Gene annotation
Transcriptome id Sobic.010G150450.1
Synonym -
Functional annotation -
UniProt A0A1W0VT84
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G211200 seed maturation protein PM27, putative, expressed -
2 Sobic.003G060600 expressed protein -
3 Sobic.002G319200 expressed protein K11490: condensin-2 complex subunit H2
4 Sobic.010G224900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
5 Sobic.003G128000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.005G110442 - K00432: gpx, btuE, glutathione peroxidase
7 Sobic.002G045100 LSM domain containing protein, expressed K11086: SNRPB, small nuclear ribonucleoprotein B and B'
8 Sobic.001G230200 inosine triphosphate pyrophosphatase, putative, expressed K01519: inosine triphosphate pyrophosphatase
9 Sobic.008G133500 diaminopimelate epimerase, chloroplast precursor, putative, expressed K01778: diaminopimelate epimerase
10 Sobic.001G040300 expressed protein -
11 Sobic.009G211700 ZOS5-12 - C2H2 zinc finger protein, expressed -
12 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
13 Sobic.001G348100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@Acetoacetyl-CoA thiolase 2("PubMedID : 26759170,PubMedID : 24597475")@acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
14 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
15 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
16 Sobic.001G349500 ADP-ribosylation factor, putative, expressed K07952: ADP-ribosylation factor related protein 1
17 Sobic.003G181600 early-responsive to dehydration protein-related, putative, expressed -
18 Sobic.005G188200 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
19 Sobic.009G126500 methyltransferase, putative, expressed -
20 Sobic.009G013900 ankyrin repeat domain-containing protein 28, putative, expressed -


Gene co-expression network
sample Sobic010G150450 Sobic010G150450 Sobic005G211200 Sobic005G211200 Sobic010G150450--Sobic005G211200 Sobic003G060600 Sobic003G060600 Sobic010G150450--Sobic003G060600 Sobic002G319200 Sobic002G319200 Sobic010G150450--Sobic002G319200 Sobic010G224900 Sobic010G224900 Sobic010G150450--Sobic010G224900 Sobic003G128000 Sobic003G128000 Sobic010G150450--Sobic003G128000 Sobic005G110442 Sobic005G110442 Sobic010G150450--Sobic005G110442 Sobic002G045100 Sobic002G045100 Sobic010G150450--Sobic002G045100 Sobic001G230200 Sobic001G230200 Sobic010G150450--Sobic001G230200 Sobic008G133500 Sobic008G133500 Sobic010G150450--Sobic008G133500 Sobic005G211200--Sobic002G319200 Sobic009G165500 Sobic009G165500 Sobic005G211200--Sobic009G165500 Sobic001G040300 Sobic001G040300 Sobic005G211200--Sobic001G040300 Sobic006G052400 Sobic006G052400 Sobic005G211200--Sobic006G052400 Sobic001G505000 Sobic001G505000 Sobic005G211200--Sobic001G505000 Sobic008G135000 Sobic008G135000 Sobic005G211200--Sobic008G135000 Sobic008G058300 Sobic008G058300 Sobic005G211200--Sobic008G058300 Sobic009G126500 Sobic009G126500 Sobic005G211200--Sobic009G126500 Sobic005G211200--Sobic010G224900 Sobic009G193850 Sobic009G193850 Sobic003G060600--Sobic009G193850 Sobic002G282200 Sobic002G282200 Sobic003G060600--Sobic002G282200 Sobic009G013900 Sobic009G013900 Sobic003G060600--Sobic009G013900 Sobic008G099900 Sobic008G099900 Sobic003G060600--Sobic008G099900 Sobic003G060600--Sobic010G150450 Sobic004G017100 Sobic004G017100 Sobic003G060600--Sobic004G017100 Sobic001G149100 Sobic001G149100 Sobic003G060600--Sobic001G149100 Sobic008G163400 Sobic008G163400 Sobic003G060600--Sobic008G163400 Sobic003G060600--Sobic003G128000 Sobic002G319200--Sobic002G045100 Sobic001G242800 Sobic001G242800 Sobic002G319200--Sobic001G242800 Sobic001G371100 Sobic001G371100 Sobic002G319200--Sobic001G371100 Sobic002G319200--Sobic005G211200 Sobic010G032700 Sobic010G032700 Sobic002G319200--Sobic010G032700 Sobic001G528600 Sobic001G528600 Sobic002G319200--Sobic001G528600 Sobic004G152200 Sobic004G152200 Sobic002G319200--Sobic004G152200 Sobic002G319200--Sobic009G126500 Sobic002G161700 Sobic002G161700 Sobic002G319200--Sobic002G161700 Sobic003G151300 Sobic003G151300 Sobic010G224900--Sobic003G151300 Sobic001G107200 Sobic001G107200 Sobic010G224900--Sobic001G107200 Sobic004G006700 Sobic004G006700 Sobic010G224900--Sobic004G006700 Sobic009G026200 Sobic009G026200 Sobic010G224900--Sobic009G026200 Sobic010G224900--Sobic005G211200 Sobic002G348000 Sobic002G348000 Sobic010G224900--Sobic002G348000 Sobic001G215500 Sobic001G215500 Sobic010G224900--Sobic001G215500 Sobic010G224900--Sobic003G128000 Sobic001G069800 Sobic001G069800 Sobic010G224900--Sobic001G069800 Sobic001G392100 Sobic001G392100 Sobic003G128000--Sobic001G392100 Sobic009G155400 Sobic009G155400 Sobic003G128000--Sobic009G155400 Sobic001G009400 Sobic001G009400 Sobic003G128000--Sobic001G009400 Sobic003G128000--Sobic008G163400 Sobic004G217900 Sobic004G217900 Sobic003G128000--Sobic004G217900 Sobic003G128000--Sobic001G149100 Sobic003G239000 Sobic003G239000 Sobic003G128000--Sobic003G239000 Sobic001G347100 Sobic001G347100 Sobic003G128000--Sobic001G347100 Sobic001G254400 Sobic001G254400 Sobic003G128000--Sobic001G254400 Sobic006G104100 Sobic006G104100 Sobic005G110442--Sobic006G104100 Sobic009G151700 Sobic009G151700 Sobic005G110442--Sobic009G151700 Sobic003G386200 Sobic003G386200 Sobic005G110442--Sobic003G386200 Sobic006G038200 Sobic006G038200 Sobic005G110442--Sobic006G038200 Sobic010G144900 Sobic010G144900 Sobic005G110442--Sobic010G144900 Sobic008G174900 Sobic008G174900 Sobic005G110442--Sobic008G174900 Sobic001G112700 Sobic001G112700 Sobic005G110442--Sobic001G112700 Sobic007G191800 Sobic007G191800 Sobic005G110442--Sobic007G191800 Sobic002G333800 Sobic002G333800 Sobic005G110442--Sobic002G333800 Sobic007G143000 Sobic007G143000 Sobic002G045100--Sobic007G143000 Sobic005G164700 Sobic005G164700 Sobic002G045100--Sobic005G164700 Sobic009G012700 Sobic009G012700 Sobic002G045100--Sobic009G012700 Sobic002G045100--Sobic002G319200 Sobic003G160900 Sobic003G160900 Sobic002G045100--Sobic003G160900 Sobic007G034400 Sobic007G034400 Sobic002G045100--Sobic007G034400 Sobic004G002350 Sobic004G002350 Sobic002G045100--Sobic004G002350 Sobic010G018000 Sobic010G018000 Sobic002G045100--Sobic010G018000 Sobic002G045100--Sobic001G371100 Sobic003G407600 Sobic003G407600 Sobic001G230200--Sobic003G407600 Sobic009G211700 Sobic009G211700 Sobic001G230200--Sobic009G211700 Sobic010G247400 Sobic010G247400 Sobic001G230200--Sobic010G247400 Sobic006G056600 Sobic006G056600 Sobic001G230200--Sobic006G056600 Sobic003G196800 Sobic003G196800 Sobic001G230200--Sobic003G196800 Sobic003G407800 Sobic003G407800 Sobic001G230200--Sobic003G407800 Sobic001G091900 Sobic001G091900 Sobic001G230200--Sobic001G091900 Sobic001G401400 Sobic001G401400 Sobic001G230200--Sobic001G401400 Sobic005G027300 Sobic005G027300 Sobic001G230200--Sobic005G027300 Sobic008G185900 Sobic008G185900 Sobic008G133500--Sobic008G185900 Sobic004G177100 Sobic004G177100 Sobic008G133500--Sobic004G177100 Sobic006G179700 Sobic006G179700 Sobic008G133500--Sobic006G179700 Sobic008G133500--Sobic009G013900 Sobic006G242300 Sobic006G242300 Sobic008G133500--Sobic006G242300 Sobic008G171800 Sobic008G171800 Sobic008G133500--Sobic008G171800 Sobic006G177300 Sobic006G177300 Sobic008G133500--Sobic006G177300 Sobic001G041200 Sobic001G041200 Sobic008G133500--Sobic001G041200 Sobic008G133500--Sobic003G128000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.