Gene annotation
Transcriptome id Sobic.002G283400.1
Synonym
Functional annotation -
UniProt A0A1B6QDW5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G214600 expressed protein -
2 Sobic.010G147833 - -
3 Sobic.006G083300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K18995: ATP-dependent RNA helicase DHX29
4 Sobic.006G185200 RNA polymerase IV subunit, putative, expressed K16250: DNA-directed RNA polymerase IV subunit 1
5 Sobic.008G140700 RNA recognition motif containing protein, putative, expressed -
6 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
7 Sobic.004G176000 "SDG725(Ortholog in rice:Sui et al., 2012)"(PubMedID : 31659884)@histone-lysine N-methyltransferase ASHH2, putative, expressed -
8 Sobic.004G337800 UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed K11718: UDP-glucose:glycoprotein glucosyltransferase
9 Sobic.003G152400 WD domain containing protein, putative, expressed K17601: WD repeat-containing protein 81
10 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
11 Sobic.003G362000 3-deoxy-D-manno-octulosonic-acid transferase, putative, expressed K02527: kdtA, 3-deoxy-D-manno-octulosonic-acid transferase
12 Sobic.001G542700 expressed protein -
13 Sobic.004G023100 protein binding protein, putative, expressed -
14 Sobic.004G260100 tetratricopeptide repeat, putative, expressed K03255: TIF31, protein TIF31
15 Sobic.009G084900 expressed protein -
16 Sobic.004G236800 MAG2, putative, expressed -
17 Sobic.003G057700 WD domain, G-beta repeat domain containing protein, expressed -
18 Sobic.003G233400 expressed protein -
19 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
20 Sobic.003G074200 actin, putative, expressed K11672: ACTR5, ARP5, actin-related protein 5


Gene co-expression network
sample Sobic002G283400 Sobic002G283400 Sobic001G214600 Sobic001G214600 Sobic002G283400--Sobic001G214600 Sobic010G147833 Sobic010G147833 Sobic002G283400--Sobic010G147833 Sobic006G083300 Sobic006G083300 Sobic002G283400--Sobic006G083300 Sobic006G185200 Sobic006G185200 Sobic002G283400--Sobic006G185200 Sobic008G140700 Sobic008G140700 Sobic002G283400--Sobic008G140700 Sobic007G061700 Sobic007G061700 Sobic002G283400--Sobic007G061700 Sobic004G176000 Sobic004G176000 Sobic002G283400--Sobic004G176000 Sobic004G337800 Sobic004G337800 Sobic002G283400--Sobic004G337800 Sobic003G152400 Sobic003G152400 Sobic002G283400--Sobic003G152400 Sobic004G260100 Sobic004G260100 Sobic001G214600--Sobic004G260100 Sobic009G247400 Sobic009G247400 Sobic001G214600--Sobic009G247400 Sobic009G084900 Sobic009G084900 Sobic001G214600--Sobic009G084900 Sobic001G214600--Sobic010G147833 Sobic002G317200 Sobic002G317200 Sobic001G214600--Sobic002G317200 Sobic004G223600 Sobic004G223600 Sobic001G214600--Sobic004G223600 Sobic006G234700 Sobic006G234700 Sobic001G214600--Sobic006G234700 Sobic001G219900 Sobic001G219900 Sobic001G214600--Sobic001G219900 Sobic001G493200 Sobic001G493200 Sobic001G214600--Sobic001G493200 Sobic010G147833--Sobic001G214600 Sobic010G147833--Sobic004G260100 Sobic001G170100 Sobic001G170100 Sobic010G147833--Sobic001G170100 Sobic007G019300 Sobic007G019300 Sobic010G147833--Sobic007G019300 Sobic001G426600 Sobic001G426600 Sobic010G147833--Sobic001G426600 Sobic003G057700 Sobic003G057700 Sobic010G147833--Sobic003G057700 Sobic003G249600 Sobic003G249600 Sobic010G147833--Sobic003G249600 Sobic007G120500 Sobic007G120500 Sobic010G147833--Sobic007G120500 Sobic001G287500 Sobic001G287500 Sobic010G147833--Sobic001G287500 Sobic009G109200 Sobic009G109200 Sobic006G083300--Sobic009G109200 Sobic004G248600 Sobic004G248600 Sobic006G083300--Sobic004G248600 Sobic001G004400 Sobic001G004400 Sobic006G083300--Sobic001G004400 Sobic007G098500 Sobic007G098500 Sobic006G083300--Sobic007G098500 Sobic001G110600 Sobic001G110600 Sobic006G083300--Sobic001G110600 Sobic001G050600 Sobic001G050600 Sobic006G083300--Sobic001G050600 Sobic002G396500 Sobic002G396500 Sobic006G083300--Sobic002G396500 Sobic006G083300--Sobic001G214600 Sobic001G352900 Sobic001G352900 Sobic006G083300--Sobic001G352900 Sobic002G378100 Sobic002G378100 Sobic006G185200--Sobic002G378100 Sobic004G085000 Sobic004G085000 Sobic006G185200--Sobic004G085000 Sobic008G017100 Sobic008G017100 Sobic006G185200--Sobic008G017100 Sobic006G185200--Sobic001G214600 Sobic009G213200 Sobic009G213200 Sobic006G185200--Sobic009G213200 Sobic006G185200--Sobic010G147833 Sobic006G185200--Sobic004G223600 Sobic006G185200--Sobic004G260100 Sobic001G145400 Sobic001G145400 Sobic006G185200--Sobic001G145400 Sobic001G020000 Sobic001G020000 Sobic008G140700--Sobic001G020000 Sobic001G087600 Sobic001G087600 Sobic008G140700--Sobic001G087600 Sobic010G034100 Sobic010G034100 Sobic008G140700--Sobic010G034100 Sobic003G405500 Sobic003G405500 Sobic008G140700--Sobic003G405500 Sobic003G312700 Sobic003G312700 Sobic008G140700--Sobic003G312700 Sobic008G140700--Sobic003G152400 Sobic008G140700--Sobic006G234700 Sobic002G227500 Sobic002G227500 Sobic008G140700--Sobic002G227500 Sobic010G059500 Sobic010G059500 Sobic008G140700--Sobic010G059500 Sobic008G149800 Sobic008G149800 Sobic007G061700--Sobic008G149800 Sobic002G158700 Sobic002G158700 Sobic007G061700--Sobic002G158700 Sobic004G246100 Sobic004G246100 Sobic007G061700--Sobic004G246100 Sobic003G401000 Sobic003G401000 Sobic007G061700--Sobic003G401000 Sobic006G046700 Sobic006G046700 Sobic007G061700--Sobic006G046700 Sobic001G542700 Sobic001G542700 Sobic007G061700--Sobic001G542700 Sobic008G153000 Sobic008G153000 Sobic007G061700--Sobic008G153000 Sobic001G544200 Sobic001G544200 Sobic007G061700--Sobic001G544200 Sobic004G031700 Sobic004G031700 Sobic007G061700--Sobic004G031700 Sobic004G176000--Sobic001G214600 Sobic004G176000--Sobic001G352900 Sobic001G261900 Sobic001G261900 Sobic004G176000--Sobic001G261900 Sobic010G053600 Sobic010G053600 Sobic004G176000--Sobic010G053600 Sobic004G023100 Sobic004G023100 Sobic004G176000--Sobic004G023100 Sobic004G176000--Sobic004G260100 Sobic004G176000--Sobic001G493200 Sobic006G210000 Sobic006G210000 Sobic004G176000--Sobic006G210000 Sobic007G212300 Sobic007G212300 Sobic004G176000--Sobic007G212300 Sobic001G301200 Sobic001G301200 Sobic004G337800--Sobic001G301200 Sobic004G337800--Sobic010G059500 Sobic004G337800--Sobic009G084900 Sobic004G337800--Sobic003G405500 Sobic009G131300 Sobic009G131300 Sobic004G337800--Sobic009G131300 Sobic004G337800--Sobic001G214600 Sobic004G337800--Sobic002G227500 Sobic006G021700 Sobic006G021700 Sobic004G337800--Sobic006G021700 Sobic008G124800 Sobic008G124800 Sobic004G337800--Sobic008G124800 Sobic004G357100 Sobic004G357100 Sobic003G152400--Sobic004G357100 Sobic007G042400 Sobic007G042400 Sobic003G152400--Sobic007G042400 Sobic002G430300 Sobic002G430300 Sobic003G152400--Sobic002G430300 Sobic003G152400--Sobic004G223600 Sobic008G098300 Sobic008G098300 Sobic003G152400--Sobic008G098300 Sobic003G152400--Sobic009G084900 Sobic002G063900 Sobic002G063900 Sobic003G152400--Sobic002G063900 Sobic003G152400--Sobic004G246100 Sobic003G152400--Sobic001G145400
Octagon: transcription factors


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