 Sobic003G113400--Sobic009G041800 Sobic004G334200 Sobic004G334200 Sobic003G113400--Sobic004G334200 Sobic003G113400--Sobic007G191600 Sobic003G113400--Sobic001G203600 Sobic003G113400--Sobic004G043600 Sobic002G402500 Sobic002G402500 Sobic003G113400--Sobic002G402500 Sobic010G250000 Sobic010G250000 Sobic003G113400--Sobic010G250000 Sobic001G052100 Sobic001G052100 Sobic003G113400--Sobic001G052100 Sobic008G084100 Sobic008G084100 Sobic010G277000--Sobic008G084100 Sobic010G277000--Sobic007G191600 Sobic001G035400 Sobic001G035400 Sobic010G277000--Sobic001G035400 Sobic001G214900 Sobic001G214900 Sobic010G277000--Sobic001G214900 Sobic003G238500 Sobic003G238500 Sobic010G277000--Sobic003G238500 Sobic001G026600 Sobic001G026600 Sobic010G277000--Sobic001G026600 Sobic002G054000 Sobic002G054000 Sobic010G277000--Sobic002G054000 Sobic003G205400 Sobic003G205400 Sobic010G277000--Sobic003G205400 Sobic005G027300 Sobic005G027300 Sobic010G277000--Sobic005G027300 Sobic007G191600--Sobic010G277000 Sobic003G261100 Sobic003G261100 Sobic007G191600--Sobic003G261100 Sobic007G191600--Sobic005G027300 Sobic003G237400 Sobic003G237400 Sobic007G191600--Sobic003G237400 Sobic007G191600--Sobic003G113400 Sobic007G191600--Sobic008G084100 Sobic001G060300 Sobic001G060300 Sobic007G191600--Sobic001G060300 Sobic001G342200 Sobic001G342200 Sobic007G191600--Sobic001G342200 Sobic001G392800 Sobic001G392800 Sobic007G191600--Sobic001G392800 Sobic001G268300--Sobic009G041800 Sobic001G268300--Sobic008G179000 Sobic001G268300--Sobic006G262800 Sobic002G362200 Sobic002G362200 Sobic001G268300--Sobic002G362200 Sobic008G031200 Sobic008G031200 Sobic001G268300--Sobic008G031200 Sobic001G268300--Sobic003G142400 Sobic010G252200 Sobic010G252200 Sobic001G268300--Sobic010G252200 Sobic004G282500 Sobic004G282500 Sobic001G268300--Sobic004G282500 Sobic005G078700 Sobic005G078700 Sobic001G268300--Sobic005G078700 Sobic003G330200 Sobic003G330200 Sobic001G311833--Sobic003G330200 Sobic010G055400 Sobic010G055400 Sobic001G311833--Sobic010G055400 Sobic008G135701 Sobic008G135701 Sobic001G311833--Sobic008G135701 Sobic001G311833--Sobic004G174500 Sobic001G029000 Sobic001G029000 Sobic001G311833--Sobic001G029000 Sobic001G311833--Sobic010G277000 Sobic003G223500 Sobic003G223500 Sobic001G311833--Sobic003G223500 Sobic002G267600 Sobic002G267600 Sobic001G311833--Sobic002G267600 Sobic001G230200 Sobic001G230200 Sobic001G311833--Sobic001G230200 Sobic001G013200--Sobic003G167000 Sobic007G048700 Sobic007G048700 Sobic001G013200--Sobic007G048700 Sobic001G013200--Sobic001G035400 Sobic001G013200--Sobic008G014300 Sobic001G013200--Sobic006G203900 Sobic009G112900 Sobic009G112900 Sobic001G013200--Sobic009G112900 Sobic003G131300 Sobic003G131300 Sobic001G013200--Sobic003G131300 Sobic010G197900 Sobic010G197900 Sobic001G013200--Sobic010G197900 Sobic007G003100 Sobic007G003100 Sobic001G013200--Sobic007G003100
Octagon: transcription factors


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