Gene annotation
Transcriptome id Sobic.003G067700.1
Synonym Sb03g005750
Functional annotation expressed protein
UniProt C5XPC9
Pfam -
Panther DB PTHR33306 PTHR33306:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G06890 : -
RAP-DB (Rice) LOC_Os03g22360.1 : expressed protein
MaizeGDB (Corn) Zm00025a002399
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G067800 universal stress protein domain containing protein, putative, expressed -
2 Sobic.003G244900 RIPER3 - Ripening-related family protein precursor, putative, expressed -
3 Sobic.001G488000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.009G131400 basic 7S globulin precursor, putative, expressed -
5 Sobic.007G034600 U box protein 8, putative, expressed -
6 Sobic.007G176600 expressed protein -
7 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
8 Sobic.003G002501 - -
9 Sobic.004G067900 expressed protein -
10 Sobic.004G024200 similar to Bax inhibitor 1(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@transmembrane BAX inhibitor motif-containing protein, putative, expressed -
11 Sobic.009G224200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G295000 DUF584 domain containing protein, putative, expressed -
13 Sobic.001G052300 expressed protein -
14 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.002G328550 - K14411: RNA-binding protein Musashi
16 Sobic.006G221700 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.009G205100 zinc finger/CCCH transcription factor, putative, expressed -
18 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
19 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
20 Sobic.008G111500 membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G067700 Sobic003G067700 Sobic003G067800 Sobic003G067800 Sobic003G067700--Sobic003G067800 Sobic003G244900 Sobic003G244900 Sobic003G067700--Sobic003G244900 Sobic001G488000 Sobic001G488000 Sobic003G067700--Sobic001G488000 Sobic009G131400 Sobic009G131400 Sobic003G067700--Sobic009G131400 Sobic007G034600 Sobic007G034600 Sobic003G067700--Sobic007G034600 Sobic007G176600 Sobic007G176600 Sobic003G067700--Sobic007G176600 Sobic001G447100 Sobic001G447100 Sobic003G067700--Sobic001G447100 Sobic003G002501 Sobic003G002501 Sobic003G067700--Sobic003G002501 Sobic004G067900 Sobic004G067900 Sobic003G067700--Sobic004G067900 Sobic001G338600 Sobic001G338600 Sobic003G067800--Sobic001G338600 Sobic003G350700 Sobic003G350700 Sobic003G067800--Sobic003G350700 Sobic006G161400 Sobic006G161400 Sobic003G067800--Sobic006G161400 Sobic004G228900 Sobic004G228900 Sobic003G067800--Sobic004G228900 Sobic001G426000 Sobic001G426000 Sobic003G067800--Sobic001G426000 Sobic001G052300 Sobic001G052300 Sobic003G067800--Sobic001G052300 Sobic009G255500 Sobic009G255500 Sobic003G067800--Sobic009G255500 Sobic010G104300 Sobic010G104300 Sobic003G067800--Sobic010G104300 Sobic003G067800--Sobic003G067700 Sobic002G328550 Sobic002G328550 Sobic003G244900--Sobic002G328550 Sobic004G149466 Sobic004G149466 Sobic003G244900--Sobic004G149466 Sobic003G244900--Sobic003G067700 Sobic005G158700 Sobic005G158700 Sobic003G244900--Sobic005G158700 Sobic006G221700 Sobic006G221700 Sobic003G244900--Sobic006G221700 Sobic004G017600 Sobic004G017600 Sobic003G244900--Sobic004G017600 Sobic001G102150 Sobic001G102150 Sobic003G244900--Sobic001G102150 Sobic002G090100 Sobic002G090100 Sobic003G244900--Sobic002G090100 Sobic003G295000 Sobic003G295000 Sobic001G488000--Sobic003G295000 Sobic007G074200 Sobic007G074200 Sobic001G488000--Sobic007G074200 Sobic002G393600 Sobic002G393600 Sobic001G488000--Sobic002G393600 Sobic009G205100 Sobic009G205100 Sobic001G488000--Sobic009G205100 Sobic001G488000--Sobic001G447100 Sobic001G488000--Sobic003G067700 Sobic002G338250 Sobic002G338250 Sobic001G488000--Sobic002G338250 Sobic008G111500 Sobic008G111500 Sobic001G488000--Sobic008G111500 Sobic001G488000--Sobic009G131400 Sobic009G131400--Sobic008G111500 Sobic009G131400--Sobic007G074200 Sobic009G131400--Sobic001G447100 Sobic004G024200 Sobic004G024200 Sobic009G131400--Sobic004G024200 Sobic003G349700 Sobic003G349700 Sobic009G131400--Sobic003G349700 Sobic006G207100 Sobic006G207100 Sobic009G131400--Sobic006G207100 Sobic003G146400 Sobic003G146400 Sobic009G131400--Sobic003G146400 Sobic004G086400 Sobic004G086400 Sobic009G131400--Sobic004G086400 Sobic009G131400--Sobic007G176600 Sobic007G034600--Sobic004G067900 Sobic006G096300 Sobic006G096300 Sobic007G034600--Sobic006G096300 Sobic004G028800 Sobic004G028800 Sobic007G034600--Sobic004G028800 Sobic002G308400 Sobic002G308400 Sobic007G034600--Sobic002G308400 Sobic009G149800 Sobic009G149800 Sobic007G034600--Sobic009G149800 Sobic002G240800 Sobic002G240800 Sobic007G034600--Sobic002G240800 Sobic001G106400 Sobic001G106400 Sobic007G034600--Sobic001G106400 Sobic007G034600--Sobic003G067700 Sobic009G170800 Sobic009G170800 Sobic007G034600--Sobic009G170800 Sobic007G176600--Sobic001G447100 Sobic007G176600--Sobic003G349700 Sobic006G207000 Sobic006G207000 Sobic007G176600--Sobic006G207000 Sobic007G176600--Sobic006G207100 Sobic007G176600--Sobic004G024200 Sobic010G196600 Sobic010G196600 Sobic007G176600--Sobic010G196600 Sobic004G037000 Sobic004G037000 Sobic007G176600--Sobic004G037000 Sobic007G176600--Sobic004G086400 Sobic007G155200 Sobic007G155200 Sobic007G176600--Sobic007G155200 Sobic001G447100--Sobic003G349700 Sobic001G447100--Sobic004G024200 Sobic001G447100--Sobic007G176600 Sobic001G447100--Sobic008G111500 Sobic001G447100--Sobic007G074200 Sobic001G100600 Sobic001G100600 Sobic001G447100--Sobic001G100600 Sobic001G477300 Sobic001G477300 Sobic001G447100--Sobic001G477300 Sobic001G447100--Sobic009G131400 Sobic003G041200 Sobic003G041200 Sobic001G447100--Sobic003G041200 Sobic002G044100 Sobic002G044100 Sobic003G002501--Sobic002G044100 Sobic003G002501--Sobic006G221700 Sobic003G316350 Sobic003G316350 Sobic003G002501--Sobic003G316350 Sobic002G046600 Sobic002G046600 Sobic003G002501--Sobic002G046600 Sobic003G002501--Sobic003G067700 Sobic002G260800 Sobic002G260800 Sobic003G002501--Sobic002G260800 Sobic003G002501--Sobic007G034600 Sobic003G062200 Sobic003G062200 Sobic003G002501--Sobic003G062200 Sobic006G151001 Sobic006G151001 Sobic003G002501--Sobic006G151001 Sobic004G067900--Sobic002G308400 Sobic006G244500 Sobic006G244500 Sobic004G067900--Sobic006G244500 Sobic007G194100 Sobic007G194100 Sobic004G067900--Sobic007G194100 Sobic004G067900--Sobic003G062200 Sobic004G067900--Sobic003G295000 Sobic006G066600 Sobic006G066600 Sobic004G067900--Sobic006G066600 Sobic004G067900--Sobic002G240800 Sobic004G067900--Sobic007G034600 Sobic004G067900--Sobic001G106400
Octagon: transcription factors


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