Gene annotation
Transcriptome id Sobic.003G002501.1
Synonym -
Functional annotation -
UniProt A0A1W0VV78
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G044100 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.006G221700 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.003G316350 - -
4 Sobic.002G046600 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
5 Sobic.003G067700 expressed protein -
6 Sobic.002G260800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
7 Sobic.007G034600 U box protein 8, putative, expressed -
8 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -
9 Sobic.006G151001 - -
10 Sobic.001G488000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.004G067900 expressed protein -
12 Sobic.006G206500 60S ribosomal protein L7, putative, expressed -
13 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
14 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
15 Sobic.003G244900 RIPER3 - Ripening-related family protein precursor, putative, expressed -
16 Sobic.002G308400 "MYB transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659858)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.004G149466 - -
18 Sobic.002G328550 - K14411: RNA-binding protein Musashi
19 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
20 Sobic.006G244500 nuclease PA3, putative, expressed -


Gene co-expression network
sample Sobic003G002501 Sobic003G002501 Sobic002G044100 Sobic002G044100 Sobic003G002501--Sobic002G044100 Sobic006G221700 Sobic006G221700 Sobic003G002501--Sobic006G221700 Sobic003G316350 Sobic003G316350 Sobic003G002501--Sobic003G316350 Sobic002G046600 Sobic002G046600 Sobic003G002501--Sobic002G046600 Sobic003G067700 Sobic003G067700 Sobic003G002501--Sobic003G067700 Sobic002G260800 Sobic002G260800 Sobic003G002501--Sobic002G260800 Sobic007G034600 Sobic007G034600 Sobic003G002501--Sobic007G034600 Sobic003G062200 Sobic003G062200 Sobic003G002501--Sobic003G062200 Sobic006G151001 Sobic006G151001 Sobic003G002501--Sobic006G151001 Sobic002G044100--Sobic006G221700 Sobic002G044100--Sobic003G002501 Sobic002G045000 Sobic002G045000 Sobic002G044100--Sobic002G045000 Sobic007G062700 Sobic007G062700 Sobic002G044100--Sobic007G062700 Sobic010G066500 Sobic010G066500 Sobic002G044100--Sobic010G066500 Sobic002G044100--Sobic006G151001 Sobic002G044100--Sobic003G062200 Sobic006G096200 Sobic006G096200 Sobic002G044100--Sobic006G096200 Sobic010G237100 Sobic010G237100 Sobic002G044100--Sobic010G237100 Sobic004G149466 Sobic004G149466 Sobic006G221700--Sobic004G149466 Sobic006G221700--Sobic002G044100 Sobic006G221700--Sobic003G002501 Sobic003G244900 Sobic003G244900 Sobic006G221700--Sobic003G244900 Sobic006G221700--Sobic003G067700 Sobic006G221700--Sobic006G151001 Sobic010G049800 Sobic010G049800 Sobic006G221700--Sobic010G049800 Sobic004G068000 Sobic004G068000 Sobic006G221700--Sobic004G068000 Sobic002G021132 Sobic002G021132 Sobic006G221700--Sobic002G021132 Sobic003G316350--Sobic003G062200 Sobic003G316350--Sobic006G151001 Sobic006G244500 Sobic006G244500 Sobic003G316350--Sobic006G244500 Sobic009G041100 Sobic009G041100 Sobic003G316350--Sobic009G041100 Sobic009G009800 Sobic009G009800 Sobic003G316350--Sobic009G009800 Sobic008G037000 Sobic008G037000 Sobic003G316350--Sobic008G037000 Sobic009G041200 Sobic009G041200 Sobic003G316350--Sobic009G041200 Sobic001G488200 Sobic001G488200 Sobic003G316350--Sobic001G488200 Sobic003G316350--Sobic006G096200 Sobic002G236900 Sobic002G236900 Sobic002G046600--Sobic002G236900 Sobic002G046600--Sobic002G260800 Sobic002G046600--Sobic006G244500 Sobic002G046600--Sobic001G488200 Sobic002G046600--Sobic003G062200 Sobic002G046600--Sobic009G009800 Sobic002G401566 Sobic002G401566 Sobic002G046600--Sobic002G401566 Sobic002G046600--Sobic008G037000 Sobic002G046600--Sobic003G002501 Sobic003G067800 Sobic003G067800 Sobic003G067700--Sobic003G067800 Sobic003G067700--Sobic003G244900 Sobic001G488000 Sobic001G488000 Sobic003G067700--Sobic001G488000 Sobic009G131400 Sobic009G131400 Sobic003G067700--Sobic009G131400 Sobic003G067700--Sobic007G034600 Sobic007G176600 Sobic007G176600 Sobic003G067700--Sobic007G176600 Sobic001G447100 Sobic001G447100 Sobic003G067700--Sobic001G447100 Sobic003G067700--Sobic003G002501 Sobic004G067900 Sobic004G067900 Sobic003G067700--Sobic004G067900 Sobic003G437300 Sobic003G437300 Sobic002G260800--Sobic003G437300 Sobic002G260800--Sobic002G046600 Sobic002G260800--Sobic001G488200 Sobic002G240800 Sobic002G240800 Sobic002G260800--Sobic002G240800 Sobic002G260800--Sobic006G244500 Sobic002G260800--Sobic004G067900 Sobic006G170400 Sobic006G170400 Sobic002G260800--Sobic006G170400 Sobic002G260800--Sobic003G002501 Sobic004G225800 Sobic004G225800 Sobic002G260800--Sobic004G225800 Sobic007G034600--Sobic004G067900 Sobic006G096300 Sobic006G096300 Sobic007G034600--Sobic006G096300 Sobic004G028800 Sobic004G028800 Sobic007G034600--Sobic004G028800 Sobic002G308400 Sobic002G308400 Sobic007G034600--Sobic002G308400 Sobic009G149800 Sobic009G149800 Sobic007G034600--Sobic009G149800 Sobic007G034600--Sobic002G240800 Sobic001G106400 Sobic001G106400 Sobic007G034600--Sobic001G106400 Sobic007G034600--Sobic003G067700 Sobic009G170800 Sobic009G170800 Sobic007G034600--Sobic009G170800 Sobic003G062200--Sobic006G244500 Sobic003G062200--Sobic009G009800 Sobic003G376000 Sobic003G376000 Sobic003G062200--Sobic003G376000 Sobic003G062200--Sobic008G037000 Sobic003G062200--Sobic006G151001 Sobic003G062200--Sobic006G096200 Sobic010G031600 Sobic010G031600 Sobic003G062200--Sobic010G031600 Sobic010G136300 Sobic010G136300 Sobic003G062200--Sobic010G136300 Sobic003G062200--Sobic009G041100 Sobic006G151001--Sobic009G041100 Sobic006G151001--Sobic003G376000 Sobic006G151001--Sobic008G037000 Sobic006G151001--Sobic003G062200 Sobic006G151001--Sobic006G096200 Sobic009G169650 Sobic009G169650 Sobic006G151001--Sobic009G169650 Sobic006G151001--Sobic006G244500 Sobic006G151001--Sobic009G009800 Sobic010G044600 Sobic010G044600 Sobic006G151001--Sobic010G044600
Octagon: transcription factors


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