Gene annotation
Transcriptome id Sobic.002G297700.1
Synonym Sb02g032850
Functional annotation SNARE associated Golgi protein, putative, expressed
UniProt C5X8F0
Pfam PF09335
Panther DB PTHR12677 PTHR12677:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G12450 : SNARE associated Golgi protein family
RAP-DB (Rice) LOC_Os07g28440.1 : SNARE associated Golgi protein, putative, expressed
MaizeGDB (Corn) Zm00025a047863 , Zm00025a014591
Brachypodium -
Barley -
Wheat TraesCS2D02G240200 , TraesCS2A02G237600 , TraesCS2B02G256700 , TraesCS2B02G256700
Populus -


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cDNA sequences
Sobic.002G297700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G031600 calmodulin binding protein, putative, expressed -
2 Sobic.002G358800 interferon-related developmental regulator, putative, expressed -
3 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
4 Sobic.009G258100 early-responsive to dehydration protein-related, putative, expressed -
5 Sobic.002G194100 annexin, putative, expressed K17095: annexin A7/11
6 Sobic.002G413000 AAA-type ATPase family protein, putative, expressed -
7 Sobic.008G077600 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
8 Sobic.003G380000 expressed protein -
9 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
10 Sobic.002G217700 growth regulator related protein, putative, expressed -
11 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
12 Sobic.003G356900 expressed protein -
13 Sobic.010G052800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
14 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
15 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -
16 Sobic.009G231200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein of unknown function DUF1421 domain containing protein, expressed -
17 Sobic.004G334000 similar to Putative uncharacterized protein(PubMedID : 29862293)@monogalactosyldiacylglycerol synthase, putative, expressed K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase
18 Sobic.001G450700 RHsf 8/ Hsf 3(PubMedID : 27006630)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
19 Sobic.009G180500 Myb-like DNA-binding domain containing protein, putative, expressed -
20 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase


Gene co-expression network
sample Sobic002G297700 Sobic002G297700 Sobic001G031600 Sobic001G031600 Sobic002G297700--Sobic001G031600 Sobic002G358800 Sobic002G358800 Sobic002G297700--Sobic002G358800 Sobic010G232100 Sobic010G232100 Sobic002G297700--Sobic010G232100 Sobic009G258100 Sobic009G258100 Sobic002G297700--Sobic009G258100 Sobic002G194100 Sobic002G194100 Sobic002G297700--Sobic002G194100 Sobic002G413000 Sobic002G413000 Sobic002G297700--Sobic002G413000 Sobic008G077600 Sobic008G077600 Sobic002G297700--Sobic008G077600 Sobic003G380000 Sobic003G380000 Sobic002G297700--Sobic003G380000 Sobic002G358400 Sobic002G358400 Sobic002G297700--Sobic002G358400 Sobic001G105500 Sobic001G105500 Sobic001G031600--Sobic001G105500 Sobic001G031600--Sobic002G413000 Sobic006G209400 Sobic006G209400 Sobic001G031600--Sobic006G209400 Sobic009G193400 Sobic009G193400 Sobic001G031600--Sobic009G193400 Sobic003G002400 Sobic003G002400 Sobic001G031600--Sobic003G002400 Sobic003G309200 Sobic003G309200 Sobic001G031600--Sobic003G309200 Sobic007G019800 Sobic007G019800 Sobic001G031600--Sobic007G019800 Sobic004G031600 Sobic004G031600 Sobic001G031600--Sobic004G031600 Sobic001G541100 Sobic001G541100 Sobic001G031600--Sobic001G541100 Sobic001G333600 Sobic001G333600 Sobic002G358800--Sobic001G333600 Sobic001G328200 Sobic001G328200 Sobic002G358800--Sobic001G328200 Sobic002G217700 Sobic002G217700 Sobic002G358800--Sobic002G217700 Sobic002G358800--Sobic009G258100 Sobic010G230500 Sobic010G230500 Sobic002G358800--Sobic010G230500 Sobic003G350800 Sobic003G350800 Sobic002G358800--Sobic003G350800 Sobic002G358800--Sobic001G031600 Sobic002G358800--Sobic002G358400 Sobic006G092400 Sobic006G092400 Sobic002G358800--Sobic006G092400 Sobic004G055200 Sobic004G055200 Sobic010G232100--Sobic004G055200 Sobic008G025500 Sobic008G025500 Sobic010G232100--Sobic008G025500 Sobic003G130800 Sobic003G130800 Sobic010G232100--Sobic003G130800 Sobic010G178200 Sobic010G178200 Sobic010G232100--Sobic010G178200 Sobic006G180200 Sobic006G180200 Sobic010G232100--Sobic006G180200 Sobic009G046600 Sobic009G046600 Sobic010G232100--Sobic009G046600 Sobic010G232100--Sobic003G380000 Sobic004G219300 Sobic004G219300 Sobic010G232100--Sobic004G219300 Sobic006G099700 Sobic006G099700 Sobic010G232100--Sobic006G099700 Sobic009G258100--Sobic002G358800 Sobic009G258100--Sobic010G230500 Sobic009G258100--Sobic008G077600 Sobic003G425300 Sobic003G425300 Sobic009G258100--Sobic003G425300 Sobic003G373600 Sobic003G373600 Sobic009G258100--Sobic003G373600 Sobic009G129800 Sobic009G129800 Sobic009G258100--Sobic009G129800 Sobic002G290400 Sobic002G290400 Sobic009G258100--Sobic002G290400 Sobic009G258100--Sobic003G350800 Sobic009G180500 Sobic009G180500 Sobic009G258100--Sobic009G180500 Sobic001G040800 Sobic001G040800 Sobic002G194100--Sobic001G040800 Sobic002G202300 Sobic002G202300 Sobic002G194100--Sobic002G202300 Sobic006G232200 Sobic006G232200 Sobic002G194100--Sobic006G232200 Sobic004G293700 Sobic004G293700 Sobic002G194100--Sobic004G293700 Sobic001G459200 Sobic001G459200 Sobic002G194100--Sobic001G459200 Sobic001G054200 Sobic001G054200 Sobic002G194100--Sobic001G054200 Sobic004G248800 Sobic004G248800 Sobic002G194100--Sobic004G248800 Sobic003G253000 Sobic003G253000 Sobic002G194100--Sobic003G253000 Sobic004G079100 Sobic004G079100 Sobic002G194100--Sobic004G079100 Sobic010G052800 Sobic010G052800 Sobic002G413000--Sobic010G052800 Sobic002G413000--Sobic009G193400 Sobic002G413000--Sobic004G293700 Sobic003G220600 Sobic003G220600 Sobic002G413000--Sobic003G220600 Sobic002G413000--Sobic001G031600 Sobic007G059900 Sobic007G059900 Sobic002G413000--Sobic007G059900 Sobic002G413000--Sobic004G079100 Sobic002G413000--Sobic003G002400 Sobic001G329100 Sobic001G329100 Sobic002G413000--Sobic001G329100 Sobic010G165500 Sobic010G165500 Sobic008G077600--Sobic010G165500 Sobic008G077600--Sobic010G232100 Sobic008G077600--Sobic009G258100 Sobic008G077600--Sobic006G099700 Sobic001G143000 Sobic001G143000 Sobic008G077600--Sobic001G143000 Sobic001G450700 Sobic001G450700 Sobic008G077600--Sobic001G450700 Sobic003G238000 Sobic003G238000 Sobic008G077600--Sobic003G238000 Sobic006G178000 Sobic006G178000 Sobic008G077600--Sobic006G178000 Sobic006G261300 Sobic006G261300 Sobic008G077600--Sobic006G261300 Sobic003G380000--Sobic010G232100 Sobic005G228000 Sobic005G228000 Sobic003G380000--Sobic005G228000 Sobic002G345300 Sobic002G345300 Sobic003G380000--Sobic002G345300 Sobic003G380000--Sobic010G178200 Sobic003G285800 Sobic003G285800 Sobic003G380000--Sobic003G285800 Sobic010G135000 Sobic010G135000 Sobic003G380000--Sobic010G135000 Sobic003G380000--Sobic009G046600 Sobic004G157000 Sobic004G157000 Sobic003G380000--Sobic004G157000 Sobic002G046100 Sobic002G046100 Sobic003G380000--Sobic002G046100 Sobic002G047700 Sobic002G047700 Sobic002G358400--Sobic002G047700 Sobic001G031100 Sobic001G031100 Sobic002G358400--Sobic001G031100 Sobic009G192000 Sobic009G192000 Sobic002G358400--Sobic009G192000 Sobic001G019800 Sobic001G019800 Sobic002G358400--Sobic001G019800 Sobic003G373500 Sobic003G373500 Sobic002G358400--Sobic003G373500 Sobic003G264200 Sobic003G264200 Sobic002G358400--Sobic003G264200 Sobic001G406100 Sobic001G406100 Sobic002G358400--Sobic001G406100 Sobic003G354600 Sobic003G354600 Sobic002G358400--Sobic003G354600 Sobic004G070700 Sobic004G070700 Sobic002G358400--Sobic004G070700
Octagon: transcription factors


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