Gene annotation
Transcriptome id Sobic.003G064700.1
Synonym Sb03g005520
Functional annotation expressed protein
UniProt A0A1B6Q1N1
Pfam -
Panther DB PTHR34121 PTHR34121:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13560 : -
RAP-DB (Rice) LOC_Os05g06980.1 : expressed protein
MaizeGDB (Corn) Zm00025a042938 , Zm00025a023373
Brachypodium KQK02250 , KQK02251 , PNT75564 , KQK07347 , KQK02249
Barley HORVU3Hr1G024990.3 , HORVU3Hr1G024990.2 , HORVU3Hr1G024990.5 , HORVU3Hr1G024990.4 , HORVU3Hr1G024990.6
Wheat TraesCS1A02G108300 , TraesCS1A02G108300 , TraesCS1D02G110700 , TraesCS1D02G110700 , TraesCS1B02G130500 , TraesCS3A02G308300 , TraesCS3D02G134100 , TraesCS3B02G151400
Populus -


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cDNA sequences
Sobic.003G064700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G264600 GRAM domain containing protein, expressed -
2 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
3 Sobic.001G214600 expressed protein -
4 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
5 Sobic.004G236800 MAG2, putative, expressed -
6 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
7 Sobic.001G393700 expressed protein -
8 Sobic.003G152400 WD domain containing protein, putative, expressed K17601: WD repeat-containing protein 81
9 Sobic.002G308500 peptide-Nasparagine amidase, putative, expressed K01456: E3.5.1.52, NGLY1, peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
10 Sobic.003G194500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
11 Sobic.002G283400 - -
12 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
13 Sobic.010G223100 PAP/25A associated domain containing protein, putative, expressed -
14 Sobic.006G037700 phosphoribulokinase/Uridine kinase family protein, expressed -
15 Sobic.004G023100 protein binding protein, putative, expressed -
16 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
17 Sobic.010G139500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
18 Sobic.004G017300 adaptor complexes medium subunit family domain containing protein, expressed K12398: AP-3 complex subunit mu
19 Sobic.010G185400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
20 Sobic.004G204100 expressed protein -


Gene co-expression network
sample Sobic003G064700 Sobic003G064700 Sobic002G264600 Sobic002G264600 Sobic003G064700--Sobic002G264600 Sobic003G405500 Sobic003G405500 Sobic003G064700--Sobic003G405500 Sobic001G214600 Sobic001G214600 Sobic003G064700--Sobic001G214600 Sobic003G189600 Sobic003G189600 Sobic003G064700--Sobic003G189600 Sobic004G236800 Sobic004G236800 Sobic003G064700--Sobic004G236800 Sobic007G120500 Sobic007G120500 Sobic003G064700--Sobic007G120500 Sobic001G393700 Sobic001G393700 Sobic003G064700--Sobic001G393700 Sobic003G152400 Sobic003G152400 Sobic003G064700--Sobic003G152400 Sobic002G308500 Sobic002G308500 Sobic003G064700--Sobic002G308500 Sobic004G345400 Sobic004G345400 Sobic002G264600--Sobic004G345400 Sobic002G164300 Sobic002G164300 Sobic002G264600--Sobic002G164300 Sobic003G398400 Sobic003G398400 Sobic002G264600--Sobic003G398400 Sobic010G185400 Sobic010G185400 Sobic002G264600--Sobic010G185400 Sobic008G149800 Sobic008G149800 Sobic002G264600--Sobic008G149800 Sobic002G357700 Sobic002G357700 Sobic002G264600--Sobic002G357700 Sobic001G313400 Sobic001G313400 Sobic002G264600--Sobic001G313400 Sobic002G264600--Sobic003G064700 Sobic002G264600--Sobic003G189600 Sobic001G145400 Sobic001G145400 Sobic003G405500--Sobic001G145400 Sobic008G124800 Sobic008G124800 Sobic003G405500--Sobic008G124800 Sobic002G430300 Sobic002G430300 Sobic003G405500--Sobic002G430300 Sobic009G084900 Sobic009G084900 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic004G141800 Sobic004G141800 Sobic003G405500--Sobic004G141800 Sobic006G077200 Sobic006G077200 Sobic003G405500--Sobic006G077200 Sobic010G059500 Sobic010G059500 Sobic003G405500--Sobic010G059500 Sobic003G314700 Sobic003G314700 Sobic003G405500--Sobic003G314700 Sobic004G260100 Sobic004G260100 Sobic001G214600--Sobic004G260100 Sobic009G247400 Sobic009G247400 Sobic001G214600--Sobic009G247400 Sobic001G214600--Sobic009G084900 Sobic010G147833 Sobic010G147833 Sobic001G214600--Sobic010G147833 Sobic002G317200 Sobic002G317200 Sobic001G214600--Sobic002G317200 Sobic004G223600 Sobic004G223600 Sobic001G214600--Sobic004G223600 Sobic006G234700 Sobic006G234700 Sobic001G214600--Sobic006G234700 Sobic001G219900 Sobic001G219900 Sobic001G214600--Sobic001G219900 Sobic001G493200 Sobic001G493200 Sobic001G214600--Sobic001G493200 Sobic005G110499 Sobic005G110499 Sobic003G189600--Sobic005G110499 Sobic003G189600--Sobic010G185400 Sobic007G218000 Sobic007G218000 Sobic003G189600--Sobic007G218000 Sobic003G189600--Sobic006G077200 Sobic003G394200 Sobic003G394200 Sobic003G189600--Sobic003G394200 Sobic006G224800 Sobic006G224800 Sobic003G189600--Sobic006G224800 Sobic009G249700 Sobic009G249700 Sobic003G189600--Sobic009G249700 Sobic001G308400 Sobic001G308400 Sobic003G189600--Sobic001G308400 Sobic004G322400 Sobic004G322400 Sobic003G189600--Sobic004G322400 Sobic004G236800--Sobic004G141800 Sobic004G236800--Sobic002G430300 Sobic004G236800--Sobic003G405500 Sobic004G236800--Sobic003G152400 Sobic002G063900 Sobic002G063900 Sobic004G236800--Sobic002G063900 Sobic010G278600 Sobic010G278600 Sobic004G236800--Sobic010G278600 Sobic004G246100 Sobic004G246100 Sobic004G236800--Sobic004G246100 Sobic010G187600 Sobic010G187600 Sobic004G236800--Sobic010G187600 Sobic004G236800--Sobic001G145400 Sobic001G369000 Sobic001G369000 Sobic007G120500--Sobic001G369000 Sobic004G039600 Sobic004G039600 Sobic007G120500--Sobic004G039600 Sobic007G132100 Sobic007G132100 Sobic007G120500--Sobic007G132100 Sobic006G012500 Sobic006G012500 Sobic007G120500--Sobic006G012500 Sobic003G057700 Sobic003G057700 Sobic007G120500--Sobic003G057700 Sobic003G249600 Sobic003G249600 Sobic007G120500--Sobic003G249600 Sobic004G072100 Sobic004G072100 Sobic007G120500--Sobic004G072100 Sobic010G053800 Sobic010G053800 Sobic007G120500--Sobic010G053800 Sobic007G120500--Sobic003G394200 Sobic001G393700--Sobic002G430300 Sobic001G393700--Sobic001G145400 Sobic010G099800 Sobic010G099800 Sobic001G393700--Sobic010G099800 Sobic005G114800 Sobic005G114800 Sobic001G393700--Sobic005G114800 Sobic001G393700--Sobic006G224800 Sobic001G103300 Sobic001G103300 Sobic001G393700--Sobic001G103300 Sobic001G393700--Sobic003G405500 Sobic003G240700 Sobic003G240700 Sobic001G393700--Sobic003G240700 Sobic009G045200 Sobic009G045200 Sobic001G393700--Sobic009G045200 Sobic004G357100 Sobic004G357100 Sobic003G152400--Sobic004G357100 Sobic007G042400 Sobic007G042400 Sobic003G152400--Sobic007G042400 Sobic003G152400--Sobic002G430300 Sobic003G152400--Sobic004G223600 Sobic008G098300 Sobic008G098300 Sobic003G152400--Sobic008G098300 Sobic003G152400--Sobic009G084900 Sobic003G152400--Sobic002G063900 Sobic003G152400--Sobic004G246100 Sobic003G152400--Sobic001G145400 Sobic002G308500--Sobic008G124800 Sobic003G233400 Sobic003G233400 Sobic002G308500--Sobic003G233400 Sobic008G099800 Sobic008G099800 Sobic002G308500--Sobic008G099800 Sobic010G228500 Sobic010G228500 Sobic002G308500--Sobic010G228500 Sobic001G404600 Sobic001G404600 Sobic002G308500--Sobic001G404600 Sobic007G019300 Sobic007G019300 Sobic002G308500--Sobic007G019300 Sobic001G137000 Sobic001G137000 Sobic002G308500--Sobic001G137000 Sobic003G312100 Sobic003G312100 Sobic002G308500--Sobic003G312100 Sobic001G426600 Sobic001G426600 Sobic002G308500--Sobic001G426600
Octagon: transcription factors


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