Gene annotation
Transcriptome id Sobic.004G286400.1
Synonym
Functional annotation expressed protein
UniProt C6JRV1 , A0A194YS70
Pfam PF03087
Panther DB PTHR33070 PTHR33070:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76240 : Arabidopsis protein of unknown function (DUF241)
RAP-DB (Rice) LOC_Os02g44880.1 : expressed protein
MaizeGDB (Corn) Zm00025a010213 , Zm00025a021466 , Zm00025a051807
Brachypodium -
Barley HORVU7Hr1G119410.1
Wheat TraesCS7A02G546600 , TraesCS7B02G470400 , TraesCS7B02G469700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
2 Sobic.003G067700 expressed protein -
3 Sobic.007G034600 U box protein 8, putative, expressed -
4 Sobic.002G323900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PRAS-rich protein, putative, expressed -
5 Sobic.006G259000 AP2 domain containing protein, expressed K09286: EREBP-like factor
6 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
7 Sobic.010G071000 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.007G224300 RING finger protein, putative, expressed -
9 Sobic.007G118301 - -
10 Sobic.003G416500 SRC2 protein, putative, expressed -
11 Sobic.002G328550 - K14411: RNA-binding protein Musashi
12 Sobic.009G151900 expressed protein -
13 Sobic.003G331500 NHL25, putative, expressed -
14 Sobic.001G084000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY3, expressed -
15 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
16 Sobic.006G221101 - -
17 Sobic.006G257700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal transport/detoxification protein, putative, expressed -
18 Sobic.007G196400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
19 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin
20 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G286400 Sobic004G286400 Sobic002G138700 Sobic002G138700 Sobic004G286400--Sobic002G138700 Sobic003G067700 Sobic003G067700 Sobic004G286400--Sobic003G067700 Sobic007G034600 Sobic007G034600 Sobic004G286400--Sobic007G034600 Sobic002G323900 Sobic002G323900 Sobic004G286400--Sobic002G323900 Sobic006G259000 Sobic006G259000 Sobic004G286400--Sobic006G259000 Sobic009G010400 Sobic009G010400 Sobic004G286400--Sobic009G010400 Sobic010G071000 Sobic010G071000 Sobic004G286400--Sobic010G071000 Sobic007G224300 Sobic007G224300 Sobic004G286400--Sobic007G224300 Sobic007G118301 Sobic007G118301 Sobic004G286400--Sobic007G118301 Sobic002G138700--Sobic006G259000 Sobic001G084000 Sobic001G084000 Sobic002G138700--Sobic001G084000 Sobic007G090300 Sobic007G090300 Sobic002G138700--Sobic007G090300 Sobic004G086800 Sobic004G086800 Sobic002G138700--Sobic004G086800 Sobic010G102000 Sobic010G102000 Sobic002G138700--Sobic010G102000 Sobic001G195100 Sobic001G195100 Sobic002G138700--Sobic001G195100 Sobic003G416500 Sobic003G416500 Sobic002G138700--Sobic003G416500 Sobic002G138700--Sobic009G010400 Sobic001G287600 Sobic001G287600 Sobic002G138700--Sobic001G287600 Sobic003G067800 Sobic003G067800 Sobic003G067700--Sobic003G067800 Sobic003G244900 Sobic003G244900 Sobic003G067700--Sobic003G244900 Sobic001G488000 Sobic001G488000 Sobic003G067700--Sobic001G488000 Sobic009G131400 Sobic009G131400 Sobic003G067700--Sobic009G131400 Sobic003G067700--Sobic007G034600 Sobic007G176600 Sobic007G176600 Sobic003G067700--Sobic007G176600 Sobic001G447100 Sobic001G447100 Sobic003G067700--Sobic001G447100 Sobic003G002501 Sobic003G002501 Sobic003G067700--Sobic003G002501 Sobic004G067900 Sobic004G067900 Sobic003G067700--Sobic004G067900 Sobic007G034600--Sobic004G067900 Sobic006G096300 Sobic006G096300 Sobic007G034600--Sobic006G096300 Sobic004G028800 Sobic004G028800 Sobic007G034600--Sobic004G028800 Sobic002G308400 Sobic002G308400 Sobic007G034600--Sobic002G308400 Sobic009G149800 Sobic009G149800 Sobic007G034600--Sobic009G149800 Sobic002G240800 Sobic002G240800 Sobic007G034600--Sobic002G240800 Sobic001G106400 Sobic001G106400 Sobic007G034600--Sobic001G106400 Sobic007G034600--Sobic003G067700 Sobic009G170800 Sobic009G170800 Sobic007G034600--Sobic009G170800 Sobic002G323900--Sobic006G259000 Sobic002G323900--Sobic003G416500 Sobic007G077100 Sobic007G077100 Sobic002G323900--Sobic007G077100 Sobic001G489500 Sobic001G489500 Sobic002G323900--Sobic001G489500 Sobic010G023200 Sobic010G023200 Sobic002G323900--Sobic010G023200 Sobic002G323900--Sobic004G086800 Sobic002G269300 Sobic002G269300 Sobic002G323900--Sobic002G269300 Sobic001G064900 Sobic001G064900 Sobic002G323900--Sobic001G064900 Sobic002G323900--Sobic009G010400 Sobic006G259000--Sobic003G416500 Sobic006G259000--Sobic002G323900 Sobic006G259000--Sobic010G023200 Sobic006G259000--Sobic007G077100 Sobic010G105300 Sobic010G105300 Sobic006G259000--Sobic010G105300 Sobic006G259000--Sobic001G064900 Sobic006G259000--Sobic001G489500 Sobic006G259000--Sobic004G086800 Sobic009G217500 Sobic009G217500 Sobic006G259000--Sobic009G217500 Sobic009G010400--Sobic004G086800 Sobic004G065900 Sobic004G065900 Sobic009G010400--Sobic004G065900 Sobic009G010400--Sobic001G064900 Sobic009G100500 Sobic009G100500 Sobic009G010400--Sobic009G100500 Sobic006G257700 Sobic006G257700 Sobic009G010400--Sobic006G257700 Sobic009G010400--Sobic006G259000 Sobic001G095700 Sobic001G095700 Sobic009G010400--Sobic001G095700 Sobic009G010400--Sobic010G102000 Sobic004G006500 Sobic004G006500 Sobic009G010400--Sobic004G006500 Sobic010G071000--Sobic010G023200 Sobic010G071000--Sobic009G217500 Sobic010G071000--Sobic007G077100 Sobic002G232800 Sobic002G232800 Sobic010G071000--Sobic002G232800 Sobic007G077200 Sobic007G077200 Sobic010G071000--Sobic007G077200 Sobic010G071000--Sobic003G416500 Sobic003G341100 Sobic003G341100 Sobic010G071000--Sobic003G341100 Sobic001G341600 Sobic001G341600 Sobic010G071000--Sobic001G341600 Sobic010G209100 Sobic010G209100 Sobic010G071000--Sobic010G209100 Sobic006G094500 Sobic006G094500 Sobic007G224300--Sobic006G094500 Sobic007G139900 Sobic007G139900 Sobic007G224300--Sobic007G139900 Sobic008G051400 Sobic008G051400 Sobic007G224300--Sobic008G051400 Sobic007G224300--Sobic002G138700 Sobic009G187600 Sobic009G187600 Sobic007G224300--Sobic009G187600 Sobic009G171100 Sobic009G171100 Sobic007G224300--Sobic009G171100 Sobic004G018200 Sobic004G018200 Sobic007G224300--Sobic004G018200 Sobic010G178800 Sobic010G178800 Sobic007G224300--Sobic010G178800 Sobic001G525400 Sobic001G525400 Sobic007G224300--Sobic001G525400 Sobic001G100501 Sobic001G100501 Sobic007G118301--Sobic001G100501 Sobic009G136400 Sobic009G136400 Sobic007G118301--Sobic009G136400 Sobic007G118301--Sobic006G259000 Sobic007G118301--Sobic001G195100 Sobic003G207900 Sobic003G207900 Sobic007G118301--Sobic003G207900 Sobic006G216700 Sobic006G216700 Sobic007G118301--Sobic006G216700 Sobic001G295700 Sobic001G295700 Sobic007G118301--Sobic001G295700 Sobic007G118301--Sobic010G105300 Sobic003G230100 Sobic003G230100 Sobic007G118301--Sobic003G230100
Octagon: transcription factors


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