Gene annotation
Transcriptome id Sobic.001G311833.1
Synonym -
Functional annotation -
UniProt A0A1Z5S8R2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G330200 cupin, RmlC-type, putative, expressed -
2 Sobic.010G055400 OsWAK63 - OsWAK receptor-like protein kinase, expressed -
3 Sobic.008G135701 - -
4 Sobic.004G174500 - -
5 Sobic.001G029000 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
6 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
7 Sobic.003G223500 WD domain, G-beta repeat domain containing protein, expressed K14299: nucleoporin SEH1
8 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
9 Sobic.001G230200 inosine triphosphate pyrophosphatase, putative, expressed K01519: inosine triphosphate pyrophosphatase
10 Sobic.009G193850 - -
11 Sobic.007G030600 NOL1/NOP2/sun family protein, putative, expressed -
12 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
13 Sobic.009G151800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
14 Sobic.004G047500 down-regulated TF in developmental senescence(PubMedID : 27586543)@whirly transcription factor domain containing protein, expressed -
15 Sobic.005G178700 OsFBX135 - F-box domain containing protein, expressed -
16 Sobic.006G025000 PCF-like (ClassI) Subclade 8 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
17 Sobic.001G081900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00133: aspartate-semialdehyde dehydrogenase
18 Sobic.003G211700 expressed protein -
19 Sobic.002G139000 OsFBX237 - F-box domain containing protein, expressed -
20 Sobic.003G235700 single-stranded DNA-binding protein, putative, expressed K03111: single-strand DNA-binding protein


Gene co-expression network
sample Sobic001G311833 Sobic001G311833 Sobic003G330200 Sobic003G330200 Sobic001G311833--Sobic003G330200 Sobic010G055400 Sobic010G055400 Sobic001G311833--Sobic010G055400 Sobic008G135701 Sobic008G135701 Sobic001G311833--Sobic008G135701 Sobic004G174500 Sobic004G174500 Sobic001G311833--Sobic004G174500 Sobic001G029000 Sobic001G029000 Sobic001G311833--Sobic001G029000 Sobic010G277000 Sobic010G277000 Sobic001G311833--Sobic010G277000 Sobic003G223500 Sobic003G223500 Sobic001G311833--Sobic003G223500 Sobic002G267600 Sobic002G267600 Sobic001G311833--Sobic002G267600 Sobic001G230200 Sobic001G230200 Sobic001G311833--Sobic001G230200 Sobic003G330200--Sobic001G311833 Sobic005G178700 Sobic005G178700 Sobic003G330200--Sobic005G178700 Sobic001G370300 Sobic001G370300 Sobic003G330200--Sobic001G370300 Sobic006G126200 Sobic006G126200 Sobic003G330200--Sobic006G126200 Sobic010G048900 Sobic010G048900 Sobic003G330200--Sobic010G048900 Sobic009G193850 Sobic009G193850 Sobic003G330200--Sobic009G193850 Sobic003G283300 Sobic003G283300 Sobic003G330200--Sobic003G283300 Sobic001G107300 Sobic001G107300 Sobic003G330200--Sobic001G107300 Sobic001G106900 Sobic001G106900 Sobic003G330200--Sobic001G106900 Sobic001G231200 Sobic001G231200 Sobic010G055400--Sobic001G231200 Sobic001G074100 Sobic001G074100 Sobic010G055400--Sobic001G074100 Sobic005G015300 Sobic005G015300 Sobic010G055400--Sobic005G015300 Sobic001G140700 Sobic001G140700 Sobic010G055400--Sobic001G140700 Sobic003G291000 Sobic003G291000 Sobic010G055400--Sobic003G291000 Sobic009G188900 Sobic009G188900 Sobic010G055400--Sobic009G188900 Sobic002G001100 Sobic002G001100 Sobic010G055400--Sobic002G001100 Sobic007G173000 Sobic007G173000 Sobic010G055400--Sobic007G173000 Sobic001G296800 Sobic001G296800 Sobic010G055400--Sobic001G296800 Sobic007G166600 Sobic007G166600 Sobic008G135701--Sobic007G166600 Sobic001G463500 Sobic001G463500 Sobic008G135701--Sobic001G463500 Sobic007G172600 Sobic007G172600 Sobic008G135701--Sobic007G172600 Sobic002G317600 Sobic002G317600 Sobic008G135701--Sobic002G317600 Sobic006G216000 Sobic006G216000 Sobic008G135701--Sobic006G216000 Sobic003G420900 Sobic003G420900 Sobic008G135701--Sobic003G420900 Sobic002G253100 Sobic002G253100 Sobic008G135701--Sobic002G253100 Sobic008G173000 Sobic008G173000 Sobic008G135701--Sobic008G173000 Sobic008G083400 Sobic008G083400 Sobic008G135701--Sobic008G083400 Sobic004G043600 Sobic004G043600 Sobic004G174500--Sobic004G043600 Sobic003G142400 Sobic003G142400 Sobic004G174500--Sobic003G142400 Sobic008G014300 Sobic008G014300 Sobic004G174500--Sobic008G014300 Sobic003G113400 Sobic003G113400 Sobic004G174500--Sobic003G113400 Sobic004G174500--Sobic010G277000 Sobic007G191600 Sobic007G191600 Sobic004G174500--Sobic007G191600 Sobic001G268300 Sobic001G268300 Sobic004G174500--Sobic001G268300 Sobic004G174500--Sobic001G311833 Sobic001G013200 Sobic001G013200 Sobic004G174500--Sobic001G013200 Sobic001G532100 Sobic001G532100 Sobic001G029000--Sobic001G532100 Sobic008G137600 Sobic008G137600 Sobic001G029000--Sobic008G137600 Sobic007G152400 Sobic007G152400 Sobic001G029000--Sobic007G152400 Sobic002G007100 Sobic002G007100 Sobic001G029000--Sobic002G007100 Sobic006G231700 Sobic006G231700 Sobic001G029000--Sobic006G231700 Sobic010G267900 Sobic010G267900 Sobic001G029000--Sobic010G267900 Sobic001G094500 Sobic001G094500 Sobic001G029000--Sobic001G094500 Sobic001G402300 Sobic001G402300 Sobic001G029000--Sobic001G402300 Sobic002G380000 Sobic002G380000 Sobic001G029000--Sobic002G380000 Sobic008G084100 Sobic008G084100 Sobic010G277000--Sobic008G084100 Sobic010G277000--Sobic007G191600 Sobic001G035400 Sobic001G035400 Sobic010G277000--Sobic001G035400 Sobic001G214900 Sobic001G214900 Sobic010G277000--Sobic001G214900 Sobic003G238500 Sobic003G238500 Sobic010G277000--Sobic003G238500 Sobic001G026600 Sobic001G026600 Sobic010G277000--Sobic001G026600 Sobic002G054000 Sobic002G054000 Sobic010G277000--Sobic002G054000 Sobic003G205400 Sobic003G205400 Sobic010G277000--Sobic003G205400 Sobic005G027300 Sobic005G027300 Sobic010G277000--Sobic005G027300 Sobic001G061800 Sobic001G061800 Sobic003G223500--Sobic001G061800 Sobic003G223500--Sobic005G178700 Sobic004G011000 Sobic004G011000 Sobic003G223500--Sobic004G011000 Sobic001G226000 Sobic001G226000 Sobic003G223500--Sobic001G226000 Sobic001G168100 Sobic001G168100 Sobic003G223500--Sobic001G168100 Sobic002G334600 Sobic002G334600 Sobic003G223500--Sobic002G334600 Sobic007G043400 Sobic007G043400 Sobic003G223500--Sobic007G043400 Sobic007G053400 Sobic007G053400 Sobic003G223500--Sobic007G053400 Sobic002G218700 Sobic002G218700 Sobic003G223500--Sobic002G218700 Sobic008G163400 Sobic008G163400 Sobic002G267600--Sobic008G163400 Sobic003G239000 Sobic003G239000 Sobic002G267600--Sobic003G239000 Sobic001G149100 Sobic001G149100 Sobic002G267600--Sobic001G149100 Sobic007G031300 Sobic007G031300 Sobic002G267600--Sobic007G031300 Sobic003G299200 Sobic003G299200 Sobic002G267600--Sobic003G299200 Sobic008G179000 Sobic008G179000 Sobic002G267600--Sobic008G179000 Sobic004G208100 Sobic004G208100 Sobic002G267600--Sobic004G208100 Sobic001G408300 Sobic001G408300 Sobic002G267600--Sobic001G408300 Sobic004G047500 Sobic004G047500 Sobic002G267600--Sobic004G047500 Sobic003G407600 Sobic003G407600 Sobic001G230200--Sobic003G407600 Sobic009G211700 Sobic009G211700 Sobic001G230200--Sobic009G211700 Sobic010G247400 Sobic010G247400 Sobic001G230200--Sobic010G247400 Sobic006G056600 Sobic006G056600 Sobic001G230200--Sobic006G056600 Sobic003G196800 Sobic003G196800 Sobic001G230200--Sobic003G196800 Sobic003G407800 Sobic003G407800 Sobic001G230200--Sobic003G407800 Sobic001G091900 Sobic001G091900 Sobic001G230200--Sobic001G091900 Sobic001G401400 Sobic001G401400 Sobic001G230200--Sobic001G401400 Sobic001G230200--Sobic005G027300
Octagon: transcription factors


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