Gene annotation
Transcriptome id Sobic.003G067800.1,Sobic.003G067800.3,Sobic.003G067800.2
Synonym Sb03g005760
Functional annotation universal stress protein domain containing protein, putative, expressed
UniProt A0A1B6Q1Q0 , A0A1B6Q1R7
Pfam PF00582
Panther DB PTHR31964 PTHR31964:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT2G47710 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os07g47620.1 : universal stress protein domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a023423 , Zm00025a025498
Brachypodium KQK14684 , PNT74583
Barley HORVU2Hr1G019500.10 , HORVU2Hr1G019500.7 , HORVU2Hr1G019500.9 , HORVU2Hr1G019500.8 , HORVU2Hr1G019500.6 , HORVU2Hr1G019500.5 , HORVU2Hr1G019500.4 , HORVU2Hr1G019500.3 , HORVU2Hr1G019500.2 , HORVU2Hr1G019500.1
Wheat TraesCS2A02G112400 , TraesCS2D02G112900 , TraesCS2A02G112500 , TraesCS2B02G131300 , TraesCS2D02G112300 , TraesCS2B02G131200
Populus -


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cDNA sequences
Sobic.003G067800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
2 Sobic.003G350700 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
3 Sobic.006G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein STI, putative, expressed K09553: stress-induced-phosphoprotein 1
4 Sobic.004G228900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
5 Sobic.001G426000 Up-reguralion under heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
6 Sobic.001G052300 expressed protein -
7 Sobic.009G255500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
8 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
9 Sobic.003G067700 expressed protein -
10 Sobic.002G278500 nodulin, putative, expressed -
11 Sobic.003G150400 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@homeodomain, putative, expressed -
12 Sobic.006G267000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
13 Sobic.004G199300 hypoxia-responsive family protein, putative, expressed -
14 Sobic.003G310700 mal d 1-associated protein, putative, expressed -
15 Sobic.007G176600 expressed protein -
16 Sobic.002G386000 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.003G323201 - -
19 Sobic.002G282300 expressed protein -
20 Sobic.001G101500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha


Gene co-expression network
sample Sobic003G067800 Sobic003G067800 Sobic001G338600 Sobic001G338600 Sobic003G067800--Sobic001G338600 Sobic003G350700 Sobic003G350700 Sobic003G067800--Sobic003G350700 Sobic006G161400 Sobic006G161400 Sobic003G067800--Sobic006G161400 Sobic004G228900 Sobic004G228900 Sobic003G067800--Sobic004G228900 Sobic001G426000 Sobic001G426000 Sobic003G067800--Sobic001G426000 Sobic001G052300 Sobic001G052300 Sobic003G067800--Sobic001G052300 Sobic009G255500 Sobic009G255500 Sobic003G067800--Sobic009G255500 Sobic010G104300 Sobic010G104300 Sobic003G067800--Sobic010G104300 Sobic003G067700 Sobic003G067700 Sobic003G067800--Sobic003G067700 Sobic002G282300 Sobic002G282300 Sobic001G338600--Sobic002G282300 Sobic002G278500 Sobic002G278500 Sobic001G338600--Sobic002G278500 Sobic001G338600--Sobic004G228900 Sobic001G338600--Sobic001G426000 Sobic001G205350 Sobic001G205350 Sobic001G338600--Sobic001G205350 Sobic006G230900 Sobic006G230900 Sobic001G338600--Sobic006G230900 Sobic003G144700 Sobic003G144700 Sobic001G338600--Sobic003G144700 Sobic001G441100 Sobic001G441100 Sobic001G338600--Sobic001G441100 Sobic004G283500 Sobic004G283500 Sobic001G338600--Sobic004G283500 Sobic003G350700--Sobic004G228900 Sobic009G231400 Sobic009G231400 Sobic003G350700--Sobic009G231400 Sobic003G350700--Sobic001G338600 Sobic005G122500 Sobic005G122500 Sobic003G350700--Sobic005G122500 Sobic003G350700--Sobic003G067800 Sobic003G350700--Sobic001G426000 Sobic003G350700--Sobic002G278500 Sobic009G163900 Sobic009G163900 Sobic003G350700--Sobic009G163900 Sobic010G234700 Sobic010G234700 Sobic003G350700--Sobic010G234700 Sobic006G161400--Sobic003G067800 Sobic006G161400--Sobic009G255500 Sobic003G150400 Sobic003G150400 Sobic006G161400--Sobic003G150400 Sobic007G180300 Sobic007G180300 Sobic006G161400--Sobic007G180300 Sobic002G248100 Sobic002G248100 Sobic006G161400--Sobic002G248100 Sobic006G161400--Sobic001G052300 Sobic001G101500 Sobic001G101500 Sobic006G161400--Sobic001G101500 Sobic006G161400--Sobic003G350700 Sobic010G105800 Sobic010G105800 Sobic006G161400--Sobic010G105800 Sobic004G228900--Sobic005G122500 Sobic004G228900--Sobic001G426000 Sobic004G228900--Sobic002G278500 Sobic004G228900--Sobic001G338600 Sobic004G228900--Sobic003G350700 Sobic004G249900 Sobic004G249900 Sobic004G228900--Sobic004G249900 Sobic003G310700 Sobic003G310700 Sobic004G228900--Sobic003G310700 Sobic004G228900--Sobic010G234700 Sobic004G228900--Sobic010G104300 Sobic001G426000--Sobic004G228900 Sobic009G169000 Sobic009G169000 Sobic001G426000--Sobic009G169000 Sobic001G426000--Sobic001G338600 Sobic010G196600 Sobic010G196600 Sobic001G426000--Sobic010G196600 Sobic001G426000--Sobic003G310700 Sobic001G320900 Sobic001G320900 Sobic001G426000--Sobic001G320900 Sobic001G426000--Sobic003G144700 Sobic001G426000--Sobic002G282300 Sobic001G426000--Sobic002G278500 Sobic001G052300--Sobic009G255500 Sobic006G165100 Sobic006G165100 Sobic001G052300--Sobic006G165100 Sobic003G324400 Sobic003G324400 Sobic001G052300--Sobic003G324400 Sobic005G037000 Sobic005G037000 Sobic001G052300--Sobic005G037000 Sobic009G183300 Sobic009G183300 Sobic001G052300--Sobic009G183300 Sobic002G036100 Sobic002G036100 Sobic001G052300--Sobic002G036100 Sobic001G077400 Sobic001G077400 Sobic001G052300--Sobic001G077400 Sobic009G217600 Sobic009G217600 Sobic001G052300--Sobic009G217600 Sobic001G052300--Sobic001G441100 Sobic008G177800 Sobic008G177800 Sobic009G255500--Sobic008G177800 Sobic009G255500--Sobic001G052300 Sobic009G255500--Sobic006G165100 Sobic009G255500--Sobic009G183300 Sobic002G294700 Sobic002G294700 Sobic009G255500--Sobic002G294700 Sobic009G255500--Sobic002G248100 Sobic009G255500--Sobic001G101500 Sobic009G255500--Sobic003G324400 Sobic010G234600 Sobic010G234600 Sobic009G255500--Sobic010G234600 Sobic009G194400 Sobic009G194400 Sobic010G104300--Sobic009G194400 Sobic001G495132 Sobic001G495132 Sobic010G104300--Sobic001G495132 Sobic002G388800 Sobic002G388800 Sobic010G104300--Sobic002G388800 Sobic004G092800 Sobic004G092800 Sobic010G104300--Sobic004G092800 Sobic002G269100 Sobic002G269100 Sobic010G104300--Sobic002G269100 Sobic001G425500 Sobic001G425500 Sobic010G104300--Sobic001G425500 Sobic004G295600 Sobic004G295600 Sobic010G104300--Sobic004G295600 Sobic010G104300--Sobic001G338600 Sobic001G440200 Sobic001G440200 Sobic010G104300--Sobic001G440200 Sobic003G067700--Sobic003G067800 Sobic003G244900 Sobic003G244900 Sobic003G067700--Sobic003G244900 Sobic001G488000 Sobic001G488000 Sobic003G067700--Sobic001G488000 Sobic009G131400 Sobic009G131400 Sobic003G067700--Sobic009G131400 Sobic007G034600 Sobic007G034600 Sobic003G067700--Sobic007G034600 Sobic007G176600 Sobic007G176600 Sobic003G067700--Sobic007G176600 Sobic001G447100 Sobic001G447100 Sobic003G067700--Sobic001G447100 Sobic003G002501 Sobic003G002501 Sobic003G067700--Sobic003G002501 Sobic004G067900 Sobic004G067900 Sobic003G067700--Sobic004G067900
Octagon: transcription factors


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