Gene annotation
Transcriptome id Sobic.003G060600.1
Synonym Sb03g005200
Functional annotation expressed protein
UniProt C5XP68
Pfam -
Panther DB PTHR36331 PTHR36331:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G57540 : -
RAP-DB (Rice) LOC_Os01g14790.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G193850 - -
2 Sobic.002G282200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.009G013900 ankyrin repeat domain-containing protein 28, putative, expressed -
4 Sobic.008G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
5 Sobic.010G150450 - -
6 Sobic.004G017100 AGAP001222-PA, putative, expressed -
7 Sobic.001G149100 vegetative storage protein, putative, expressed -
8 Sobic.008G163400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
9 Sobic.003G128000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.003G239000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
11 Sobic.007G187400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
12 Sobic.003G112600 endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha
13 Sobic.003G299200 pentatricopeptide, putative, expressed -
14 Sobic.001G348100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@Acetoacetyl-CoA thiolase 2("PubMedID : 26759170,PubMedID : 24597475")@acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
15 Sobic.002G183300 GTP binding protein, putative, expressed -
16 Sobic.001G122200 zinc finger protein, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
17 Sobic.010G256000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.005G086900 - -
19 Sobic.002G251800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
20 Sobic.001G347100 tetratricopeptide-like helical, putative, expressed -


Gene co-expression network
sample Sobic003G060600 Sobic003G060600 Sobic009G193850 Sobic009G193850 Sobic003G060600--Sobic009G193850 Sobic002G282200 Sobic002G282200 Sobic003G060600--Sobic002G282200 Sobic009G013900 Sobic009G013900 Sobic003G060600--Sobic009G013900 Sobic008G099900 Sobic008G099900 Sobic003G060600--Sobic008G099900 Sobic010G150450 Sobic010G150450 Sobic003G060600--Sobic010G150450 Sobic004G017100 Sobic004G017100 Sobic003G060600--Sobic004G017100 Sobic001G149100 Sobic001G149100 Sobic003G060600--Sobic001G149100 Sobic008G163400 Sobic008G163400 Sobic003G060600--Sobic008G163400 Sobic003G128000 Sobic003G128000 Sobic003G060600--Sobic003G128000 Sobic001G041200 Sobic001G041200 Sobic009G193850--Sobic001G041200 Sobic004G011000 Sobic004G011000 Sobic009G193850--Sobic004G011000 Sobic006G216000 Sobic006G216000 Sobic009G193850--Sobic006G216000 Sobic007G162800 Sobic007G162800 Sobic009G193850--Sobic007G162800 Sobic002G148300 Sobic002G148300 Sobic009G193850--Sobic002G148300 Sobic001G404200 Sobic001G404200 Sobic009G193850--Sobic001G404200 Sobic003G118400 Sobic003G118400 Sobic009G193850--Sobic003G118400 Sobic008G080000 Sobic008G080000 Sobic009G193850--Sobic008G080000 Sobic006G242300 Sobic006G242300 Sobic009G193850--Sobic006G242300 Sobic005G088900 Sobic005G088900 Sobic002G282200--Sobic005G088900 Sobic001G235700 Sobic001G235700 Sobic002G282200--Sobic001G235700 Sobic009G191500 Sobic009G191500 Sobic002G282200--Sobic009G191500 Sobic003G310600 Sobic003G310600 Sobic002G282200--Sobic003G310600 Sobic007G092200 Sobic007G092200 Sobic002G282200--Sobic007G092200 Sobic008G113700 Sobic008G113700 Sobic002G282200--Sobic008G113700 Sobic003G336500 Sobic003G336500 Sobic002G282200--Sobic003G336500 Sobic004G082700 Sobic004G082700 Sobic002G282200--Sobic004G082700 Sobic003G436600 Sobic003G436600 Sobic002G282200--Sobic003G436600 Sobic005G164700 Sobic005G164700 Sobic009G013900--Sobic005G164700 Sobic001G230900 Sobic001G230900 Sobic009G013900--Sobic001G230900 Sobic009G026200 Sobic009G026200 Sobic009G013900--Sobic009G026200 Sobic001G040300 Sobic001G040300 Sobic009G013900--Sobic001G040300 Sobic008G136000 Sobic008G136000 Sobic009G013900--Sobic008G136000 Sobic009G213600 Sobic009G213600 Sobic009G013900--Sobic009G213600 Sobic007G187400 Sobic007G187400 Sobic009G013900--Sobic007G187400 Sobic010G060600 Sobic010G060600 Sobic009G013900--Sobic010G060600 Sobic008G133500 Sobic008G133500 Sobic009G013900--Sobic008G133500 Sobic005G210700 Sobic005G210700 Sobic008G099900--Sobic005G210700 Sobic006G085900 Sobic006G085900 Sobic008G099900--Sobic006G085900 Sobic009G155400 Sobic009G155400 Sobic008G099900--Sobic009G155400 Sobic002G251800 Sobic002G251800 Sobic008G099900--Sobic002G251800 Sobic004G217900 Sobic004G217900 Sobic008G099900--Sobic004G217900 Sobic006G109400 Sobic006G109400 Sobic008G099900--Sobic006G109400 Sobic009G116400 Sobic009G116400 Sobic008G099900--Sobic009G116400 Sobic007G179600 Sobic007G179600 Sobic008G099900--Sobic007G179600 Sobic006G271900 Sobic006G271900 Sobic008G099900--Sobic006G271900 Sobic005G211200 Sobic005G211200 Sobic010G150450--Sobic005G211200 Sobic010G150450--Sobic003G060600 Sobic002G319200 Sobic002G319200 Sobic010G150450--Sobic002G319200 Sobic010G224900 Sobic010G224900 Sobic010G150450--Sobic010G224900 Sobic010G150450--Sobic003G128000 Sobic005G110442 Sobic005G110442 Sobic010G150450--Sobic005G110442 Sobic002G045100 Sobic002G045100 Sobic010G150450--Sobic002G045100 Sobic001G230200 Sobic001G230200 Sobic010G150450--Sobic001G230200 Sobic010G150450--Sobic008G133500 Sobic001G081900 Sobic001G081900 Sobic004G017100--Sobic001G081900 Sobic010G144900 Sobic010G144900 Sobic004G017100--Sobic010G144900 Sobic009G211700 Sobic009G211700 Sobic004G017100--Sobic009G211700 Sobic004G017100--Sobic005G164700 Sobic003G290000 Sobic003G290000 Sobic004G017100--Sobic003G290000 Sobic001G112700 Sobic001G112700 Sobic004G017100--Sobic001G112700 Sobic004G017100--Sobic009G013900 Sobic001G150033 Sobic001G150033 Sobic004G017100--Sobic001G150033 Sobic009G224600 Sobic009G224600 Sobic004G017100--Sobic009G224600 Sobic001G347100 Sobic001G347100 Sobic001G149100--Sobic001G347100 Sobic003G299200 Sobic003G299200 Sobic001G149100--Sobic003G299200 Sobic010G252700 Sobic010G252700 Sobic001G149100--Sobic010G252700 Sobic008G179000 Sobic008G179000 Sobic001G149100--Sobic008G179000 Sobic004G241000 Sobic004G241000 Sobic001G149100--Sobic004G241000 Sobic001G149100--Sobic008G163400 Sobic003G239000 Sobic003G239000 Sobic001G149100--Sobic003G239000 Sobic006G069100 Sobic006G069100 Sobic001G149100--Sobic006G069100 Sobic002G267600 Sobic002G267600 Sobic001G149100--Sobic002G267600 Sobic008G163400--Sobic003G239000 Sobic008G163400--Sobic004G241000 Sobic008G163400--Sobic009G155400 Sobic008G163400--Sobic009G116400 Sobic004G256900 Sobic004G256900 Sobic008G163400--Sobic004G256900 Sobic006G262800 Sobic006G262800 Sobic008G163400--Sobic006G262800 Sobic001G122200 Sobic001G122200 Sobic008G163400--Sobic001G122200 Sobic008G163400--Sobic002G267600 Sobic008G163400--Sobic001G149100 Sobic001G392100 Sobic001G392100 Sobic003G128000--Sobic001G392100 Sobic003G128000--Sobic009G155400 Sobic001G009400 Sobic001G009400 Sobic003G128000--Sobic001G009400 Sobic003G128000--Sobic008G163400 Sobic003G128000--Sobic004G217900 Sobic003G128000--Sobic001G149100 Sobic003G128000--Sobic003G239000 Sobic003G128000--Sobic001G347100 Sobic001G254400 Sobic001G254400 Sobic003G128000--Sobic001G254400
Octagon: transcription factors


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