Gene annotation
Transcriptome id Sobic.002G356800.1
Synonym Sb02g037820
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XD22
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF117
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT3G26430 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os07g39750.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a048550
Brachypodium KQK15479 , KQK07359
Barley HORVU4Hr1G036310.1 , HORVU1Hr1G023510.2 , HORVU1Hr1G023510.1
Wheat TraesCS1D02G109200 , TraesCS2A02G192100 , TraesCS2A02G192100 , TraesCS1D02G109200 , TraesCS7B02G018200 , TraesCS7B02G018200 , TraesCS2B02G214000 , TraesCS2B02G214000 , TraesCS2B02G214000 , TraesCS1A02G105800 , TraesCS2D02G195400 , TraesCS2D02G195400 , TraesCS2D02G195400 , TraesCS1D02G109100 , TraesCS3A02G025400 , TraesCS1A02G105900 , TraesCS3D02G020600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G217500 expressed protein -
2 Sobic.001G154400 expp1 protein precursor, putative, expressed -
3 Sobic.004G318400 MTD1, putative, expressed -
4 Sobic.003G304500 expressed protein -
5 Sobic.009G144500 expressed protein -
6 Sobic.004G250600 NHL repeat-containing protein, putative, expressed -
7 Sobic.006G013900 RNA polymerase subunit, putative, expressed K03008: RPB11, DNA-directed RNA polymerase II subunit RPB11
8 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
9 Sobic.010G177100 expressed protein -
10 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
11 Sobic.006G267800 WD-40 repeat family protein, putative, expressed -
12 Sobic.003G240100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.006G072400 DUF584 domain containing protein, putative, expressed -
14 Sobic.009G026800 lectin protein kinase family protein, putative, expressed -
15 Sobic.004G036800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
16 Sobic.006G133700 transcription factor RF2a, putative, expressed -
17 Sobic.006G263400 uracil-DNA glycosylase, putative, expressed K03648: UNG, uracil-DNA glycosylase
18 Sobic.002G253900 growth regulator related protein, putative, expressed -
19 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G102100 DUF538 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G356800 Sobic002G356800 Sobic003G217500 Sobic003G217500 Sobic002G356800--Sobic003G217500 Sobic001G154400 Sobic001G154400 Sobic002G356800--Sobic001G154400 Sobic004G318400 Sobic004G318400 Sobic002G356800--Sobic004G318400 Sobic003G304500 Sobic003G304500 Sobic002G356800--Sobic003G304500 Sobic009G144500 Sobic009G144500 Sobic002G356800--Sobic009G144500 Sobic004G250600 Sobic004G250600 Sobic002G356800--Sobic004G250600 Sobic006G013900 Sobic006G013900 Sobic002G356800--Sobic006G013900 Sobic009G148000 Sobic009G148000 Sobic002G356800--Sobic009G148000 Sobic010G177100 Sobic010G177100 Sobic002G356800--Sobic010G177100 Sobic003G217500--Sobic004G250600 Sobic006G200901 Sobic006G200901 Sobic003G217500--Sobic006G200901 Sobic004G014100 Sobic004G014100 Sobic003G217500--Sobic004G014100 Sobic002G343000 Sobic002G343000 Sobic003G217500--Sobic002G343000 Sobic003G217500--Sobic009G148000 Sobic006G140300 Sobic006G140300 Sobic003G217500--Sobic006G140300 Sobic004G196800 Sobic004G196800 Sobic003G217500--Sobic004G196800 Sobic003G217500--Sobic003G304500 Sobic006G186300 Sobic006G186300 Sobic003G217500--Sobic006G186300 Sobic002G113500 Sobic002G113500 Sobic001G154400--Sobic002G113500 Sobic001G154400--Sobic006G013900 Sobic001G336050 Sobic001G336050 Sobic001G154400--Sobic001G336050 Sobic004G102900 Sobic004G102900 Sobic001G154400--Sobic004G102900 Sobic001G154400--Sobic004G318400 Sobic002G051200 Sobic002G051200 Sobic001G154400--Sobic002G051200 Sobic004G063500 Sobic004G063500 Sobic001G154400--Sobic004G063500 Sobic010G256200 Sobic010G256200 Sobic001G154400--Sobic010G256200 Sobic003G325700 Sobic003G325700 Sobic001G154400--Sobic003G325700 Sobic004G318400--Sobic004G102900 Sobic007G208200 Sobic007G208200 Sobic004G318400--Sobic007G208200 Sobic004G318400--Sobic003G304500 Sobic004G274500 Sobic004G274500 Sobic004G318400--Sobic004G274500 Sobic006G066600 Sobic006G066600 Sobic004G318400--Sobic006G066600 Sobic004G318400--Sobic004G196800 Sobic009G025100 Sobic009G025100 Sobic004G318400--Sobic009G025100 Sobic004G155300 Sobic004G155300 Sobic004G318400--Sobic004G155300 Sobic007G194100 Sobic007G194100 Sobic004G318400--Sobic007G194100 Sobic003G304500--Sobic009G025100 Sobic009G033500 Sobic009G033500 Sobic003G304500--Sobic009G033500 Sobic001G170500 Sobic001G170500 Sobic003G304500--Sobic001G170500 Sobic003G304500--Sobic004G274500 Sobic003G304500--Sobic004G196800 Sobic003G304500--Sobic004G155300 Sobic003G304500--Sobic004G318400 Sobic010G037200 Sobic010G037200 Sobic003G304500--Sobic010G037200 Sobic007G091200 Sobic007G091200 Sobic003G304500--Sobic007G091200 Sobic009G144500--Sobic003G304500 Sobic007G023600 Sobic007G023600 Sobic009G144500--Sobic007G023600 Sobic004G071050 Sobic004G071050 Sobic009G144500--Sobic004G071050 Sobic007G041200 Sobic007G041200 Sobic009G144500--Sobic007G041200 Sobic009G144500--Sobic009G033500 Sobic008G179800 Sobic008G179800 Sobic009G144500--Sobic008G179800 Sobic001G485200 Sobic001G485200 Sobic009G144500--Sobic001G485200 Sobic009G144500--Sobic004G250600 Sobic006G261200 Sobic006G261200 Sobic009G144500--Sobic006G261200 Sobic004G250600--Sobic007G023600 Sobic004G250600--Sobic006G261200 Sobic004G250600--Sobic003G217500 Sobic004G250600--Sobic001G170500 Sobic004G250600--Sobic003G304500 Sobic004G250600--Sobic006G186300 Sobic004G250600--Sobic008G179800 Sobic010G207400 Sobic010G207400 Sobic004G250600--Sobic010G207400 Sobic004G250600--Sobic009G025100 Sobic006G231700 Sobic006G231700 Sobic006G013900--Sobic006G231700 Sobic006G013900--Sobic002G051200 Sobic001G162800 Sobic001G162800 Sobic006G013900--Sobic001G162800 Sobic004G137900 Sobic004G137900 Sobic006G013900--Sobic004G137900 Sobic006G013900--Sobic001G154400 Sobic004G343600 Sobic004G343600 Sobic006G013900--Sobic004G343600 Sobic002G331300 Sobic002G331300 Sobic006G013900--Sobic002G331300 Sobic005G206700 Sobic005G206700 Sobic006G013900--Sobic005G206700 Sobic002G386300 Sobic002G386300 Sobic006G013900--Sobic002G386300 Sobic009G148000--Sobic002G343000 Sobic002G253900 Sobic002G253900 Sobic009G148000--Sobic002G253900 Sobic009G148000--Sobic006G200901 Sobic009G148000--Sobic006G186300 Sobic009G148000--Sobic003G217500 Sobic001G005800 Sobic001G005800 Sobic009G148000--Sobic001G005800 Sobic009G148000--Sobic004G014100 Sobic008G041900 Sobic008G041900 Sobic009G148000--Sobic008G041900 Sobic009G148000--Sobic004G250600 Sobic001G460100 Sobic001G460100 Sobic010G177100--Sobic001G460100 Sobic003G259300 Sobic003G259300 Sobic010G177100--Sobic003G259300 Sobic010G079100 Sobic010G079100 Sobic010G177100--Sobic010G079100 Sobic003G024000 Sobic003G024000 Sobic010G177100--Sobic003G024000 Sobic005G157300 Sobic005G157300 Sobic010G177100--Sobic005G157300 Sobic001G425700 Sobic001G425700 Sobic010G177100--Sobic001G425700 Sobic007G050800 Sobic007G050800 Sobic010G177100--Sobic007G050800 Sobic003G412800 Sobic003G412800 Sobic010G177100--Sobic003G412800 Sobic009G225500 Sobic009G225500 Sobic010G177100--Sobic009G225500
Octagon: transcription factors


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