Gene annotation
Transcriptome id Sobic.003G330200.2
Synonym Sb03g037620
Functional annotation cupin, RmlC-type, putative, expressed
UniProt A0A1W0W031
Pfam -
Panther DB PTHR37742 PTHR37742:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56820 : -
RAP-DB (Rice) LOC_Os01g59520.2 : cupin, RmlC-type, putative, expressed
MaizeGDB (Corn) Zm00025a027146
Brachypodium -
Barley -
Wheat TraesCS3B02G365800 , TraesCS3D02G328200 , TraesCS6A02G366900 , TraesCS3A02G334900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G311833 - -
2 Sobic.005G178700 OsFBX135 - F-box domain containing protein, expressed -
3 Sobic.001G370300 WD domain, G-beta repeat domain containing protein, expressed K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
4 Sobic.006G126200 alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed K15627: ASPSCR1, tether containing UBX domain for GLUT4
5 Sobic.010G048900 - -
6 Sobic.009G193850 - -
7 Sobic.003G283300 expressed protein -
8 Sobic.001G107300 WD repeat-containing protein 5, putative, expressed K14963: WDR5, SWD3, COMPASS component SWD3
9 Sobic.001G106900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
10 Sobic.001G335201 - -
11 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
12 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
13 Sobic.007G219200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
14 Sobic.009G065200 zinc finger family protein, putative, expressed -
15 Sobic.006G067900 expressed protein -
16 Sobic.003G125100 uncharacterized Cys-rich domain containing protein, putative, expressed -
17 Sobic.001G040300 expressed protein -
18 Sobic.002G192500 ES43 protein, putative, expressed -
19 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A
20 Sobic.002G088700 domain of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic003G330200 Sobic003G330200 Sobic001G311833 Sobic001G311833 Sobic003G330200--Sobic001G311833 Sobic005G178700 Sobic005G178700 Sobic003G330200--Sobic005G178700 Sobic001G370300 Sobic001G370300 Sobic003G330200--Sobic001G370300 Sobic006G126200 Sobic006G126200 Sobic003G330200--Sobic006G126200 Sobic010G048900 Sobic010G048900 Sobic003G330200--Sobic010G048900 Sobic009G193850 Sobic009G193850 Sobic003G330200--Sobic009G193850 Sobic003G283300 Sobic003G283300 Sobic003G330200--Sobic003G283300 Sobic001G107300 Sobic001G107300 Sobic003G330200--Sobic001G107300 Sobic001G106900 Sobic001G106900 Sobic003G330200--Sobic001G106900 Sobic001G311833--Sobic003G330200 Sobic010G055400 Sobic010G055400 Sobic001G311833--Sobic010G055400 Sobic008G135701 Sobic008G135701 Sobic001G311833--Sobic008G135701 Sobic004G174500 Sobic004G174500 Sobic001G311833--Sobic004G174500 Sobic001G029000 Sobic001G029000 Sobic001G311833--Sobic001G029000 Sobic010G277000 Sobic010G277000 Sobic001G311833--Sobic010G277000 Sobic003G223500 Sobic003G223500 Sobic001G311833--Sobic003G223500 Sobic002G267600 Sobic002G267600 Sobic001G311833--Sobic002G267600 Sobic001G230200 Sobic001G230200 Sobic001G311833--Sobic001G230200 Sobic004G227100 Sobic004G227100 Sobic005G178700--Sobic004G227100 Sobic005G178700--Sobic003G223500 Sobic007G143500 Sobic007G143500 Sobic005G178700--Sobic007G143500 Sobic004G235500 Sobic004G235500 Sobic005G178700--Sobic004G235500 Sobic001G401400 Sobic001G401400 Sobic005G178700--Sobic001G401400 Sobic006G067900 Sobic006G067900 Sobic005G178700--Sobic006G067900 Sobic007G030600 Sobic007G030600 Sobic005G178700--Sobic007G030600 Sobic005G178700--Sobic001G370300 Sobic004G226900 Sobic004G226900 Sobic005G178700--Sobic004G226900 Sobic002G077900 Sobic002G077900 Sobic001G370300--Sobic002G077900 Sobic002G177500 Sobic002G177500 Sobic001G370300--Sobic002G177500 Sobic006G245700 Sobic006G245700 Sobic001G370300--Sobic006G245700 Sobic010G247400 Sobic010G247400 Sobic001G370300--Sobic010G247400 Sobic001G285300 Sobic001G285300 Sobic001G370300--Sobic001G285300 Sobic003G439800 Sobic003G439800 Sobic001G370300--Sobic003G439800 Sobic001G023800 Sobic001G023800 Sobic001G370300--Sobic001G023800 Sobic006G252100 Sobic006G252100 Sobic001G370300--Sobic006G252100 Sobic004G057800 Sobic004G057800 Sobic001G370300--Sobic004G057800 Sobic006G183000 Sobic006G183000 Sobic006G126200--Sobic006G183000 Sobic002G256200 Sobic002G256200 Sobic006G126200--Sobic002G256200 Sobic006G094600 Sobic006G094600 Sobic006G126200--Sobic006G094600 Sobic001G444300 Sobic001G444300 Sobic006G126200--Sobic001G444300 Sobic010G073100 Sobic010G073100 Sobic006G126200--Sobic010G073100 Sobic008G145100 Sobic008G145100 Sobic006G126200--Sobic008G145100 Sobic001G294900 Sobic001G294900 Sobic006G126200--Sobic001G294900 Sobic004G075200 Sobic004G075200 Sobic006G126200--Sobic004G075200 Sobic001G404200 Sobic001G404200 Sobic006G126200--Sobic001G404200 Sobic003G211700 Sobic003G211700 Sobic010G048900--Sobic003G211700 Sobic003G445200 Sobic003G445200 Sobic010G048900--Sobic003G445200 Sobic006G153200 Sobic006G153200 Sobic010G048900--Sobic006G153200 Sobic001G013200 Sobic001G013200 Sobic010G048900--Sobic001G013200 Sobic010G048900--Sobic003G330200 Sobic007G070300 Sobic007G070300 Sobic010G048900--Sobic007G070300 Sobic003G167000 Sobic003G167000 Sobic010G048900--Sobic003G167000 Sobic003G113400 Sobic003G113400 Sobic010G048900--Sobic003G113400 Sobic001G335201 Sobic001G335201 Sobic010G048900--Sobic001G335201 Sobic001G041200 Sobic001G041200 Sobic009G193850--Sobic001G041200 Sobic004G011000 Sobic004G011000 Sobic009G193850--Sobic004G011000 Sobic006G216000 Sobic006G216000 Sobic009G193850--Sobic006G216000 Sobic007G162800 Sobic007G162800 Sobic009G193850--Sobic007G162800 Sobic002G148300 Sobic002G148300 Sobic009G193850--Sobic002G148300 Sobic009G193850--Sobic001G404200 Sobic003G118400 Sobic003G118400 Sobic009G193850--Sobic003G118400 Sobic008G080000 Sobic008G080000 Sobic009G193850--Sobic008G080000 Sobic006G242300 Sobic006G242300 Sobic009G193850--Sobic006G242300 Sobic001G451901 Sobic001G451901 Sobic003G283300--Sobic001G451901 Sobic002G241500 Sobic002G241500 Sobic003G283300--Sobic002G241500 Sobic001G110300 Sobic001G110300 Sobic003G283300--Sobic001G110300 Sobic010G197900 Sobic010G197900 Sobic003G283300--Sobic010G197900 Sobic004G113700 Sobic004G113700 Sobic003G283300--Sobic004G113700 Sobic007G217400 Sobic007G217400 Sobic003G283300--Sobic007G217400 Sobic006G231500 Sobic006G231500 Sobic003G283300--Sobic006G231500 Sobic009G001900 Sobic009G001900 Sobic003G283300--Sobic009G001900 Sobic006G181700 Sobic006G181700 Sobic003G283300--Sobic006G181700 Sobic004G343600 Sobic004G343600 Sobic001G107300--Sobic004G343600 Sobic001G505000 Sobic001G505000 Sobic001G107300--Sobic001G505000 Sobic004G047500 Sobic004G047500 Sobic001G107300--Sobic004G047500 Sobic002G353500 Sobic002G353500 Sobic001G107300--Sobic002G353500 Sobic006G013900 Sobic006G013900 Sobic001G107300--Sobic006G013900 Sobic003G109200 Sobic003G109200 Sobic001G107300--Sobic003G109200 Sobic001G440900 Sobic001G440900 Sobic001G107300--Sobic001G440900 Sobic001G162800 Sobic001G162800 Sobic001G107300--Sobic001G162800 Sobic001G436300 Sobic001G436300 Sobic001G107300--Sobic001G436300 Sobic001G106900--Sobic003G330200 Sobic005G132700 Sobic005G132700 Sobic001G106900--Sobic005G132700 Sobic003G311000 Sobic003G311000 Sobic001G106900--Sobic003G311000 Sobic002G088700 Sobic002G088700 Sobic001G106900--Sobic002G088700 Sobic003G281200 Sobic003G281200 Sobic001G106900--Sobic003G281200 Sobic002G399500 Sobic002G399500 Sobic001G106900--Sobic002G399500 Sobic004G153000 Sobic004G153000 Sobic001G106900--Sobic004G153000 Sobic001G106900--Sobic004G057800 Sobic001G106900--Sobic006G126200
Octagon: transcription factors


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