Gene annotation
Transcriptome id Sobic.001G077500.2
Synonym Sb01g007010
Functional annotation tumor necrosis factor superfamily, member 5-induced protein 1, putative, expressed
UniProt A0A1Z5S4Q8
Pfam PF09754
Panther DB PTHR12970
NCBI CDD KOG3112; Uncharacterized conserved protein
KEGG Orthology K11876; PSMG2, proteasome assembly chaperone 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18940 : clast3-related
RAP-DB (Rice) LOC_Os03g55784.1 : tumor necrosis factor superfamily, member 5-induced protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a008314
Brachypodium KQK13017 , KQK13018 , KQK13019
Barley HORVU5Hr1G098040.2 , HORVU5Hr1G098040.3 , HORVU5Hr1G098040.1 , HORVU5Hr1G098040.4
Wheat TraesCS5A02G403100 , TraesCS5D02G413100 , TraesCS5A02G403100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G396600 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS5-12 - C2H2 zinc finger protein, expressed -
2 Sobic.005G080900 expressed protein -
3 Sobic.002G159900 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
4 Sobic.009G191200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
5 Sobic.006G138100 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
6 Sobic.002G361700 expressed protein -
7 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
8 Sobic.001G334300 - K02966: RP-S19e, small subunit ribosomal protein S19e
9 Sobic.006G216600 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
10 Sobic.002G393400 chaperonin, putative, expressed K04078: groES, chaperonin GroES
11 Sobic.004G055700 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
12 Sobic.009G233400 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
13 Sobic.002G056200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
14 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
15 Sobic.008G130400 prefoldin, putative, expressed -
16 Sobic.001G018200 prohibitin-2, putative, expressed K17081: prohibitin 2
17 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
18 Sobic.004G252100 ribosomal protein L7Ae, putative, expressed K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2
19 Sobic.008G132700 ATP-grasp domain containing protein, expressed K01648: ATP citrate (pro-S)-lyase
20 Sobic.001G085400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae


Gene co-expression network
sample Sobic001G077500 Sobic001G077500 Sobic003G396600 Sobic003G396600 Sobic001G077500--Sobic003G396600 Sobic005G080900 Sobic005G080900 Sobic001G077500--Sobic005G080900 Sobic002G159900 Sobic002G159900 Sobic001G077500--Sobic002G159900 Sobic009G191200 Sobic009G191200 Sobic001G077500--Sobic009G191200 Sobic006G138100 Sobic006G138100 Sobic001G077500--Sobic006G138100 Sobic002G361700 Sobic002G361700 Sobic001G077500--Sobic002G361700 Sobic010G028200 Sobic010G028200 Sobic001G077500--Sobic010G028200 Sobic001G334300 Sobic001G334300 Sobic001G077500--Sobic001G334300 Sobic006G216600 Sobic006G216600 Sobic001G077500--Sobic006G216600 Sobic006G200000 Sobic006G200000 Sobic003G396600--Sobic006G200000 Sobic004G349700 Sobic004G349700 Sobic003G396600--Sobic004G349700 Sobic003G011100 Sobic003G011100 Sobic003G396600--Sobic003G011100 Sobic003G396600--Sobic005G080900 Sobic010G115200 Sobic010G115200 Sobic003G396600--Sobic010G115200 Sobic009G088200 Sobic009G088200 Sobic003G396600--Sobic009G088200 Sobic002G101000 Sobic002G101000 Sobic003G396600--Sobic002G101000 Sobic010G069400 Sobic010G069400 Sobic003G396600--Sobic010G069400 Sobic001G397000 Sobic001G397000 Sobic003G396600--Sobic001G397000 Sobic003G436700 Sobic003G436700 Sobic005G080900--Sobic003G436700 Sobic003G109600 Sobic003G109600 Sobic005G080900--Sobic003G109600 Sobic004G252100 Sobic004G252100 Sobic005G080900--Sobic004G252100 Sobic002G379500 Sobic002G379500 Sobic005G080900--Sobic002G379500 Sobic006G067800 Sobic006G067800 Sobic005G080900--Sobic006G067800 Sobic009G101700 Sobic009G101700 Sobic005G080900--Sobic009G101700 Sobic006G261900 Sobic006G261900 Sobic005G080900--Sobic006G261900 Sobic001G016500 Sobic001G016500 Sobic005G080900--Sobic001G016500 Sobic002G286900 Sobic002G286900 Sobic005G080900--Sobic002G286900 Sobic010G089500 Sobic010G089500 Sobic002G159900--Sobic010G089500 Sobic004G056400 Sobic004G056400 Sobic002G159900--Sobic004G056400 Sobic002G186900 Sobic002G186900 Sobic002G159900--Sobic002G186900 Sobic001G418000 Sobic001G418000 Sobic002G159900--Sobic001G418000 Sobic003G096000 Sobic003G096000 Sobic002G159900--Sobic003G096000 Sobic001G410200 Sobic001G410200 Sobic002G159900--Sobic001G410200 Sobic001G173300 Sobic001G173300 Sobic002G159900--Sobic001G173300 Sobic004G297300 Sobic004G297300 Sobic002G159900--Sobic004G297300 Sobic010G065900 Sobic010G065900 Sobic002G159900--Sobic010G065900 Sobic009G233400 Sobic009G233400 Sobic009G191200--Sobic009G233400 Sobic008G135000 Sobic008G135000 Sobic009G191200--Sobic008G135000 Sobic009G191200--Sobic001G334300 Sobic001G058900 Sobic001G058900 Sobic009G191200--Sobic001G058900 Sobic002G115000 Sobic002G115000 Sobic009G191200--Sobic002G115000 Sobic002G049300 Sobic002G049300 Sobic009G191200--Sobic002G049300 Sobic003G280700 Sobic003G280700 Sobic009G191200--Sobic003G280700 Sobic001G085400 Sobic001G085400 Sobic009G191200--Sobic001G085400 Sobic002G304900 Sobic002G304900 Sobic009G191200--Sobic002G304900 Sobic001G436200 Sobic001G436200 Sobic006G138100--Sobic001G436200 Sobic002G047600 Sobic002G047600 Sobic006G138100--Sobic002G047600 Sobic006G138100--Sobic002G379500 Sobic007G019000 Sobic007G019000 Sobic006G138100--Sobic007G019000 Sobic006G137100 Sobic006G137100 Sobic006G138100--Sobic006G137100 Sobic004G008400 Sobic004G008400 Sobic006G138100--Sobic004G008400 Sobic006G138100--Sobic003G109600 Sobic009G050300 Sobic009G050300 Sobic006G138100--Sobic009G050300 Sobic006G116700 Sobic006G116700 Sobic006G138100--Sobic006G116700 Sobic006G156000 Sobic006G156000 Sobic002G361700--Sobic006G156000 Sobic001G418900 Sobic001G418900 Sobic002G361700--Sobic001G418900 Sobic004G212300 Sobic004G212300 Sobic002G361700--Sobic004G212300 Sobic002G257300 Sobic002G257300 Sobic002G361700--Sobic002G257300 Sobic003G443300 Sobic003G443300 Sobic002G361700--Sobic003G443300 Sobic009G238900 Sobic009G238900 Sobic002G361700--Sobic009G238900 Sobic003G219800 Sobic003G219800 Sobic002G361700--Sobic003G219800 Sobic004G138800 Sobic004G138800 Sobic002G361700--Sobic004G138800 Sobic001G505500 Sobic001G505500 Sobic002G361700--Sobic001G505500 Sobic003G209000 Sobic003G209000 Sobic010G028200--Sobic003G209000 Sobic010G028200--Sobic010G065900 Sobic002G418400 Sobic002G418400 Sobic010G028200--Sobic002G418400 Sobic001G404800 Sobic001G404800 Sobic010G028200--Sobic001G404800 Sobic010G028200--Sobic003G436700 Sobic004G055700 Sobic004G055700 Sobic010G028200--Sobic004G055700 Sobic003G160700 Sobic003G160700 Sobic010G028200--Sobic003G160700 Sobic010G028200--Sobic004G008400 Sobic002G136700 Sobic002G136700 Sobic010G028200--Sobic002G136700 Sobic001G334300--Sobic009G233400 Sobic001G334300--Sobic002G304900 Sobic003G387900 Sobic003G387900 Sobic001G334300--Sobic003G387900 Sobic009G144300 Sobic009G144300 Sobic001G334300--Sobic009G144300 Sobic001G334300--Sobic001G085400 Sobic009G179100 Sobic009G179100 Sobic001G334300--Sobic009G179100 Sobic009G227400 Sobic009G227400 Sobic001G334300--Sobic009G227400 Sobic005G050500 Sobic005G050500 Sobic001G334300--Sobic005G050500 Sobic001G334300--Sobic002G049300 Sobic006G216600--Sobic001G085400 Sobic006G216600--Sobic003G387900 Sobic006G216600--Sobic002G304900 Sobic001G057300 Sobic001G057300 Sobic006G216600--Sobic001G057300 Sobic006G216600--Sobic002G049300 Sobic006G216600--Sobic009G144300 Sobic006G216600--Sobic002G115000 Sobic006G216600--Sobic002G047600 Sobic003G363800 Sobic003G363800 Sobic006G216600--Sobic003G363800
Octagon: transcription factors


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