Gene annotation
Transcriptome id Sobic.003G356900.1
Synonym Sb03g039920
Functional annotation expressed protein
UniProt C5XPT8
Pfam -
Panther DB PTHR33356 PTHR33356:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54000 : -
RAP-DB (Rice) LOC_Os01g63050.1 : expressed protein
MaizeGDB (Corn) Zm00025a026846 , Zm00025a039646
Brachypodium KQK05958
Barley HORVU3Hr1G085640.8 , HORVU3Hr1G085640.9 , HORVU3Hr1G085640.4 , HORVU3Hr1G085640.5 , HORVU3Hr1G085640.6 , HORVU3Hr1G085640.7 , HORVU3Hr1G085640.1 , HORVU3Hr1G085640.2 , HORVU3Hr1G085640.3 , HORVU3Hr1G085640.10 , HORVU3Hr1G085640.11
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G220700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Lyase(PubMedID : 30367619)@phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
2 Sobic.006G099700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine hydrolase domain containing protein, expressed -
3 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
4 Sobic.002G358800 interferon-related developmental regulator, putative, expressed -
5 Sobic.002G297700 SNARE associated Golgi protein, putative, expressed -
6 Sobic.010G183600 bZIP transcription factor domain containing protein, expressed K16241: transcription factor HY5
7 Sobic.009G016000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
8 Sobic.007G137600 NADP-dependent malate dehydrogenase(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
9 Sobic.008G110300 OsFBX448 - F-box domain containing protein, expressed -
10 Sobic.009G258100 early-responsive to dehydration protein-related, putative, expressed -
11 Sobic.003G380000 expressed protein -
12 Sobic.004G084900 SPX domain containing protein, putative, expressed -
13 Sobic.009G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
14 Sobic.010G230500 expressed protein -
15 Sobic.008G025500 DUF567 domain containing protein, putative, expressed -
16 Sobic.010G278000 expressed protein -
17 Sobic.007G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
18 Sobic.008G077600 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
19 Sobic.010G165500 ABC-2 type transporter, putative, expressed -
20 Sobic.003G350800 SLT1 protein, putative, expressed -


Gene co-expression network
sample Sobic003G356900 Sobic003G356900 Sobic004G220700 Sobic004G220700 Sobic003G356900--Sobic004G220700 Sobic006G099700 Sobic006G099700 Sobic003G356900--Sobic006G099700 Sobic010G232100 Sobic010G232100 Sobic003G356900--Sobic010G232100 Sobic002G358800 Sobic002G358800 Sobic003G356900--Sobic002G358800 Sobic002G297700 Sobic002G297700 Sobic003G356900--Sobic002G297700 Sobic010G183600 Sobic010G183600 Sobic003G356900--Sobic010G183600 Sobic009G016000 Sobic009G016000 Sobic003G356900--Sobic009G016000 Sobic007G137600 Sobic007G137600 Sobic003G356900--Sobic007G137600 Sobic008G110300 Sobic008G110300 Sobic003G356900--Sobic008G110300 Sobic004G220700--Sobic009G016000 Sobic004G220700--Sobic006G099700 Sobic004G060832 Sobic004G060832 Sobic004G220700--Sobic004G060832 Sobic004G220700--Sobic003G356900 Sobic004G220700--Sobic002G358800 Sobic010G104100 Sobic010G104100 Sobic004G220700--Sobic010G104100 Sobic004G084900 Sobic004G084900 Sobic004G220700--Sobic004G084900 Sobic008G025500 Sobic008G025500 Sobic004G220700--Sobic008G025500 Sobic004G220700--Sobic010G232100 Sobic006G099700--Sobic008G025500 Sobic007G088000 Sobic007G088000 Sobic006G099700--Sobic007G088000 Sobic006G099700--Sobic010G232100 Sobic010G165500 Sobic010G165500 Sobic006G099700--Sobic010G165500 Sobic001G393500 Sobic001G393500 Sobic006G099700--Sobic001G393500 Sobic004G330700 Sobic004G330700 Sobic006G099700--Sobic004G330700 Sobic003G279300 Sobic003G279300 Sobic006G099700--Sobic003G279300 Sobic001G499300 Sobic001G499300 Sobic006G099700--Sobic001G499300 Sobic004G187900 Sobic004G187900 Sobic006G099700--Sobic004G187900 Sobic004G055200 Sobic004G055200 Sobic010G232100--Sobic004G055200 Sobic010G232100--Sobic008G025500 Sobic003G130800 Sobic003G130800 Sobic010G232100--Sobic003G130800 Sobic010G178200 Sobic010G178200 Sobic010G232100--Sobic010G178200 Sobic006G180200 Sobic006G180200 Sobic010G232100--Sobic006G180200 Sobic009G046600 Sobic009G046600 Sobic010G232100--Sobic009G046600 Sobic003G380000 Sobic003G380000 Sobic010G232100--Sobic003G380000 Sobic004G219300 Sobic004G219300 Sobic010G232100--Sobic004G219300 Sobic010G232100--Sobic006G099700 Sobic001G333600 Sobic001G333600 Sobic002G358800--Sobic001G333600 Sobic001G328200 Sobic001G328200 Sobic002G358800--Sobic001G328200 Sobic002G217700 Sobic002G217700 Sobic002G358800--Sobic002G217700 Sobic009G258100 Sobic009G258100 Sobic002G358800--Sobic009G258100 Sobic010G230500 Sobic010G230500 Sobic002G358800--Sobic010G230500 Sobic003G350800 Sobic003G350800 Sobic002G358800--Sobic003G350800 Sobic001G031600 Sobic001G031600 Sobic002G358800--Sobic001G031600 Sobic002G358400 Sobic002G358400 Sobic002G358800--Sobic002G358400 Sobic006G092400 Sobic006G092400 Sobic002G358800--Sobic006G092400 Sobic002G297700--Sobic001G031600 Sobic002G297700--Sobic002G358800 Sobic002G297700--Sobic010G232100 Sobic002G297700--Sobic009G258100 Sobic002G194100 Sobic002G194100 Sobic002G297700--Sobic002G194100 Sobic002G413000 Sobic002G413000 Sobic002G297700--Sobic002G413000 Sobic008G077600 Sobic008G077600 Sobic002G297700--Sobic008G077600 Sobic002G297700--Sobic003G380000 Sobic002G297700--Sobic002G358400 Sobic003G440300 Sobic003G440300 Sobic010G183600--Sobic003G440300 Sobic001G112900 Sobic001G112900 Sobic010G183600--Sobic001G112900 Sobic010G183600--Sobic009G016000 Sobic001G313000 Sobic001G313000 Sobic010G183600--Sobic001G313000 Sobic006G150800 Sobic006G150800 Sobic010G183600--Sobic006G150800 Sobic005G176100 Sobic005G176100 Sobic010G183600--Sobic005G176100 Sobic003G339200 Sobic003G339200 Sobic010G183600--Sobic003G339200 Sobic006G154800 Sobic006G154800 Sobic010G183600--Sobic006G154800 Sobic007G121300 Sobic007G121300 Sobic010G183600--Sobic007G121300 Sobic003G139500 Sobic003G139500 Sobic009G016000--Sobic003G139500 Sobic009G246300 Sobic009G246300 Sobic009G016000--Sobic009G246300 Sobic009G016000--Sobic010G183600 Sobic008G180800 Sobic008G180800 Sobic009G016000--Sobic008G180800 Sobic001G043000 Sobic001G043000 Sobic009G016000--Sobic001G043000 Sobic009G016000--Sobic007G121300 Sobic003G428600 Sobic003G428600 Sobic009G016000--Sobic003G428600 Sobic001G331600 Sobic001G331600 Sobic009G016000--Sobic001G331600 Sobic010G104700 Sobic010G104700 Sobic009G016000--Sobic010G104700 Sobic004G057200 Sobic004G057200 Sobic007G137600--Sobic004G057200 Sobic006G175900 Sobic006G175900 Sobic007G137600--Sobic006G175900 Sobic003G373500 Sobic003G373500 Sobic007G137600--Sobic003G373500 Sobic007G137600--Sobic002G358400 Sobic001G357300 Sobic001G357300 Sobic007G137600--Sobic001G357300 Sobic010G027000 Sobic010G027000 Sobic007G137600--Sobic010G027000 Sobic006G178000 Sobic006G178000 Sobic007G137600--Sobic006G178000 Sobic004G121300 Sobic004G121300 Sobic007G137600--Sobic004G121300 Sobic001G082000 Sobic001G082000 Sobic007G137600--Sobic001G082000 Sobic004G189200 Sobic004G189200 Sobic008G110300--Sobic004G189200 Sobic003G373600 Sobic003G373600 Sobic008G110300--Sobic003G373600 Sobic004G231900 Sobic004G231900 Sobic008G110300--Sobic004G231900 Sobic002G290400 Sobic002G290400 Sobic008G110300--Sobic002G290400 Sobic008G110300--Sobic010G230500 Sobic010G077100 Sobic010G077100 Sobic008G110300--Sobic010G077100 Sobic008G110300--Sobic007G121300 Sobic008G110300--Sobic009G258100 Sobic006G051800 Sobic006G051800 Sobic008G110300--Sobic006G051800
Octagon: transcription factors


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