Gene annotation
Transcriptome id Sobic.004G017100.6,Sobic.004G017100.7,Sobic.004G017100.5,Sobic.004G017100.4,Sobic.004G017100.1,Sobic.004G017100.2,Sobic.004G017100.3
Synonym Sb04g001620
Functional annotation AGAP001222-PA, putative, expressed
UniProt A0A1Z5RKG1 , C5XSZ2
Pfam PF10294
Panther DB PTHR14614 PTHR14614:SF2
NCBI CDD KOG2793; Putative N2,N2-dimethylguanosine tRNA methyltransferase KOG3201Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63855 : Putative methyltransferase family protein
RAP-DB (Rice) LOC_Os02g02800.1 : AGAP001222-PA, putative, expressed
MaizeGDB (Corn) Zm00025a018714
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G081900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00133: aspartate-semialdehyde dehydrogenase
2 Sobic.010G144900 fiber protein Fb34, putative, expressed -
3 Sobic.009G211700 ZOS5-12 - C2H2 zinc finger protein, expressed -
4 Sobic.005G164700 h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed K11128: GAR1, H/ACA ribonucleoprotein complex subunit 1
5 Sobic.003G290000 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
6 Sobic.001G112700 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II
7 Sobic.009G013900 ankyrin repeat domain-containing protein 28, putative, expressed -
8 Sobic.001G150033 - -
9 Sobic.009G224600 SNARE domain containing protein, putative, expressed K08506: syntaxin of plants SYP7
10 Sobic.001G250300 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
11 Sobic.001G077500 tumor necrosis factor superfamily, member 5-induced protein 1, putative, expressed K11876: PSMG2, proteasome assembly chaperone 2
12 Sobic.004G272200 secretory carrier-associated membrane protein, putative, expressed -
13 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
14 Sobic.009G001900 expressed protein -
15 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
16 Sobic.001G116800 zinc finger family protein, putative, expressed -
17 Sobic.008G132700 ATP-grasp domain containing protein, expressed K01648: ATP citrate (pro-S)-lyase
18 Sobic.003G124300 peroxiredoxin, putative, expressed -
19 Sobic.005G105550 - -
20 Sobic.003G060600 expressed protein -


Gene co-expression network
sample Sobic004G017100 Sobic004G017100 Sobic001G081900 Sobic001G081900 Sobic004G017100--Sobic001G081900 Sobic010G144900 Sobic010G144900 Sobic004G017100--Sobic010G144900 Sobic009G211700 Sobic009G211700 Sobic004G017100--Sobic009G211700 Sobic005G164700 Sobic005G164700 Sobic004G017100--Sobic005G164700 Sobic003G290000 Sobic003G290000 Sobic004G017100--Sobic003G290000 Sobic001G112700 Sobic001G112700 Sobic004G017100--Sobic001G112700 Sobic009G013900 Sobic009G013900 Sobic004G017100--Sobic009G013900 Sobic001G150033 Sobic001G150033 Sobic004G017100--Sobic001G150033 Sobic009G224600 Sobic009G224600 Sobic004G017100--Sobic009G224600 Sobic001G371100 Sobic001G371100 Sobic001G081900--Sobic001G371100 Sobic001G397000 Sobic001G397000 Sobic001G081900--Sobic001G397000 Sobic010G125100 Sobic010G125100 Sobic001G081900--Sobic010G125100 Sobic007G079600 Sobic007G079600 Sobic001G081900--Sobic007G079600 Sobic001G081900--Sobic010G144900 Sobic002G101000 Sobic002G101000 Sobic001G081900--Sobic002G101000 Sobic002G304400 Sobic002G304400 Sobic001G081900--Sobic002G304400 Sobic007G171200 Sobic007G171200 Sobic001G081900--Sobic007G171200 Sobic010G032700 Sobic010G032700 Sobic001G081900--Sobic010G032700 Sobic009G189200 Sobic009G189200 Sobic010G144900--Sobic009G189200 Sobic006G104100 Sobic006G104100 Sobic010G144900--Sobic006G104100 Sobic010G144900--Sobic001G397000 Sobic006G120700 Sobic006G120700 Sobic010G144900--Sobic006G120700 Sobic009G059500 Sobic009G059500 Sobic010G144900--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic010G144900--Sobic002G186900 Sobic007G044400 Sobic007G044400 Sobic010G144900--Sobic007G044400 Sobic002G236700 Sobic002G236700 Sobic010G144900--Sobic002G236700 Sobic010G144900--Sobic001G371100 Sobic003G160900 Sobic003G160900 Sobic009G211700--Sobic003G160900 Sobic001G091900 Sobic001G091900 Sobic009G211700--Sobic001G091900 Sobic009G211700--Sobic001G371100 Sobic009G040500 Sobic009G040500 Sobic009G211700--Sobic009G040500 Sobic005G027300 Sobic005G027300 Sobic009G211700--Sobic005G027300 Sobic003G198300 Sobic003G198300 Sobic009G211700--Sobic003G198300 Sobic004G326600 Sobic004G326600 Sobic009G211700--Sobic004G326600 Sobic006G098500 Sobic006G098500 Sobic009G211700--Sobic006G098500 Sobic001G230200 Sobic001G230200 Sobic009G211700--Sobic001G230200 Sobic007G034400 Sobic007G034400 Sobic005G164700--Sobic007G034400 Sobic002G115000 Sobic002G115000 Sobic005G164700--Sobic002G115000 Sobic006G201500 Sobic006G201500 Sobic005G164700--Sobic006G201500 Sobic002G045100 Sobic002G045100 Sobic005G164700--Sobic002G045100 Sobic008G135000 Sobic008G135000 Sobic005G164700--Sobic008G135000 Sobic001G085400 Sobic001G085400 Sobic005G164700--Sobic001G085400 Sobic008G021100 Sobic008G021100 Sobic005G164700--Sobic008G021100 Sobic001G058900 Sobic001G058900 Sobic005G164700--Sobic001G058900 Sobic006G156000 Sobic006G156000 Sobic005G164700--Sobic006G156000 Sobic003G219800 Sobic003G219800 Sobic003G290000--Sobic003G219800 Sobic007G186100 Sobic007G186100 Sobic003G290000--Sobic007G186100 Sobic002G320800 Sobic002G320800 Sobic003G290000--Sobic002G320800 Sobic003G443300 Sobic003G443300 Sobic003G290000--Sobic003G443300 Sobic006G216600 Sobic006G216600 Sobic003G290000--Sobic006G216600 Sobic003G290000--Sobic006G156000 Sobic003G290000--Sobic010G144900 Sobic009G212400 Sobic009G212400 Sobic003G290000--Sobic009G212400 Sobic001G007600 Sobic001G007600 Sobic003G290000--Sobic001G007600 Sobic002G392800 Sobic002G392800 Sobic001G112700--Sobic002G392800 Sobic001G242800 Sobic001G242800 Sobic001G112700--Sobic001G242800 Sobic002G353000 Sobic002G353000 Sobic001G112700--Sobic002G353000 Sobic006G002700 Sobic006G002700 Sobic001G112700--Sobic006G002700 Sobic001G096100 Sobic001G096100 Sobic001G112700--Sobic001G096100 Sobic002G309400 Sobic002G309400 Sobic001G112700--Sobic002G309400 Sobic001G112700--Sobic003G290000 Sobic009G126500 Sobic009G126500 Sobic001G112700--Sobic009G126500 Sobic010G060600 Sobic010G060600 Sobic001G112700--Sobic010G060600 Sobic009G013900--Sobic005G164700 Sobic001G230900 Sobic001G230900 Sobic009G013900--Sobic001G230900 Sobic009G026200 Sobic009G026200 Sobic009G013900--Sobic009G026200 Sobic001G040300 Sobic001G040300 Sobic009G013900--Sobic001G040300 Sobic008G136000 Sobic008G136000 Sobic009G013900--Sobic008G136000 Sobic009G213600 Sobic009G213600 Sobic009G013900--Sobic009G213600 Sobic007G187400 Sobic007G187400 Sobic009G013900--Sobic007G187400 Sobic009G013900--Sobic010G060600 Sobic008G133500 Sobic008G133500 Sobic009G013900--Sobic008G133500 Sobic001G412500 Sobic001G412500 Sobic001G150033--Sobic001G412500 Sobic001G442700 Sobic001G442700 Sobic001G150033--Sobic001G442700 Sobic002G267600 Sobic002G267600 Sobic001G150033--Sobic002G267600 Sobic001G282000 Sobic001G282000 Sobic001G150033--Sobic001G282000 Sobic006G029400 Sobic006G029400 Sobic001G150033--Sobic006G029400 Sobic001G116000 Sobic001G116000 Sobic001G150033--Sobic001G116000 Sobic010G168900 Sobic010G168900 Sobic001G150033--Sobic010G168900 Sobic003G084300 Sobic003G084300 Sobic001G150033--Sobic003G084300 Sobic001G150033--Sobic009G189200 Sobic009G224600--Sobic010G144900 Sobic009G224600--Sobic003G084300 Sobic010G217100 Sobic010G217100 Sobic009G224600--Sobic010G217100 Sobic009G224600--Sobic009G189200 Sobic009G224600--Sobic001G412500 Sobic009G124200 Sobic009G124200 Sobic009G224600--Sobic009G124200 Sobic006G094100 Sobic006G094100 Sobic009G224600--Sobic006G094100 Sobic009G165500 Sobic009G165500 Sobic009G224600--Sobic009G165500 Sobic001G418000 Sobic001G418000 Sobic009G224600--Sobic001G418000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.