Gene annotation
Transcriptome id Sobic.009G188700.1
Synonym Sb09g024760
Functional annotation OsSigP7 - Putative Type I Signal Peptidase homologue
employs a putative Ser/Lys catalytic dyad, expressed
UniProt C5Z0G2
Pfam PF00717
Panther DB PTHR12383 PTHR12383:SF23
NCBI CDD KOG0171; Mitochondrial inner membrane protease, subunit IMP1
KEGG Orthology K09647; mitochondrial inner membrane protease subunit 1
Gene Ontology GO:0016020; membrane GO:0008236serine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT1G53530 : Peptidase S24/S26A/S26B/S26C family protein
RAP-DB (Rice) LOC_Os11g40500.2 : OsSigP7 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed
MaizeGDB (Corn) Zm00025a029332 , Zm00025a057280
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
2 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
3 Sobic.009G041800 PPR repeat domain containing protein, putative, expressed -
4 Sobic.001G413100 nucleotide binding protein, putative, expressed -
5 Sobic.008G025700 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
6 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
7 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
8 Sobic.001G348000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
9 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
10 Sobic.001G219800 methyltransferase, putative, expressed -
11 Sobic.001G290766 - -
12 Sobic.001G268300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@queuine tRNA-ribosyltransferase, putative, expressed K15407: queuine tRNA-ribosyltransferase subunit QTRTD1
13 Sobic.003G016300 SFT2, putative, expressed -
14 Sobic.007G081500 TBC domain containing protein, expressed -
15 Sobic.009G206600 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
16 Sobic.003G074900 expressed protein -
17 Sobic.001G529500 PPR repeat domain containing protein, putative, expressed -
18 Sobic.003G444200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
19 Sobic.005G027300 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
20 Sobic.002G254500 oxidoreductase, putative, expressed K18160: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2


Gene co-expression network
sample Sobic009G188700 Sobic009G188700 Sobic008G084100 Sobic008G084100 Sobic009G188700--Sobic008G084100 Sobic007G048700 Sobic007G048700 Sobic009G188700--Sobic007G048700 Sobic009G041800 Sobic009G041800 Sobic009G188700--Sobic009G041800 Sobic001G413100 Sobic001G413100 Sobic009G188700--Sobic001G413100 Sobic008G025700 Sobic008G025700 Sobic009G188700--Sobic008G025700 Sobic010G277000 Sobic010G277000 Sobic009G188700--Sobic010G277000 Sobic001G013200 Sobic001G013200 Sobic009G188700--Sobic001G013200 Sobic001G348000 Sobic001G348000 Sobic009G188700--Sobic001G348000 Sobic001G140700 Sobic001G140700 Sobic009G188700--Sobic001G140700 Sobic008G084100--Sobic010G277000 Sobic001G035400 Sobic001G035400 Sobic008G084100--Sobic001G035400 Sobic003G238500 Sobic003G238500 Sobic008G084100--Sobic003G238500 Sobic001G073600 Sobic001G073600 Sobic008G084100--Sobic001G073600 Sobic008G084100--Sobic007G048700 Sobic001G370700 Sobic001G370700 Sobic008G084100--Sobic001G370700 Sobic008G084100--Sobic001G413100 Sobic002G232400 Sobic002G232400 Sobic008G084100--Sobic002G232400 Sobic006G203900 Sobic006G203900 Sobic008G084100--Sobic006G203900 Sobic003G167000 Sobic003G167000 Sobic007G048700--Sobic003G167000 Sobic002G070300 Sobic002G070300 Sobic007G048700--Sobic002G070300 Sobic007G048700--Sobic001G035400 Sobic009G220000 Sobic009G220000 Sobic007G048700--Sobic009G220000 Sobic007G003100 Sobic007G003100 Sobic007G048700--Sobic007G003100 Sobic001G347700 Sobic001G347700 Sobic007G048700--Sobic001G347700 Sobic008G132200 Sobic008G132200 Sobic007G048700--Sobic008G132200 Sobic001G343000 Sobic001G343000 Sobic007G048700--Sobic001G343000 Sobic007G048700--Sobic001G013200 Sobic003G130000 Sobic003G130000 Sobic009G041800--Sobic003G130000 Sobic004G212100 Sobic004G212100 Sobic009G041800--Sobic004G212100 Sobic001G011000 Sobic001G011000 Sobic009G041800--Sobic001G011000 Sobic002G367800 Sobic002G367800 Sobic009G041800--Sobic002G367800 Sobic001G167500 Sobic001G167500 Sobic009G041800--Sobic001G167500 Sobic009G041800--Sobic001G413100 Sobic001G268300 Sobic001G268300 Sobic009G041800--Sobic001G268300 Sobic003G113400 Sobic003G113400 Sobic009G041800--Sobic003G113400 Sobic010G134100 Sobic010G134100 Sobic009G041800--Sobic010G134100 Sobic001G413100--Sobic010G134100 Sobic001G413100--Sobic001G167500 Sobic001G413100--Sobic009G041800 Sobic001G413100--Sobic008G084100 Sobic004G069400 Sobic004G069400 Sobic001G413100--Sobic004G069400 Sobic001G176900 Sobic001G176900 Sobic001G413100--Sobic001G176900 Sobic002G304400 Sobic002G304400 Sobic001G413100--Sobic002G304400 Sobic003G388900 Sobic003G388900 Sobic001G413100--Sobic003G388900 Sobic003G388700 Sobic003G388700 Sobic001G413100--Sobic003G388700 Sobic004G164000 Sobic004G164000 Sobic008G025700--Sobic004G164000 Sobic008G025700--Sobic008G084100 Sobic003G074900 Sobic003G074900 Sobic008G025700--Sobic003G074900 Sobic005G079500 Sobic005G079500 Sobic008G025700--Sobic005G079500 Sobic009G001900 Sobic009G001900 Sobic008G025700--Sobic009G001900 Sobic002G387800 Sobic002G387800 Sobic008G025700--Sobic002G387800 Sobic008G025700--Sobic001G035400 Sobic004G294900 Sobic004G294900 Sobic008G025700--Sobic004G294900 Sobic008G025700--Sobic001G013200 Sobic010G277000--Sobic008G084100 Sobic007G191600 Sobic007G191600 Sobic010G277000--Sobic007G191600 Sobic010G277000--Sobic001G035400 Sobic001G214900 Sobic001G214900 Sobic010G277000--Sobic001G214900 Sobic010G277000--Sobic003G238500 Sobic001G026600 Sobic001G026600 Sobic010G277000--Sobic001G026600 Sobic002G054000 Sobic002G054000 Sobic010G277000--Sobic002G054000 Sobic003G205400 Sobic003G205400 Sobic010G277000--Sobic003G205400 Sobic005G027300 Sobic005G027300 Sobic010G277000--Sobic005G027300 Sobic001G013200--Sobic003G167000 Sobic001G013200--Sobic007G048700 Sobic001G013200--Sobic001G035400 Sobic008G014300 Sobic008G014300 Sobic001G013200--Sobic008G014300 Sobic001G013200--Sobic006G203900 Sobic009G112900 Sobic009G112900 Sobic001G013200--Sobic009G112900 Sobic003G131300 Sobic003G131300 Sobic001G013200--Sobic003G131300 Sobic010G197900 Sobic010G197900 Sobic001G013200--Sobic010G197900 Sobic001G013200--Sobic007G003100 Sobic002G268700 Sobic002G268700 Sobic001G348000--Sobic002G268700 Sobic001G192700 Sobic001G192700 Sobic001G348000--Sobic001G192700 Sobic001G348000--Sobic007G048700 Sobic001G348000--Sobic008G132200 Sobic001G348000--Sobic001G347700 Sobic005G210500 Sobic005G210500 Sobic001G348000--Sobic005G210500 Sobic001G348000--Sobic002G232400 Sobic006G271000 Sobic006G271000 Sobic001G348000--Sobic006G271000 Sobic001G286100 Sobic001G286100 Sobic001G348000--Sobic001G286100 Sobic007G125300 Sobic007G125300 Sobic001G140700--Sobic007G125300 Sobic001G140700--Sobic004G069400 Sobic006G094100 Sobic006G094100 Sobic001G140700--Sobic006G094100 Sobic002G236700 Sobic002G236700 Sobic001G140700--Sobic002G236700 Sobic003G212600 Sobic003G212600 Sobic001G140700--Sobic003G212600 Sobic001G140700--Sobic001G268300 Sobic006G120600 Sobic006G120600 Sobic001G140700--Sobic006G120600 Sobic009G087300 Sobic009G087300 Sobic001G140700--Sobic009G087300 Sobic010G250400 Sobic010G250400 Sobic001G140700--Sobic010G250400
Octagon: transcription factors


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