Gene annotation
Transcriptome id Sobic.009G205100.2
Synonym ATTZF1, ATCTH
Functional annotation zinc finger/CCCH transcription factor, putative, expressed
UniProt A0A1Z5R4P2
Pfam PF00642
Panther DB PTHR14493 PTHR14493:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25900 : Zinc finger C-x8-C-x5-C-x3-H type family protein
RAP-DB (Rice) LOC_Os05g45020.1 : zinc finger/CCCH transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a044298 , Zm00025a043179 , Zm00025a037994
Brachypodium KQK05294
Barley HORVU1Hr1G082100.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G205100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G247800 cold acclimation protein WCOR413, putative, expressed -
2 Sobic.001G076100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G488000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G353300 expressed protein -
5 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.008G118700 respiratory burst oxidase, putative, expressed -
7 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
8 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
9 Sobic.001G443800 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
10 Sobic.004G024200 similar to Bax inhibitor 1(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@transmembrane BAX inhibitor motif-containing protein, putative, expressed -
11 Sobic.001G201200 - -
12 Sobic.008G034300 expressed protein -
13 Sobic.003G146400 anther-specific protein SF18 precursor, putative, expressed -
14 Sobic.003G377100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
15 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
17 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
18 Sobic.001G371800 expressed protein -
19 Sobic.009G152600 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
20 Sobic.007G178000 heat shock protein DnaJ, putative, expressed -


Gene co-expression network
sample Sobic009G205100 Sobic009G205100 Sobic003G247800 Sobic003G247800 Sobic009G205100--Sobic003G247800 Sobic001G076100 Sobic001G076100 Sobic009G205100--Sobic001G076100 Sobic001G488000 Sobic001G488000 Sobic009G205100--Sobic001G488000 Sobic003G353300 Sobic003G353300 Sobic009G205100--Sobic003G353300 Sobic003G123600 Sobic003G123600 Sobic009G205100--Sobic003G123600 Sobic008G118700 Sobic008G118700 Sobic009G205100--Sobic008G118700 Sobic003G148600 Sobic003G148600 Sobic009G205100--Sobic003G148600 Sobic001G149800 Sobic001G149800 Sobic009G205100--Sobic001G149800 Sobic001G443800 Sobic001G443800 Sobic009G205100--Sobic001G443800 Sobic003G247800--Sobic009G205100 Sobic004G273300 Sobic004G273300 Sobic003G247800--Sobic004G273300 Sobic009G152600 Sobic009G152600 Sobic003G247800--Sobic009G152600 Sobic007G176600 Sobic007G176600 Sobic003G247800--Sobic007G176600 Sobic003G067800 Sobic003G067800 Sobic003G247800--Sobic003G067800 Sobic001G425600 Sobic001G425600 Sobic003G247800--Sobic001G425600 Sobic003G247800--Sobic008G118700 Sobic004G024200 Sobic004G024200 Sobic003G247800--Sobic004G024200 Sobic004G109700 Sobic004G109700 Sobic003G247800--Sobic004G109700 Sobic001G201200 Sobic001G201200 Sobic001G076100--Sobic001G201200 Sobic001G076100--Sobic001G443800 Sobic001G076100--Sobic003G123600 Sobic001G371800 Sobic001G371800 Sobic001G076100--Sobic001G371800 Sobic001G107800 Sobic001G107800 Sobic001G076100--Sobic001G107800 Sobic002G389000 Sobic002G389000 Sobic001G076100--Sobic002G389000 Sobic001G076100--Sobic003G148600 Sobic003G197200 Sobic003G197200 Sobic001G076100--Sobic003G197200 Sobic006G230600 Sobic006G230600 Sobic001G076100--Sobic006G230600 Sobic003G295000 Sobic003G295000 Sobic001G488000--Sobic003G295000 Sobic007G074200 Sobic007G074200 Sobic001G488000--Sobic007G074200 Sobic002G393600 Sobic002G393600 Sobic001G488000--Sobic002G393600 Sobic001G488000--Sobic009G205100 Sobic001G447100 Sobic001G447100 Sobic001G488000--Sobic001G447100 Sobic003G067700 Sobic003G067700 Sobic001G488000--Sobic003G067700 Sobic002G338250 Sobic002G338250 Sobic001G488000--Sobic002G338250 Sobic008G111500 Sobic008G111500 Sobic001G488000--Sobic008G111500 Sobic009G131400 Sobic009G131400 Sobic001G488000--Sobic009G131400 Sobic003G353300--Sobic008G118700 Sobic003G353300--Sobic009G152600 Sobic002G068600 Sobic002G068600 Sobic003G353300--Sobic002G068600 Sobic003G086600 Sobic003G086600 Sobic003G353300--Sobic003G086600 Sobic003G353300--Sobic001G149800 Sobic001G254100 Sobic001G254100 Sobic003G353300--Sobic001G254100 Sobic004G166200 Sobic004G166200 Sobic003G353300--Sobic004G166200 Sobic001G405500 Sobic001G405500 Sobic003G353300--Sobic001G405500 Sobic003G353300--Sobic001G201200 Sobic003G123600--Sobic003G148600 Sobic003G123600--Sobic001G107800 Sobic002G415600 Sobic002G415600 Sobic003G123600--Sobic002G415600 Sobic003G123600--Sobic003G197200 Sobic003G144700 Sobic003G144700 Sobic003G123600--Sobic003G144700 Sobic003G123600--Sobic001G076100 Sobic006G230800 Sobic006G230800 Sobic003G123600--Sobic006G230800 Sobic006G190500 Sobic006G190500 Sobic003G123600--Sobic006G190500 Sobic003G123600--Sobic001G443800 Sobic003G377100 Sobic003G377100 Sobic008G118700--Sobic003G377100 Sobic008G118700--Sobic002G068600 Sobic008G118700--Sobic001G107800 Sobic008G118700--Sobic001G201200 Sobic008G118700--Sobic001G254100 Sobic008G118700--Sobic001G149800 Sobic008G118700--Sobic001G371800 Sobic008G118700--Sobic003G148600 Sobic008G118700--Sobic003G353300 Sobic003G148600--Sobic003G197200 Sobic003G148600--Sobic003G123600 Sobic003G148600--Sobic003G144700 Sobic003G355100 Sobic003G355100 Sobic003G148600--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic003G148600--Sobic007G214600 Sobic003G148600--Sobic004G166200 Sobic003G148600--Sobic001G107800 Sobic003G148600--Sobic001G405500 Sobic003G394400 Sobic003G394400 Sobic003G148600--Sobic003G394400 Sobic010G032100 Sobic010G032100 Sobic001G149800--Sobic010G032100 Sobic001G149800--Sobic002G068600 Sobic010G031100 Sobic010G031100 Sobic001G149800--Sobic010G031100 Sobic001G149800--Sobic003G394400 Sobic001G149800--Sobic003G086600 Sobic001G149800--Sobic001G254100 Sobic001G149800--Sobic001G107800 Sobic001G481500 Sobic001G481500 Sobic001G149800--Sobic001G481500 Sobic001G309600 Sobic001G309600 Sobic001G149800--Sobic001G309600 Sobic001G443800--Sobic003G197200 Sobic001G443800--Sobic001G201200 Sobic001G443800--Sobic001G076100 Sobic001G443800--Sobic003G148600 Sobic001G443800--Sobic001G371800 Sobic010G198500 Sobic010G198500 Sobic001G443800--Sobic010G198500 Sobic001G443800--Sobic003G123600 Sobic001G443800--Sobic007G214600 Sobic006G190100 Sobic006G190100 Sobic001G443800--Sobic006G190100
Octagon: transcription factors


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