Gene annotation
Transcriptome id Sobic.002G328550.1
Synonym -
Functional annotation -
UniProt A0A1W0W6K9
Pfam PF14259
Panther DB PTHR24012 PTHR24012:SF478
NCBI CDD -
KEGG Orthology K14411; RNA-binding protein Musashi
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13224 : RNA-binding (RRM/RBD/RNP motifs) family protein
RAP-DB (Rice) LOC_Os07g04570.1 : RNA recognition motif containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G244900 RIPER3 - Ripening-related family protein precursor, putative, expressed -
2 Sobic.003G067700 expressed protein -
3 Sobic.004G149466 - -
4 Sobic.003G331500 NHL25, putative, expressed -
5 Sobic.006G221700 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.003G002501 - -
7 Sobic.005G158700 - -
8 Sobic.004G017600 expressed protein -
9 Sobic.005G158801 - -
10 Sobic.004G286400 expressed protein -
11 Sobic.007G027800 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
12 Sobic.002G134900 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
13 Sobic.002G274100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.006G151001 - -
15 Sobic.009G208400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G041200 expressed protein -
17 Sobic.001G488000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.009G041100 expressed protein -
19 Sobic.002G308400 "MYB transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659858)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.002G046600 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8


Gene co-expression network
sample Sobic002G328550 Sobic002G328550 Sobic003G244900 Sobic003G244900 Sobic002G328550--Sobic003G244900 Sobic003G067700 Sobic003G067700 Sobic002G328550--Sobic003G067700 Sobic004G149466 Sobic004G149466 Sobic002G328550--Sobic004G149466 Sobic003G331500 Sobic003G331500 Sobic002G328550--Sobic003G331500 Sobic006G221700 Sobic006G221700 Sobic002G328550--Sobic006G221700 Sobic003G002501 Sobic003G002501 Sobic002G328550--Sobic003G002501 Sobic005G158700 Sobic005G158700 Sobic002G328550--Sobic005G158700 Sobic004G017600 Sobic004G017600 Sobic002G328550--Sobic004G017600 Sobic005G158801 Sobic005G158801 Sobic002G328550--Sobic005G158801 Sobic003G244900--Sobic002G328550 Sobic003G244900--Sobic004G149466 Sobic003G244900--Sobic003G067700 Sobic003G244900--Sobic005G158700 Sobic003G244900--Sobic006G221700 Sobic003G244900--Sobic004G017600 Sobic001G102150 Sobic001G102150 Sobic003G244900--Sobic001G102150 Sobic002G090100 Sobic002G090100 Sobic003G244900--Sobic002G090100 Sobic003G067800 Sobic003G067800 Sobic003G067700--Sobic003G067800 Sobic003G067700--Sobic003G244900 Sobic001G488000 Sobic001G488000 Sobic003G067700--Sobic001G488000 Sobic009G131400 Sobic009G131400 Sobic003G067700--Sobic009G131400 Sobic007G034600 Sobic007G034600 Sobic003G067700--Sobic007G034600 Sobic007G176600 Sobic007G176600 Sobic003G067700--Sobic007G176600 Sobic001G447100 Sobic001G447100 Sobic003G067700--Sobic001G447100 Sobic003G067700--Sobic003G002501 Sobic004G067900 Sobic004G067900 Sobic003G067700--Sobic004G067900 Sobic004G149466--Sobic006G221700 Sobic004G149466--Sobic003G244900 Sobic005G042300 Sobic005G042300 Sobic004G149466--Sobic005G042300 Sobic005G125800 Sobic005G125800 Sobic004G149466--Sobic005G125800 Sobic007G062700 Sobic007G062700 Sobic004G149466--Sobic007G062700 Sobic002G143700 Sobic002G143700 Sobic004G149466--Sobic002G143700 Sobic010G049800 Sobic010G049800 Sobic004G149466--Sobic010G049800 Sobic002G277432 Sobic002G277432 Sobic004G149466--Sobic002G277432 Sobic005G176500 Sobic005G176500 Sobic004G149466--Sobic005G176500 Sobic002G269300 Sobic002G269300 Sobic003G331500--Sobic002G269300 Sobic003G331600 Sobic003G331600 Sobic003G331500--Sobic003G331600 Sobic002G269400 Sobic002G269400 Sobic003G331500--Sobic002G269400 Sobic010G179800 Sobic010G179800 Sobic003G331500--Sobic010G179800 Sobic009G181400 Sobic009G181400 Sobic003G331500--Sobic009G181400 Sobic004G228100 Sobic004G228100 Sobic003G331500--Sobic004G228100 Sobic006G167800 Sobic006G167800 Sobic003G331500--Sobic006G167800 Sobic002G376000 Sobic002G376000 Sobic003G331500--Sobic002G376000 Sobic003G331500--Sobic002G328550 Sobic006G221700--Sobic004G149466 Sobic002G044100 Sobic002G044100 Sobic006G221700--Sobic002G044100 Sobic006G221700--Sobic003G002501 Sobic006G221700--Sobic003G244900 Sobic006G221700--Sobic003G067700 Sobic006G151001 Sobic006G151001 Sobic006G221700--Sobic006G151001 Sobic006G221700--Sobic010G049800 Sobic004G068000 Sobic004G068000 Sobic006G221700--Sobic004G068000 Sobic002G021132 Sobic002G021132 Sobic006G221700--Sobic002G021132 Sobic003G002501--Sobic002G044100 Sobic003G002501--Sobic006G221700 Sobic003G316350 Sobic003G316350 Sobic003G002501--Sobic003G316350 Sobic002G046600 Sobic002G046600 Sobic003G002501--Sobic002G046600 Sobic003G002501--Sobic003G067700 Sobic002G260800 Sobic002G260800 Sobic003G002501--Sobic002G260800 Sobic003G002501--Sobic007G034600 Sobic003G062200 Sobic003G062200 Sobic003G002501--Sobic003G062200 Sobic003G002501--Sobic006G151001 Sobic005G158700--Sobic005G158801 Sobic004G132800 Sobic004G132800 Sobic005G158700--Sobic004G132800 Sobic001G197300 Sobic001G197300 Sobic005G158700--Sobic001G197300 Sobic005G158700--Sobic003G244900 Sobic010G136400 Sobic010G136400 Sobic005G158700--Sobic010G136400 Sobic006G063400 Sobic006G063400 Sobic005G158700--Sobic006G063400 Sobic007G100032 Sobic007G100032 Sobic005G158700--Sobic007G100032 Sobic007G101900 Sobic007G101900 Sobic005G158700--Sobic007G101900 Sobic006G206500 Sobic006G206500 Sobic005G158700--Sobic006G206500 Sobic004G017600--Sobic005G158801 Sobic005G064200 Sobic005G064200 Sobic004G017600--Sobic005G064200 Sobic004G017600--Sobic006G206500 Sobic004G017600--Sobic003G244900 Sobic004G017600--Sobic005G158700 Sobic010G037200 Sobic010G037200 Sobic004G017600--Sobic010G037200 Sobic002G308400 Sobic002G308400 Sobic004G017600--Sobic002G308400 Sobic010G198800 Sobic010G198800 Sobic004G017600--Sobic010G198800 Sobic007G194100 Sobic007G194100 Sobic004G017600--Sobic007G194100 Sobic005G158801--Sobic006G206500 Sobic008G105200 Sobic008G105200 Sobic005G158801--Sobic008G105200 Sobic005G158801--Sobic005G158700 Sobic005G158801--Sobic004G132800 Sobic005G158801--Sobic010G037200 Sobic005G158801--Sobic002G308400 Sobic005G158801--Sobic007G194100 Sobic005G158801--Sobic005G064200 Sobic005G158801--Sobic004G017600
Octagon: transcription factors


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